mRNA_Ecto-sp13_S_contig1026.279.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 478 bits (1231), Expect = 4.520e-158 Identity = 284/424 (66.98%), Postives = 296/424 (69.81%), Query Frame = 1 Query: 34 MVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIEREQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDLAELPPDSDANVN---------------------GEGG-----------------AVQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRRGGA 1191 MVHAIRPSARVPEKK CVTTMRTVKK MME+VSRLIE EQVCITSDGWTSCANDT+MSLT TL+ SAWKLVTLSVDCSKSEGTTTGDALAAGIKA +AKHGLTGKVTAVTTDCEPSMVKMGRLL GDAT ST IGCCN+RLEST+SIVF+GP VKKVMVLARGLVTRY TS AADRLKQFVKTYLGV NKRVIQDVVT GSLVVPFI+DLRNSLEDAI+DL ELPPDSDANVN G+G V VLATALDPRTKI YGVDEDEKADVWKLVQEE VKIAVETRNAENSQ SSQQGPEAAAGPA S TSAG E+SSRKRPR GG+ Sbjct: 1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT----------------------------------------------------------------GSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENSQRTSSQQGPEAAAGPALSSTSAGAEESSRKRPRVGGS 360
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 326 bits (835), Expect = 4.790e-102 Identity = 212/522 (40.61%), Postives = 294/522 (56.32%), Query Frame = 1 Query: 25 FKAMVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIEREQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDLAELP----------------PDSDA------NVNGEGGAV-----------------QVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPR----------RGGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERL 1443 F A+V + AR P ++A V MR +KK++ +V+ +++ E V IT+DGWTS +N+++MSLT+ + W+L LS++C+K G+T G+ LA I + + +HGLTG+VTA TDCEPSMVK GRLLE + HIGC NHR+ESTTS VF+G + + AR +V RY S + RL F+ L + V+QDV TRW S+ +M RL+ L +HE+ D + P+LS DW VL++I P+L PF Q LEG KYVTGS+ VP I +LRN LE AI DL PD++A N G+G ++ QV ATA+DPR K LYG+ + E A VW+ V + V IA E +++N+ A+S P AA P +P A Q + KR R GA G + + V +E+ +F+ + GI ++ +G KVY DPLDWWR R FPHL L+RRVLAIP++QA SER+ Sbjct: 34 FHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGI-LKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNT--ATSGSAP--AAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 320 bits (820), Expect = 1.400e-99 Identity = 221/554 (39.89%), Postives = 303/554 (54.69%), Query Frame = 1 Query: 34 MVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIEREQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDLAELP----------------PDSDA------NVNGEGGAV-----------------QVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSA-----GTEQSSRKRPRRGGARTPQLGEG----------AGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGT---KVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLLR 1524 MV A+ A+VP ++ ++ MR VK ++ +V+ +++ E V IT+DGWTS N+++MSLT+ + WKL LS+DC+K GTTTG+ LAA + + +H LTG+V A TDCEPSM+K GRLLE D + +HIGC NHR+ESTTS VF+G + + LAR LV RY S A RL Q L + V+QDV TRW ST +M RL+ L +HE+ D++ PLLS DW VL++I P+L PF Q LEG +YVTGS+ + + +LR LE AI DL + PD++A N G+G + QV ATALDPR K LYG+ + E A VW+ V V IA+ +HA + P +A PAS P G Q + KRPR + + V +E++AFK + GI++++ K T KV+ +PLD WR + +P L L+RRVLAIP++QA+SER+FS AG VT R+ L VE LV LR Sbjct: 1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGI-LQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIAL-------GKHAGDK-APASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLR 544
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 300 bits (769), Expect = 6.370e-93 Identity = 206/528 (39.02%), Postives = 282/528 (53.41%), Query Frame = 1 Query: 7 MLADKSFKAMVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIEREQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDL-----------AELPPD---SDANVNGEGGAV--------QVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRRGGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLLR 1524 M+ ++ F MV ++ A VP K+ + +R +KK + ++V + E V +TSDGWTS +NDT+M T T ++S + LV L V+C K G TTG+ L +KA +A++GLT + A TTDCEPSMVK GRLLE + G TH+GC HRLES TS F GPGV K + LAR +VTRY S A+DRL+Q ++ + V K+V+QDV TRW ST + RL+ L P T HE D + PLL DW VL+++ P+ +PF +Q E K VT SLV+P+I DLR+ L++A+E L AE D + +V V QVLATALDPR+K LYG++E E +DVW+ V E VK+A+E + E++Q A GA SS + VE A + P D + + AN T+ RVL IPA+Q +SER+FS AG +VTK R + P VE ++ LR Sbjct: 1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLE-ENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQ-MRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIVEPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSA-----------------------------------------GASSSL-------IPVEPAAXXXXXXXXXXDFAAASAV----PGD--KQQSANASSSTS---RVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLR 469
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 294 bits (753), Expect = 3.180e-86 Identity = 207/542 (38.19%), Postives = 273/542 (50.37%), Query Frame = 1 Query: 148 EQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDL-----------AELPPD-------------------SDANVNGEGGA--------VQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAEN---------------------------------------------SQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRRGGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLLR 1524 E V +TSDGWT +NDT+MS T T ++S + LV L ++C K T G+ L +KA +A++GLTG+ A+TTDCE SMVK GRLLE + G TH+GC HRLES TS F GPGV K + LARG+VTRYT S A+DRL+Q V + V K V+QDV TRW ST RLI L P T HE D PLL DW VL+++ +L+PF Q LE K VT LV P+I DL++ L++A+E L AE D +D V EG QVLATAL PR+K LYG++E E +DVW E VK+A+E + E+ +Q A + P PA Q + S + + + E+ AFK++ G+ + E+K G +V PL+WWRV+ +P L +L+RRVL IPA QA+SER+FS AG +VTK R + P V +V LR Sbjct: 4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLE-ENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQ-VCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSP-IPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEK-GQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLR 541
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 271 bits (694), Expect = 3.550e-84 Identity = 155/207 (74.88%), Postives = 160/207 (77.29%), Query Frame = 1 Query: 940 VQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRR------------GGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLLR 1524 VQVLATALDPRTKILYGVDEDEKADVWKLV+EE VKIAVETRN+ENSQ ASSQQGP GGARTPQL EGA SS LIT+SVRVELTAFKVSTGIKMYEEDKEG KVYLDPLDWWRVRCA+FPHL NL+RRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVE LVLLR Sbjct: 78 VQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLR 284
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 226 bits (575), Expect = 2.260e-65 Identity = 145/347 (41.79%), Postives = 192/347 (55.33%), Query Frame = 1 Query: 181 SCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDL-----------AELPPD-------------------SDANVNGEGGA--------VQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGP 1107 S +NDT+M+ T T ++S + LV L ++ K G TTG+ L +KA +A++GLTG+ A TTDCEP MVK GRLLE + G +H+GC HR ES TS F GPGV K + L RG+VTRYT S A++RL+Q + V K+V+QDV TRW ST D + PLL+ DW VL+++ P+L PF Q LE K VT SLV +I DLR+ L++AIE L AE D +D V EG QVLATALDPR+K LYG++E E +DVW+ V E VK+A+E + E++Q A + P Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLE-ENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDI-VQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSP 331
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A671UN90_SPAAU (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN90_SPAAU) HSP 1 Score: 158 bits (400), Expect = 7.280e-39 Identity = 146/532 (27.44%), Postives = 239/532 (44.92%), Query Frame = 1 Query: 1 VQMLADKSFKAMVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIE--REQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGL-TGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIE--------LEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDL------AELPPDSDA------NVNGEGGAVQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRRGGARTPQLGEGAGSSTTSLITNSVRVELTAFK--VSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLL 1521 + M+ D+ FK M++ P +P + M ++ ++ +++ + ++ +T+D WTS A + ++ +T ++ W+L + + E TG +AA I+ A+A+ + + AV D ++V +L+ + G + C H L+ S P + K + AR LV + S A+ +LK K +G+ K++IQDV TRW+ST M RL+E L PT LD L WA+L+ + L+ F + L G YVT S + P + L+ S + E A ++ A V + Q++A ALDPR + L + +E+ V VQ +A ++ E ++ + + E+ TS G+ S G SST S +S E A ++ + MY + +K +PL WW+ A +P L +L+R L IPAT SERLFS AGNI +K R +L P V+ L L Sbjct: 29 ISMVEDEGFKQMINTFHPGYTLPSRTHFTKLMEEKYEAAAAKIIDVLKLTKSKIALTADAWTSVATEAYLGITCHFISDDWELTSFCLTTMPLEERHTGVNIAAWIEHAIARFQVPASNIVAVVHDNGSNVVLAANILK-EKRGWNSVCCAGHTLQLVISHALKHPQITKALGAARCLVEHFKRSELASSKLKTKQKQ-MGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPLTATLSDPTVTPRGKQHLD--LKPDQWALLEELAKALQAFESATVYLSGETYVTVSALPPLVRGLQKSTQTTYETAPVQAFQAAASQETTACWSREVTVKDDSPDTQIIAAALDPRFRKLKFLTPEERFSVQSKVQ----SLASQSMQEETAKKQCATENEESIT--CFKRTSNGSLDSL---------------FGCDSSTDS---DSETAEQYAQNQAITNEVLMYFGEHPLSKTE-NPLSWWKSNEAKYPSLASLARSFLCIPATSTPSERLFSAAGNITSKKRASLIPEHVDMLTFL 531
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A669CH32_ORENI (BED-type domain-containing protein n=4 Tax=Ovalentaria TaxID=1489908 RepID=A0A669CH32_ORENI) HSP 1 Score: 158 bits (399), Expect = 2.930e-38 Identity = 148/530 (27.92%), Postives = 234/530 (44.15%), Query Frame = 1 Query: 25 FKAMVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIER--EQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAK-HGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIE--------LEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLR-------------NSLEDAIED--LAELPPDSDANVNGEGGAVQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSA-----GTEQSSRKRPRRGGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLL 1521 FK M+ +P +P ++ + M T ++ +E++ +++ ++ +T+D WTS ++++ +T + W L++ ++ E T + LAA ++ K H V A+ D ++V +L+ + G C H L+ + P + K + ARGLV S A+ +LKQ K +G ++IQDV RW+S+ M RL+E L P LD L W +L + VL+P+ +L G+ YVT S++ P + L NS ++ E+ L+ P+ A +G V ++A ALDPR + L + ++ + VQ E + + E R+ QH G EA+A P + S GT+ T Q G+G +VR E+ + G D DPL WW+ FP L NL++ LA+PAT SERLFS AGNIVTK R +L VE L L Sbjct: 125 FKEMLTTFQPGYTLPSRRHFTSMMETKYETSVEKLRNELKKATSKISLTTDAWTSLVTESYLGVTCHFINDNWDLLSFNLATLPVEERHTAENLAAWVEKVAEKFHISLHNVLAIVHDNASNIVAALHILK-EKFGVVSYRCAGHTLQLVVNHALKDPKIDKALSAARGLVKHIRKSEPASTKLKQKQKQ-MGTAEHKLIQDVAVRWNSSYYMIERLLEQRWPVVATLSDPEVTQRGKQYLD--LKNDQWILLDELKEVLKPYEQATNVLSGQSYVTVSVLPPLLKGLLKSTQNKSFDSAAVNSFQNCAEEEILSRWQPEVSA-FQADGKNVSLIAAALDPRFRKLKFLSPEDALKLQVRVQREALDLKREQRSQLQQQHV----GQEASASPPTKKRSVLDTLLGTDSEEEDC----NENTDQGGDGEN--------EAVRKEVLLYF---GEAPIPRDN-------DPLTWWKNNATRFPTLANLAKSYLAVPATSTPSERLFSVAGNIVTKKRASLTAEHVEMLTFL 623
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A3B1JJI0_ASTMX (Zinc finger BED domain-containing protein 1-like n=2 Tax=Clupeocephala TaxID=186625 RepID=A0A3B1JJI0_ASTMX) HSP 1 Score: 137 bits (345), Expect = 5.010e-31 Identity = 140/519 (26.97%), Postives = 244/519 (47.01%), Query Frame = 1 Query: 25 FKAMVHAIRPSARVPEKKACVT-TMRTVKKSMMEQVSR-LIEREQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTA--VTTDCEPSMVKMGRLLEGDATG-STHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELE--VPTTMHEAADKLDP----LLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIED---LAELPPDSDANVNGE---GGAVQVL--ATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRRGGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLLR 1524 FK ++ + P +P + T + ++ + E V R L E + IT+DGWTS A ++++++T V + W++ + + + T D LA ++ A+ + L + T VTTD ++V +A G S HIGC H + + + +++ R +VT + S AA LK + L + ++IQDV TRW+S+ M R +E + V + + E K + LS D VL+ ++ VL+P + TLL + T S+++P H + +++ + D + ++ N+ G Q L +TALDPR K L +D+ + +++ + E++++ +H + G + P P +A + + S A+ L E G ++ T EL V I++Y K V +PL WW+ +P+L+ LS+ LA+ AT SER+FS AG+IVT R L+P V+ L+ L+ Sbjct: 131 FKHLISVLEPRYSIPSRSHLTTKVLPSMYEDTKENVLRGLSNAELIAITTDGWTSRATESYITVTAHYVNNEWEIESPVLQTRPIYESHTSDNLAEVLQEAVLEWKLDRQNTTIPVTTDNAKNIVNAS-----NAAGLSPHIGCFAHTVNLASQKGLGVNQISRLLGKVRRVVTFFHKSTTAAAVLKA-KQEMLQLPPHKLIQDVATRWNSSYDMLTRYLEQQAAVYSALTEKDVKKNAKDLITLSDQDVTVLEDVVEVLKPMKTITTLLSSEQQPTVSMILPLKHSILTAMKHSGTDSQIVKDVKSAIATNIEGRYSNPSLQQFLNESTALDPRFKSLPHLDDPSRKEIFNNLAEKIIQ-----------RHPTQDPGQGTSQNPPEDPETAASSEGSPP------AKRTTLSELFGDFYSTAPTTPTTPELWPDVVKEEIELYRMAKV-ISVDANPLKWWKNNEHQYPNLSKLSKHYLAVQATSVASERVFSTAGDIVTAQRAALSPDNVDILIFLK 625 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1026.279.1 >prot_Ecto-sp13_S_contig1026.279.1 ID=prot_Ecto-sp13_S_contig1026.279.1|Name=mRNA_Ecto-sp13_S_contig1026.279.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp MLADKSFKAMVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIEREQVback to top mRNA from alignment at Ecto-sp13_S_contig1026:4207..5877- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1026.279.1 ID=mRNA_Ecto-sp13_S_contig1026.279.1|Name=mRNA_Ecto-sp13_S_contig1026.279.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1671bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1026:4207..5877- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1026:4207..5877- >mRNA_Ecto-sp13_S_contig1026.279.1 ID=mRNA_Ecto-sp13_S_contig1026.279.1|Name=mRNA_Ecto-sp13_S_contig1026.279.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=546bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1026:4207..5877- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |