mRNA_Ecto-sp13_S_contig10257.277.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 810 bits (2091), Expect = 1.510e-280 Identity = 418/507 (82.45%), Postives = 429/507 (84.62%), Query Frame = 1 Query: 31 NGTFEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGG-------------------------------------------------------------------AGERRIYVFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVPARFRRGKFLFRGGV 1350 NGTFEAVCDGCRVACD CSFDE PAVPTCSDVMDHGTSTGG VTLETLSIDPGYWR T SSKEILPCYNADACLGG AGERR+YV ERLGWYVPLQSVKIV+VSWQI+TQFASAANVVYPGVYQQFLDGLKVFGFDLGWL+SAGCV DM FHGRLLAATIGPI AVLLLAGTYAAATR+NREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELE+GKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIP+LYSILLF+DREVLKKDK DRD+SARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVS+YVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLW RRLRED+PARFRRGKFLFRGGV Sbjct: 924 NGTFEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWTRRLREDLPARFRRGKFLFRGGV 1430
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 808 bits (2087), Expect = 3.390e-279 Identity = 418/509 (82.12%), Postives = 431/509 (84.68%), Query Frame = 1 Query: 25 SGNGTFEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGG-------------------------------------------------------------------AGERRIYVFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVPARFRRGKFLFRGGV 1350 SG+GTFEAVCDGCRVACD CSFDEQPAVPTCSDVMDH TS GGNVTLETL IDPGYWR T SSK+ILPCYNADACLGG AGERRIYVFERLGWYVPLQSVKIV+VSWQIVTQFASAANVVYPGVYQQF+DGLKVFGFDLGWLLS GCV DMDFHGRLLAATIGPI AVLLLAGTYAAATR+NREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELE+G NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDK DR++SARVKSTSELWQPYKPSVFYYEVIECGRR+LLTGI+VFIYPNTAAQLAITLMMAFFFALLSEA+SPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWR++LREDVPARFRRGKFLFRGGV Sbjct: 982 SGDGTFEAVCDGCRVACDGCSFDEQPAVPTCSDVMDHSTSPGGNVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDG-NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRQKLREDVPARFRRGKFLFRGGV 1489
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 535 bits (1377), Expect = 5.530e-178 Identity = 270/503 (53.68%), Postives = 345/503 (68.59%), Query Frame = 1 Query: 40 FEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGGAGERRIY-------------------------------------------------------------------VFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA-GLW-RRRLREDVPARFRRGKFLFR 1341 +EA+CDGC V C+ CSF+E VP CSD ++H S+GG VTL+ L I+PGYWR TPSS+ +L CYNADACLGG Y V ER G +VPLQSVKIV+V+WQI+TQF S AN+ +P VYQ+FLD L++F FDLGW+LSAGCVFD+DFH RLL +TI PI+ +L LA YAAA R + ++E L+ +W KHV + LLLTFLVY+SVS+ LF+TFAC+EL++ KNYLR DYRIECDS KH FQVYAGFMI+LY +GIP LY LFRD +VL++D+ DR+ AR+ T++LW+PY+PSVFYYEVIEC RR+LL G+VVFIYPNTAAQ+A+ L++A FA++SEA++PY+SRW+TW+ RMGH VVAVS+YVALLLKVDVSDERA SQ VFE++LV H CM+ V++E + A LW +R ++ + FRRG+ +FR Sbjct: 477 YEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQPASSSFRRGRGIFR 979
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 536 bits (1381), Expect = 5.170e-174 Identity = 285/505 (56.44%), Postives = 343/505 (67.92%), Query Frame = 1 Query: 40 FEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGG-----------------------------------------------------------------AGE----RRIYVFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWR--RRLREDVPARFRRGKFLFR 1341 FEA+C+GC CD C F E P C++VMDH TS GGNVTL+TLSID G+WR + SS E+L CY+ADACLGG +GE R+ + E + Y+PLQS+KIV+VSWQI+TQF S ANV YP VYQ LD L VF FDL WLLSAGCV DM+FHGRLL +TI PI+A+LLLA TYAAA R+NR EKL IIW+KHV V LLLTF VYSSVSSTLF+ FACD+L+ K+YLR DY IEC+SS+H+ QVYAGFMI++Y +GIP LY+ LLF+ R+VLK + DR+ RVKS S LW+PYKP+VFYYEVIEC RR+LL G+VVFIYPNTAAQ+A+TL++AF FALLSE ++PY+SRW+TW++R+GH+VV +S+YVALLLKVDVSDERA SQ VFE+VLV VH CMIL V+VE V A R RR RFR GK L R Sbjct: 1010 FEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGKSLTR 1514
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 523 bits (1346), Expect = 2.370e-173 Identity = 278/496 (56.05%), Postives = 334/496 (67.34%), Query Frame = 1 Query: 25 SGNGTFEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGGAGERRIYVFE----------------RLGW---------------------------------------------------YVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVPA 1311 SG+ EA C GC+ CD C + P VP CSDV+ H S GG VTLETLSIDPGYWR T SS E+L CYN DAC+GG Y E +LG+ Y+PLQ++KI+VV+WQIVTQF SAANV YP VYQ+FL+GL VF FD+ W+LSAGCV D+DFH RLL +TIGPI+A+L LA TY A +R+NR L+++WD+HV + LLL FLVYS VSS +F+TFACD+LE G YLR DYRIECDSSKH+ F+VYAGFMILLYP+GIP Y LL RDR+VL+KD D R++ RV S S LWQPY+PSV+YYEVIECGRRILLTG+VVFIYPNTAAQ+AITL+M FA+LSEA+ PY+ W+TWV+R+ H VV +SVYVALLLKVDVS+E+ SQ VFEAVLV HACMIL+VVVET ++ G R +D PA Sbjct: 515 SGDALDEA-CSGCQTTCDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVET-ILLGCPSRVKEQDEPA 1006
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 522 bits (1345), Expect = 9.640e-168 Identity = 274/489 (56.03%), Postives = 333/489 (68.10%), Query Frame = 1 Query: 40 FEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGG----------------------------------------------------------------AGERRIY---VFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLK-KDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLRED 1302 FEAVC+GC+ AC C+F + VPTC+D+++H TS+ G TLETLSI GYWR T S E+L CY+ADACLGG +GER + ER+G Y+PLQSVKIVVV+WQI+TQF + ANV YP VYQ FL+GL+VF FDL W+LSAGCV D+DFH RLL ATIGPI A LLL TYAAA R++R A E L + KHVF+ LLLTF VYSSVS+TLF+TFAC+ LE+GK YL DYRIECDSSKHK F+VYAGFM+LLY GIP LYS LLFRDR+VLK ++ +D +R STS+LW+PYKPSVFYYEV+EC RR+LL G+VVFIYPN++AQ+AITL++AF F L+SE ++PY+SRW+TW+NRMGHVVV S+Y+ALLLKVDVS ER+ SQ VFEAVLV H M++ V ET V+A R R D Sbjct: 1111 FEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRD 1599
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 516 bits (1330), Expect = 2.850e-163 Identity = 272/501 (54.29%), Postives = 332/501 (66.27%), Query Frame = 1 Query: 43 EAVCDGCRVACDRCS-FDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGGA-------------------------------------------------------------------GERRIYVFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVPARFRRGKFLFR 1341 EA CDGC+ CD F+E P VP C+ M+H S GG + L +D G+WR TP + ++LPCYNA+ACL G GE ERLG Y+PLQS KIVVVSWQI+TQF + ANV YP VYQ+FLDGL VF FDL W+LSAGC+ +DFH RLL +TIGPI+A+L L TYAAATR+NR A E L++IW++HV + LLLT VYSSVSSTLF+TFAC+ L +G+ YLR DYRI CDSSKHK QVYAG M+++Y +GIP LY +LLFRDR+VLK+ DR+ +ARV STSELW+PYKPSVFYYEVIECGRR+LL G+VVFIYPNTA Q+AITL+MAF F ++SE ++PY+SRW+TW++RMGH VV VS+YVALLLKVDVS+ER +SQ VFE VLV HACMIL +V+ET V+ R+ RF K LFR Sbjct: 1567 EAACDGCQTPCDDDGCFEEPPLVPICALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGPALRF--WKALFR 2065
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 489 bits (1259), Expect = 4.120e-158 Identity = 238/368 (64.67%), Postives = 294/368 (79.89%), Query Frame = 1 Query: 244 ACLGGAGERRIYVFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVPARFRRGKFLFRGG 1347 A G G+ R V RLG Y+PLQSVKIV+V+WQI+TQF S ANV YP VY++FLDGL VF FDL W+LSAGC+FD+DFH RLLA+T+ P++ +L LAGTYAAA +NR E L++IW+KHV + LLLTFL+YSSVS+TLFK F C+ELE+G NYLR DY I+CDSSKHK FQVYAGFM+++Y +GIP LY+ LLFRDR VLK DR+ +AR STS+LW+PYKPSVFYYEVIECGRR+LL G+VVFI+PNTAAQ+AITLMMAF F ++SE ++P++S+W+ W+NR GH VV VS+Y+ALLLKVDVS ERA SQ V+E VLV HACMIL+V+ ETFV+ + R++ RFR GK LFR G Sbjct: 891 AMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTRFRHGK-LFRSG 1257
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 477 bits (1227), Expect = 7.200e-151 Identity = 252/496 (50.81%), Postives = 314/496 (63.31%), Query Frame = 1 Query: 22 QSGNGTFEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGGAGERRIYVFERL---------------------------------------------------------------GW------YVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLRED 1302 Q + FE +C GC V C+ C FDE VP C++VM+H TS GGN+TLE LSID GYWR T SS+++L CY+A+ACLGG Y E GW Y+PLQSVKIV+ +WQI+TQF S ANV YP VY+ FL L +F FDLGW LS C DMDFH RLL +TI PI A+L LA TY A + R + L + KH + LLLTF VYSSVSS LF++FAC+EL + K YLR+DYRIECDSSKHK FQVYA FMIL+Y +GIP LY+ LLFRDR++LK+D R + RV S ++LW+PY FYYEVIECGRR+LL G+VVFIYPNTAAQ+A+TLM+AF F ++SEA++PY S W+ W+NRMGHVVV S+++ LLLKV+VSDE SQ VFE VLV VHA M++++VVET V+ R L+++ Sbjct: 1115 QQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEVMEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVVLFFQLRAELKKE 1610
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 466 bits (1199), Expect = 1.330e-149 Identity = 248/493 (50.30%), Postives = 308/493 (62.47%), Query Frame = 1 Query: 40 FEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGGAGERRIY---------------------------------------------------------------------VFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRI-IWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVP 1308 FEAVC GC + CD C F++ P CS+VM H TSTGGN TL+ +SID GYWR T S+E+L C+ ADACLGG Y + ER+ ++PLQSVKIV+VSWQI+TQF S ANV YP VYQ FLD + VF FDL W+ S GC+FD+DFH RLL +TI P++A+ LA T AA R NR + + L+ +W KHV + LLLTFLVYS+VSS LF++FAC+EL +GKNYLR+DYRIECDSS HK FQVYAGFMI+LYP+GIP LY+ LLFRDR+VL+KD+ +R++ RV STS LW+PYKPS FYYE+ A+TL++A F +LSEA+ PYSSRW+ W +RMGH+VV VS+YVALLLKVDVSDERA SQ VFEA+LV VHACM+ VVVET +++ R + P Sbjct: 727 FEAVCAGCDIVCDGCVFEQGLVGPACSEVMAHSTSTGGNTTLQEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEGYEGPYCSICSGGYTKQLGFSCTKCSENKAGGIVVXXXXXXXXXXXXXXXXSYIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACTNAAVARTNRGSPQNLQNNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPYKPSAFYYEI------------------------AVTLVIAVAFTILSEALDPYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAP 1195 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10257.277.1 >prot_Ecto-sp13_S_contig10257.277.1 ID=prot_Ecto-sp13_S_contig10257.277.1|Name=mRNA_Ecto-sp13_S_contig10257.277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=451bp MFRLVVSQSGNGTFEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGback to top mRNA from alignment at Ecto-sp13_S_contig10257:1369..3375+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10257.277.1 ID=mRNA_Ecto-sp13_S_contig10257.277.1|Name=mRNA_Ecto-sp13_S_contig10257.277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2007bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10257:1369..3375+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10257:1369..3375+ >mRNA_Ecto-sp13_S_contig10257.277.1 ID=mRNA_Ecto-sp13_S_contig10257.277.1|Name=mRNA_Ecto-sp13_S_contig10257.277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1353bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10257:1369..3375+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |