mRNA_Ecto-sp13_S_contig1023.255.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1023.255.1 vs. uniprot
Match: A0A6H5KMW9_9PHAE (Vacuolar protein sorting-associated protein 35 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMW9_9PHAE) HSP 1 Score: 944 bits (2440), Expect = 0.000e+0 Identity = 481/486 (98.97%), Postives = 484/486 (99.59%), Query Frame = 1 Query: 1 MEDPAAQQRALAEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGSVDDSVEFFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSERLKLELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGFEPLTGGRPARRDLPLECIEALLRLLSIPLKSLGLGVLSLAEYVDLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPILKDPPNGERGDGDAAMQ 1458 MEDPAAQQRALAEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGSVDDSVEF VLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPP+LEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSER KLELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGFEPLTGGRPARR+LPLECIEALLRLLSIPLKSLGLGVLSLAEY+DLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPILKDPPNGERGDGDAAMQ Sbjct: 1 MEDPAAQQRALAEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGSVDDSVEF-VLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPVLEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSERPKLELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGFEPLTGGRPARRELPLECIEALLRLLSIPLKSLGLGVLSLAEYIDLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPILKDPPNGERGDGDAAMQ 485
BLAST of mRNA_Ecto-sp13_S_contig1023.255.1 vs. uniprot
Match: A0A7S2XXV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXV8_9STRA) HSP 1 Score: 474 bits (1219), Expect = 6.660e-161 Identity = 260/484 (53.72%), Postives = 333/484 (68.80%), Query Frame = 1 Query: 19 QQRALAEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGD------GGSVDDSVEFFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSERLKLELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGFEPLTGGRPARRDLPLECIEALLRLLSIPLKSLGLGVLSLAEYVDLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPILKDPPN-GERGDGDA 1449 Q R + E ++V + AF MKRA D D + A +HA ML+EL+T+ L+P NYYELY+KV DELR+LED+F RQ R PM LYEQ Q C VLPRLYLL TVG CYI S+EAPA+ +L DLLEMTKGVQHPM GLFLR+Y +H TRDKLPD GS Y G V D+ EF VL+NF EAN+LWVR+ Q G SKD+KRRERER+ LR+LVGTNLVRLSQLEG+D Y ILP ILEQV GC+D++AQ+YLMDC+IQVFPDEFHL +L FLD + +LKEKV VR +LESLMER+ N+ E P+ P + + L VT L++ R ++ +SE IL+Q AL FA + +P RL+ ++ CI C ++ G + L E +A++RLLSIPL SL L VL L +Y DLL+++PWE +KQ++++LLRSVLS L + V++L +I P+LKD + G GD +A Sbjct: 12 QPRFMQEATRKVKERAFYMKRAMDTDDLQGALSHASEMLRELRTSLLTPSNYYELYIKVSDELRYLEDYFEGLRRQGR-PMERLYEQVQGCGNVLPRLYLLITVGGCYIKSKEAPAKTVLADLLEMTKGVQHPMWGLFLRHYLAHQTRDKLPDVGSEYADPEDPACGGSGVADAYEF-VLQNFQEANRLWVRLQHQ-GASKDRKRRERERQALRILVGTNLVRLSQLEGIDQDTYAQVILPRILEQVSGCRDSLAQTYLMDCIIQVFPDEFHLTTLRPFLDTLTQLKEKVNVRTILESLMERLINFAENSPEDKPPGTEVYELFVVSVTSLLTNRPQMTMSEKILLQAALCDFAVKWHPDRLDLVDQCISTCASSLAEGG-----------QALDAEAQDAMVRLLSIPLSSLALKVLDLTQYADLLNYIPWEPRKQIAVDLLRSVLSSGVPLRTPEEVEKLFVLIVPLLKDEKSSGAAGDSEA 481
BLAST of mRNA_Ecto-sp13_S_contig1023.255.1 vs. uniprot
Match: W7TDU3_9STRA (Vacuolar protein sorting-associated protein 35 n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDU3_9STRA) HSP 1 Score: 479 bits (1234), Expect = 9.720e-158 Identity = 252/479 (52.61%), Postives = 339/479 (70.77%), Query Frame = 1 Query: 19 QQRALAEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGD-GGSVDDSVEFFVLENFVEANKLWVRMHGQ--KGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSERLKLELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGF---EPLTGGRPARRDLPLECIEALLRLLSIPLKSLGLGVLSLAEYVDLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPILKDPPNGERG 1437 Q + L E ++V ++AF MK A D D K THA +ML+EL+T L+P++YYELYMKVLDELR++ED+FT +Q + P+V LYE+ Q+C VLPRLYLL TV YI S EAPARDILKDL+EM+KGVQHPMRGLFLRNY S V+RDKLPD G+PYEG+ GGSV D+ EF +L+NF EAN+LW RM Q +KDKKRRE+ER++LR+LVGTNLVRLSQL+GV+ A YK ILP +LEQVV CKDT+AQSYLM+C++QVF DEFH+A+L+ FL +LKEKV VR +LE +M+R+ + E +P A+P + F + N CV++L+ ER + E++ +Q +LL +A +PG LEY+N +G C A+ + E P L E +E + RLL++PL L L VL L + LL FLPW S++QV + LL++V + + LSDL+ V++LL M+ P++K+ P+ G Sbjct: 7 QTKFLEEAMRKVKEQAFYMKHAMDNEDLKGTLTHASDMLRELRTGLLTPKSYYELYMKVLDELRYVEDYFTGLQKQGK-PVVELYEKVQSCGNVLPRLYLLITVAGVYIKSLEAPARDILKDLVEMSKGVQHPMRGLFLRNYLSQVSRDKLPDVGTPYEGEEGGSVQDAYEF-ILQNFSEANRLWCRMQQQPTNAHNKDKKRREKERQELRILVGTNLVRLSQLQGVEAATYKEHILPRLLEQVVQCKDTLAQSYLMECIVQVFGDEFHIATLDLFLAACTQLKEKVNVRAILEGVMDRLATFAEANPAAIPPHLRTFDMFNTCVSKLLEERPGYSVVEVLRLQASLLNYALHSFPGNLEYLNLALGNCATALADKRAAHQEQAVIVAPLPFALDSEGVEVVERLLTLPLACLALKVLELPHFASLLEFLPWASRRQVGVTLLQAVYNSRAKLSDLESVEKLLEMVVPVIKEEPSSVLG 483
BLAST of mRNA_Ecto-sp13_S_contig1023.255.1 vs. uniprot
Match: A0A835Z7F2_9STRA (Vacuolar protein sorting-associated protein 35 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F2_9STRA) HSP 1 Score: 469 bits (1208), Expect = 1.250e-151 Identity = 266/535 (49.72%), Postives = 337/535 (62.99%), Query Frame = 1 Query: 4 EDPAAQQRAL-AEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGS-----------------------------------------------------------VDDSVEFFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSERLKLELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGFEPLTGGRPARRDLPLE--CIEALLRLLSIPLKSLGLGVLSLAEYVDLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPILKDPP 1422 E AA+QRAL A+ KRV + A M+RA D D +A A ++++ELK L+P+ Y+ELY++V +LR+LE+FF N + PMV LYE QAC VLPRLYLL TVG+CYI S EAPA +L DLLEM KGVQ PMRGLFLR Y S VT+DKLPD G+PYEG+GGS V D +EF VLENF E+N+LWVRMH Q KDK+RRERER+DLR+LVGTNL RLS+LEGVD YKT +LP +L+QVV C+DTIAQSYLMDC++Q FPDEFH+ +L FL+ + +LKEKVRVR +LESLM+R+ Y E ALP D F LNDCV RL+ ER ++L+EI+L+Q +LL+FAS+CYP + Y++HC+GV +A+ R +D+ L ++AL RLL PL+SLG LSL + LL LPW + V+ LL SV++ LSD D VDRLLGM+AP+L DPP Sbjct: 14 EAEAARQRALLADCGKRVQEHAGYMRRAIDGGDVSAAVDRAADLVRELKVATLAPKTYFELYLQVAAQLRYLEEFFLVLNAKGT-PMVQLYEHVQACAQVLPRLYLLCTVGSCYIRSGEAPAHAVLSDLLEMAKGVQQPMRGLFLRFYLSQVTKDKLPDTGTPYEGEGGSASATAAPAQLTARASCASVRSAATVELEQFKGAPANRVNAQLIARPARIRLRNGLSARSVSDCLEF-VLENFAESNRLWVRMHAQ-AAVKDKRRRERERRDLRVLVGTNLERLSELEGVDAEMYKTAVLPRVLDQVVTCRDTIAQSYLMDCIVQGFPDEFHIHALPVFLESLLKLKEKVRVRLILESLMQRLSKYAETDGSALPGDASTFTQLNDCVARLIQERPSMDLAEIVLLQGSLLEFASRCYPSTIAYVDHCLGVAAQAVAVR-----------TQDVQLSDAAVDALQRLLLAPLRSLGTQALSLERFAPLLGLLPWAGRAVVARALLTSVVALSEPLSDPDTVDRLLGMMAPLLVDPP 534
BLAST of mRNA_Ecto-sp13_S_contig1023.255.1 vs. uniprot
Match: A0A7S3H9X6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9X6_9STRA) HSP 1 Score: 456 bits (1172), Expect = 1.560e-150 Identity = 245/490 (50.00%), Postives = 330/490 (67.35%), Query Frame = 1 Query: 19 QQRALAEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGSVDDSVEFFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHP--DALPKDVDAFRLLNDCVTRLVSERLKLELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGF------EPLTGGRPARRDLPLECIEALLRLLSIPLKSLGLGVLSLAEYVDLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPILKDPPNGERGDGDAAMQVV 1464 Q R L + K V ++AF MKRA D K A HA ML+EL+T L+P+NYYELYM++LDELR LE++ +S R R MV +YEQ Q CT V+PRLYLL VG YI S+EAPA+DILKDL+E+ KGVQHPMRGLFLRNY + V++ KLPD GSPYEG GGS+ D+ F +L+NF+E N+LWVR+ G +KDKK+RE+ER DLR+LVGTNLVRLSQLEG+D + YK+++LP ILE+V+ CKDTIAQSYLMDC+IQVFPD+FHL +LE L V LKEKV VR +LE+LM+R+ + + A+ ++++F+L NDC+T L+ +R + L+E + +Q L FA +C+P R++Y+ HC+ G + F E GR IEALL S PL +L L VL + YV L+ +LPW + K+V+ LL SV++ S LS++ V++L I P+L+D D + + V Sbjct: 9 QSRFLEDALKEVQKQAFYMKRAMDGDSLKLALDHATEMLRELRTNLLTPKNYYELYMRILDELRELEEYLSSLQRSGRS-MVEIYEQVQCCTNVVPRLYLLCCVGGVYITSKEAPAKDILKDLIEVIKGVQHPMRGLFLRNYLTLVSKGKLPDVGSPYEGVGGSIQDAYSF-LLQNFIETNRLWVRLQTA-GVNKDKKKREKERMDLRILVGTNLVRLSQLEGLDVSDYKSNVLPKILEEVLSCKDTIAQSYLMDCIIQVFPDDFHLNTLELLLQTVSSLKEKVNVRAILEALMDRLAAHAANNAATGAVGAEINSFKLFNDCITTLIEDRASMSLTETLRLQTVLTNFALKCHPSRIDYVAHCLSTSGILIEKTDFVATSAAESQLEGRSTNETTTQ--IEALL---SAPLSTLALRVLEIPSYVKLMSYLPWGNWKEVASTLLNSVINSHSPLSEVVQVEQLFKTITPLLRDRDANAAAADDVSRETV 490
BLAST of mRNA_Ecto-sp13_S_contig1023.255.1 vs. uniprot
Match: A0A8J2SYB7_9STRA (Vacuolar protein sorting-associated protein 35 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYB7_9STRA) HSP 1 Score: 409 bits (1050), Expect = 2.440e-131 Identity = 225/465 (48.39%), Postives = 307/465 (66.02%), Query Frame = 1 Query: 19 QQRALAEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGSVDDSVEFFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSERLK-LELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGFEPLTGGRPARRDLPLECIEALLRLLSIPLKSLGLGVLSLAEYVDLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPIL 1410 Q R LAE ++RV ++ F K+A A D A H+ +ML+EL+T+ L+PRNYYELYMKV DELRHL+ FF P +YE+AQAC VLPRLYLL T GA Y+ + +APARDIL DL+EM KGVQHPMRGLFLR+Y + +D LPD GS +EGDGG V +V+F +L NF E N+LWVRM Q GP+ KKRRE ERK L++LVGTNLVRLSQLEGVD ++Y +D+LPP+LEQVV C+D IAQ YL+DC+I VFPDEFHLA+L++FL +L++KV VR +LE++M R+ N + + AF + C +RLV E+ + L+++++I ++ ALL+FA +CYPG LEY+ C+ A+++ + G D +E LL +S +L +L+L + L LP E +K V+ LR VL + AL + V +L ++ P+L Sbjct: 15 QPRYLAEASRRVQEQGFYAKKACGARDLPGALRHSSDMLRELRTSLLTPRNYYELYMKVCDELRHLDQFFQQLVADGT-PAADIYERAQACGDVLPRLYLLITAGAVYVKTMQAPARDILHDLVEMAKGVQHPMRGLFLRHYLAQACKDALPDTGSKFEGDGGDVSHAVDF-ILRNFGETNRLWVRMQNQ-GPASQKKRREEERKQLKILVGTNLVRLSQLEGVDESRYASDVLPPLLEQVVNCRDAIAQPYLLDCIINVFPDEFHLATLDSFLTCCTQLRDKVCVRSILEAMMRRLANGARQEDSEVLGPPGAFDAFDACASRLVEEKKEALKVADLIQLRAALLEFAVECYPGELEYVQRCLAQTSAAIMN----DVVG------DDAMELETLLLAPVSSQQMTLA-SLLTLDDIAPLTRRLPIEQRKNVARRCLRRVLDGDDALDSPEAVVKLCAILEPLL 465
BLAST of mRNA_Ecto-sp13_S_contig1023.255.1 vs. uniprot
Match: A0A7S3Z9X4_9EUKA (Vacuolar protein sorting-associated protein 35 n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z9X4_9EUKA) HSP 1 Score: 392 bits (1008), Expect = 3.570e-125 Identity = 206/462 (44.59%), Postives = 294/462 (63.64%), Query Frame = 1 Query: 82 ATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGSVDDSVEFFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSERLKLELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGFEPLTGGRPARRDLPLECIEALLRLLSIPLKSLGLGVLSLAEYVDLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPILKDPPNGERGDGDAAMQVVY 1467 A D + + A A +L EL+T+ LSP+NYY+LYM D LR LE + T ++ + R +V LYE Q ++PRLYLL TVG+ YI S++AP +DIL DL+E+ +GVQHPMRGLFLRNY S VTRDKLPDAGS YEGDGG V D++EF VL+NF E NKLWVRM Q G +D +RE+ER++L+ LVGT LVRLS++EGVD Y +LP +LE V CKD IAQ YLM+C+IQVFPDE+HL +LEAFL + LK KV V ++ S+M R+ + +P+ +P DVD F L + ++ + K+ L I+ +Q ALL F+S+CYP +LEY +H +G + G L +C + + LL+ PL+++ L VLSL Y L+ F+ ++ ++ +++ + +V++ L ++ V + I P LKD + + DG A ++ + Sbjct: 30 ALDNGNIRDALHKAMELLTELRTSLLSPQNYYDLYMHATDVLRRLEAYVTDEDERGRISVVDLYESVQHAGTIVPRLYLLATVGSAYIKSKKAPTKDILFDLVELCRGVQHPMRGLFLRNYLSQVTRDKLPDAGSQYEGDGGDVKDAIEF-VLQNFGEMNKLWVRMQHQ-GALRDLGKREQERRNLKQLVGTALVRLSEMEGVDMKMYSEVVLPKLLEVTVNCKDVIAQEYLMECIIQVFPDEYHLETLEAFLRSIAHLKSKVNVNNIVVSMMNRLSAFARSNPEKIPSDVDIFALFHRHCAAIIKAKSKMSLESILELQAALLNFSSKCYPEKLEYADHVLGFTADVLAKAGT-----------TLDAKCTKIVKSLLTAPLETMQLAVLSLKNYHPLMEFMGFDDRRDLAIRMCGAVVNSGELLDTVEKVVTMFKFIGPTLKDQKDKKAEDGTKASEIKF 478
BLAST of mRNA_Ecto-sp13_S_contig1023.255.1 vs. uniprot
Match: L8H265_ACACA (Vacuolar protein sorting-associated protein 35 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H265_ACACA) HSP 1 Score: 391 bits (1004), Expect = 3.160e-124 Identity = 208/469 (44.35%), Postives = 307/469 (65.46%), Query Frame = 1 Query: 19 QQRALAEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGSVDDSVEFFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSERLKLELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGFEPLT-GGRPARRDLPLECIEALLRLLSIPLKSLG--LGVLSLAEYVDLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPILKD 1416 Q++ L E + +EAF MKR D A HA M+ EL+T+ LSP+NYYELYM+ D+LRHLE F S+ RQ+ + + LYE Q +LPRLYLL TVG+ YI ++EAPA+D+L+DL+EM +GVQHP RGLFLR Y S +T+DKLPD GS YEG GG V+DS+ F +L+NF E NKLWVRM Q GP +DK RRE+ER++LRLLVG NL RLSQL+GVD A YK +LP I EQVV C+D IAQ YLM+ LIQ+FPD FHL +LE FLD +L+ V V+ ++ S+++R+ N+ + P P+++D F++ + +T ++ +R K+ +++ + V+LL + + YP +LEY++ + + + G+ EC++ + LL+IPL L +L L Y ++ L + ++++++LE+L +V++ E+ + + + V +L I P+LKD Sbjct: 40 QKKVLEEAKATLNREAFFMKRCLDNKKLMEALKHASTMICELRTSLLSPKNYYELYMQAFDQLRHLEAFL-SEERQSGKKLSELYEIVQYAGNILPRLYLLVTVGSIYIRTKEAPAKDVLRDLVEMCRGVQHPTRGLFLRTYLSEMTKDKLPDVGSDYEGAGGDVNDSISF-ILQNFTEMNKLWVRMQHQ-GPVRDKARREQERRELRLLVGKNLARLSQLDGVDVAIYKEAVLPRITEQVVNCRDQIAQQYLMEILIQIFPDHFHLQTLEPFLDTCAKLQPTVDVKSIVVSMLDRLANFAAQEPTNFPREIDVFKIFSSAITNIIEQRPKMTAEDMLALYVSLLNLSLKVYPDKLEYVDQVFNNTTTLLAKLKEDGVDYSGK--------ECVKHIQSLLNIPLSIYNNVLVLLKLDNYTTIIPHLGYANRRKIALEILNNVIANETRIPEAEDVAKLFLAIQPLLKD 497
BLAST of mRNA_Ecto-sp13_S_contig1023.255.1 vs. uniprot
Match: L1IRF8_GUITC (Vacuolar protein sorting-associated protein 35 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IRF8_GUITC) HSP 1 Score: 386 bits (992), Expect = 1.690e-123 Identity = 225/469 (47.97%), Postives = 303/469 (64.61%), Query Frame = 1 Query: 16 AQQRALAEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGSVDDSVEFFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSERLKLELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGFEPLTGGRPARRDLPLECIEALLRLLSIPLKSLG--LGVLSLAEYVDLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPILKD 1416 A R L EG V Q+AFLMKRA D ++ + + NML EL+T LSP+N+YELY+ V DE+RHLE +F + ++ R+ MV LYE Q ++PRL+LL TVG+ YI S+EAPARDILKDL+EM +GVQHPMRGLFLRNY RDKLPD GS Y G V D ++F ++ NF E NKLWVRM Q GP +D++RRERER DLR+LVGTNLVRLS LEG+D YKT +LP ILEQV+ CKD IAQ YLM+ +IQVFPDEFHL +LE FL +L+ V V+ +L +LM R+ + + P +P DVD + + V+++ LEL+ + +QVAL+ FA P RL++++ + VC + + S G L+G PA+ ++LL PL S G L +L+L Y L+ +LP ES+ +V+ +R +LS ++ VD LL I P++KD Sbjct: 4 AMARWLEEGKAVVKQQAFLMKRALDNTNLRDGLKYGSNMLCELRTGLLSPKNFYELYIMVADEMRHLEQYFLEEWKRGRR-MVELYELVQHAGNIVPRLFLLITVGSVYIRSKEAPARDILKDLVEMCRGVQHPMRGLFLRNYLLQCARDKLPDIGSEY---GSDVADGIDF-LMHNFAEMNKLWVRMQHQ-GPVRDRERRERERLDLRILVGTNLVRLSNLEGIDADMYKTQVLPRILEQVISCKDQIAQQYLMEVIIQVFPDEFHLRTLEEFLATCPQLQSGVDVKAILVALMNRLAAFAKAEPAQIPSDVDMLAIFHSHVSKMTGSN-TLELAASLDLQVALVNFALGFAPDRLDFVDQTLAVCAQLLQSNGETRLSG--PAKHST--------VQLLKTPLISNGQPLTILALPHYAGLMIYLPLESRSEVATLAVRMLLSSKTP------VDSLLNFIQPLVKD 449
BLAST of mRNA_Ecto-sp13_S_contig1023.255.1 vs. uniprot
Match: A0A6U2DVH1_HEMAN (Vacuolar protein sorting-associated protein 35 n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2DVH1_HEMAN) HSP 1 Score: 387 bits (995), Expect = 2.630e-123 Identity = 224/480 (46.67%), Postives = 312/480 (65.00%), Query Frame = 1 Query: 19 QQRALAEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTTQLSPRNYYELYMKVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGSVDDSVEFFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSERLKLELSEIILMQVALLQFASQCYPGRLEYINHCIGVCGRAMVSRGFEPLTGGRPARRDLPLECIEALLRLLSIPLKSLG--LGVLSLAEYVDLLHFLPWESQKQVSLELLRSVLSKESALSDLDCVDRLLGMIAPILKD--PPNGERGDGD 1446 Q++ L EG Q+AFLMKRA D + + +A NML EL+T LSP+N+YELY+ + DE+RHLE +F + ++ R+ MV LYE Q ++PRL+LL +VG+ Y+ S+E ARDILKDL+EM +GVQHPMRGLFLRNY H RDKLPD GS + G +V DSV+F +L NF E NKLWVRM Q GP +D++RRE+ER DLR+LVGTNLVRLS LEGVD YK +LP ILEQV+ CKD IAQ YLM+C+IQVFPDE+HL +L+ LDG +L+ V V+ VL +LM R+ + + P ++P DV+ + + VTR+ + ++L+ I+ +QVALL FA P +L+Y++ + VCG + + G P G R A++ LL PL S G L ++ L Y L+++LP+ S+K+V+L R + + ++ + VD LL + P++KD GER + D Sbjct: 14 QEKWLEEGKAVTKQQAFLMKRALDNGNLRDGLKYASNMLCELRTGLLSPKNFYELYIMIADEMRHLEQYFYEEWKRGRR-MVELYELVQHAGNIVPRLFLLISVGSVYVRSKEVSARDILKDLVEMCRGVQHPMRGLFLRNYLLHCARDKLPDVGSDF---GDNVADSVDFLML-NFSEMNKLWVRMQHQ-GPVRDRERREKERLDLRILVGTNLVRLSNLEGVDCDMYKAMVLPRILEQVINCKDQIAQQYLMECIIQVFPDEYHLRTLDEILDGCGQLQSGVDVKAVLIALMNRLALFAKNEPGSIPPDVNMLDIFHSHVTRMAAS---VDLAGILDLQVALLNFAMGFAPEKLDYVDQILQVCGEQLAASG-SPRVDGAAER---------AVVSLLKTPLISHGNALTIILLEHYAPLINYLPFSSRKEVALLAARMMSKGSAPMTTPEEVDALLSFVQPLVKDVAEDEGEREELD 474 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1023.255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1023.255.1 >prot_Ecto-sp13_S_contig1023.255.1 ID=prot_Ecto-sp13_S_contig1023.255.1|Name=mRNA_Ecto-sp13_S_contig1023.255.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=496bp MEDPAAQQRALAEGNKRVMQEAFLMKRATDASDTKSAFTHAGNMLKELKTback to top mRNA from alignment at Ecto-sp13_S_contig1023:67..6561- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1023.255.1 ID=mRNA_Ecto-sp13_S_contig1023.255.1|Name=mRNA_Ecto-sp13_S_contig1023.255.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6495bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1023:67..6561- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1023:67..6561- >mRNA_Ecto-sp13_S_contig1023.255.1 ID=mRNA_Ecto-sp13_S_contig1023.255.1|Name=mRNA_Ecto-sp13_S_contig1023.255.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1488bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1023:67..6561- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |