mRNA_Ecto-sp13_S_contig10232.259.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 621 bits (1601), Expect = 4.760e-220 Identity = 305/323 (94.43%), Postives = 313/323 (96.90%), Query Frame = 1 Query: 223 MEFRRRSATSSFGLALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191 MEFRR+SATSSFGLALLGLLA+TT AAAADTASPNDPISKPDCDSDIEVSIRYAGTT RLYLESADGETRGGC TLGQIWE+RAGKAPLYAVDPDSGDVSET TGTWLLTEELYVEDGITLKVYGTD GGDADELRLLSTS+TYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTD+DETCEGNAKNTMGEARMDIE+SEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG + S+R N Sbjct: 1 MEFRRKSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG--IIASKRCN 321
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE) HSP 1 Score: 593 bits (1528), Expect = 1.270e-211 Identity = 291/317 (91.80%), Postives = 302/317 (95.27%), Query Frame = 1 Query: 223 MEFRRRSATSSFGLALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTV 1173 MEFRR SATSSF LALLGLLAAT RAAAADTASPNDPISKPDCDSDI VSIRYA +T RLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDP+SG+ SE TGTWLLTEELYVEDGITLKVYGT GGDADELRLLST+DTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISA+SEI+TD+DETCEGNAKNTMGEARMDIE+SEIGYLGFQDSESYGLTWKVRGFCKDKSNP IFD+VNVYGNMYDSDIHH+RFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNG HGE + Sbjct: 1 MEFRR-SATSSFCLALLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHGEAVM 316
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 526 bits (1356), Expect = 6.860e-183 Identity = 263/324 (81.17%), Postives = 284/324 (87.65%), Query Frame = 1 Query: 223 MEFRRRSATSSFGLALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESAD-GETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191 ME RR +A LAL+GLLAAT+ SDI VSIRYAGTTARLYLESAD G TRGGCVTLGQIWE+RAGK PLYAVDPDSG+VS +ATGTWLLTEELYVEDGITLKVYG++AGGDADELRLLST++T+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISA+SEI+TD+DETCEGNAKNTMGEARMDIESSEIGYLG+ DSESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH+ FGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG + S+R N Sbjct: 1 MELRRSAA-----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG--IIASKRCN 317
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 518 bits (1335), Expect = 2.680e-181 Identity = 259/324 (79.94%), Postives = 282/324 (87.04%), Query Frame = 1 Query: 223 MEFRRRSATSSFGLALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESAD-GETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191 ME RR +A LAL+GLLAAT+ DI VSIRYA +TARLYLESAD G TRGGCVTLGQIWE+RAGK PLYAVDPDSG+VS +ATGTWLLTEELYVEDGITL+VYG++AGGDADELRLLST++T+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISA+SEI+TD+DETCEGNAKNTMGEARMDIESSEIGYLG+ DSESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH+ FGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG + S+R N Sbjct: 1 MELRRSAA-----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXXDIAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG--IIASKRCN 317
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: D8LHA2_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA2_ECTSI) HSP 1 Score: 510 bits (1313), Expect = 8.030e-180 Identity = 253/271 (93.36%), Postives = 261/271 (96.31%), Query Frame = 1 Query: 223 MEFRRRSATSSFGLALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYG 1035 MEFRRRSATSSFGLALLGLLA+TT AAAADTASPNDPISKPDCDSDIEVSIRYAG T RLYLESADGETRGGC TLGQ+WE+RAGK PLYAVDPDSGDVSET TGTWLLTEELYVEDGITLKVYGTD GGDADELRLLSTSDTYINLRA+GGSLDFVGTKVFSWDTSTNSPD ETDGRSYISAVSEIVTD+DE+CEG+AKNTMGEARMDIE+SEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYT G Sbjct: 1 MEFRRRSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGNTKRLYLESADGETRGGCATLGQVWESRAGKGPLYAVDPDSGDVSETQTGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSDTYINLRAYGGSLDFVGTKVFSWDTSTNSPDVVETDGRSYISAVSEIVTDEDESCEGHAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTDG 271
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 490 bits (1261), Expect = 1.300e-168 Identity = 235/309 (76.05%), Postives = 266/309 (86.08%), Query Frame = 1 Query: 265 ALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191 AL+G+LA AA DT SPN+PI KP+CD I VSIRY+ RLYLESAD +TRGGCVTL QIWE++ G+APLYAVD SGD+S++ATGTWLLTEEL+VEDGITLKV+GT AGGDADELRLLSTSDT+INLRAHGGSLDF+ TKVF+WDTS N PD DE DGRSY+SAVSE++TD +TC G AKN MGEARMDIE SE+GYLG+ SESYGLTWKVRGFC DKSN ++F+DVNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVY+NGYHG + S+R N Sbjct: 9 ALVGILALKL-AAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHG--IIASKRCN 314
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 468 bits (1203), Expect = 3.360e-160 Identity = 218/284 (76.76%), Postives = 250/284 (88.03%), Query Frame = 1 Query: 340 KPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191 KPDCDS I VS+RY +ARLY+ESA+G TRGGCVTL QIWE + +PLYAVDP SGDVS +ATGTWLLTEE+YVEDGITL+V+G AGGDADELRLLSTSDT+I+LRA+GGSLDF+ TKVF+WDTS N+PD+DE+DGRSYISAVSE++TD +TC G AKN MGEARMDIE+SE+ YLG+ +E+YGLTWKVRGFC DK NPE+FDDVNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEV+NNGYHG + S+R N Sbjct: 7 KPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHG--IIASKRCN 288
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 435 bits (1119), Expect = 4.680e-147 Identity = 214/292 (73.29%), Postives = 245/292 (83.90%), Query Frame = 1 Query: 265 ALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEV 1140 A++ LLAA A AA+T+S N ISKP C S +VSIRY+ ++ RLYLESADG+TRGGCVTL +IW++ G APLYAV P SGDVS +ATGTWLLTE+LYVEDGITL+V+GT AGG+A+ELRLLSTS +INLRAHGGSLDFV TKVF+WDTS N D + RSYISAVSEI+TD E C+G AK TMGEARMDIE SE+ YLG+Q SESYGLTWKVRGFCKD SNPE+FD+VNVYGN+YDSDIHH FG+YTYGH+QGDWRRNKMH N YGFDPHDDSDFLTIHDN+V Sbjct: 12 AIVSLLAARG-ADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKV 302
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 438 bits (1127), Expect = 5.330e-147 Identity = 217/307 (70.68%), Postives = 245/307 (79.80%), Query Frame = 1 Query: 310 DTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAG------KAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLST-------SDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191 DT SPN PI KP+C+S VSIRY+ TT RLYLE+ RGGCVT+ QIWE R G KAPLYAVDP SG+ S+ TGTWLL E+LYVEDGITLKV+G +GG ADELRL ST + TYINLRAHGGSLDF TKVF WDT+ NS D DETDGRSYISAVSEIV D +TCEGNAKNTMGEARMDI +SE+GY+GF DSESYGLTWKVRGFCKDKSNPE+FD VNVYGN+YDS++HH+ F +YTYGHQQGDWRRN +H NSGYG+DPHDDSDFLTIHDN VY+N +HG + S+R N Sbjct: 102 DTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHG--IIASKRCN 406
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 433 bits (1114), Expect = 2.420e-146 Identity = 218/309 (70.55%), Postives = 247/309 (79.94%), Query Frame = 1 Query: 265 ALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191 A++ LLAA A AA+TAS N I+KP C S +VSIRY+ T+ RLYLESADG TRGGCVTL IW + G APLYAV P SGDVS + TGTWLLTE LYVEDGITL+V+G AGG ADELRLLSTS +INLRAHGGSLDFV TKVF+WDTS N D++ GRSYISAVSE++TD + C+G AK MGEARMDIE SE+ YLG+ SESYGLTWKVRG C+D SN E+FD VNVYGN+YDSDIHH FG+YTYGH+QGDWRRNKMH N+ YGFDPHDDSDFLTIHDNEVYNNG HG + S+R N Sbjct: 9 AVMTLLAARG-ADAANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHG--IIASKRCN 314 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10232.259.1 >prot_Ecto-sp13_S_contig10232.259.1 ID=prot_Ecto-sp13_S_contig10232.259.1|Name=mRNA_Ecto-sp13_S_contig10232.259.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=397bp MLPDATLPLATDLSLLSLPHRHTHTPPFGRKPFGSDPLHKLFNSAPFFGLback to top mRNA from alignment at Ecto-sp13_S_contig10232:35..3378- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10232.259.1 ID=mRNA_Ecto-sp13_S_contig10232.259.1|Name=mRNA_Ecto-sp13_S_contig10232.259.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3344bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10232:35..3378- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10232:35..3378- >mRNA_Ecto-sp13_S_contig10232.259.1 ID=mRNA_Ecto-sp13_S_contig10232.259.1|Name=mRNA_Ecto-sp13_S_contig10232.259.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1191bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10232:35..3378- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |