mRNA_Ecto-sp13_S_contig10229.254.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10229.254.1 vs. uniprot
Match: D7G2F8_ECTSI (DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F8_ECTSI) HSP 1 Score: 690 bits (1780), Expect = 2.040e-249 Identity = 340/351 (96.87%), Postives = 343/351 (97.72%), Query Frame = 1 Query: 1 MAVKGGFGARNPDVGKKRHTFHCQSTTNSRDHAANSEAAEMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKIFQEVGWVGAVKAQQLYDKGMRSIEDLRTKGLHLLSEQAQICLNRHEDITQPMPRSEAAEIEAVVTRVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSYRC 1053 MAVKGGFGARNPDVGKKRHTFHCQSTT SR HAANSEAA MLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKI QEVGWVGAVKAQQLYDKG+RSIEDLRTKGLHLLSEQAQICL+RHEDI Q MPRSEAAEIEAVVT+VAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPG GRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSY C Sbjct: 1 MAVKGGFGARNPDVGKKRHTFHCQSTTTSRGHAANSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKILQEVGWVGAVKAQQLYDKGVRSIEDLRTKGLHLLSEQAQICLSRHEDIMQRMPRSEAAEIEAVVTKVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGTGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSYSC 351
BLAST of mRNA_Ecto-sp13_S_contig10229.254.1 vs. uniprot
Match: A0A6H5JHQ3_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ3_9PHAE) HSP 1 Score: 673 bits (1737), Expect = 8.560e-236 Identity = 333/351 (94.87%), Postives = 341/351 (97.15%), Query Frame = 1 Query: 1 MAVKGGFGARNPDVGKKRHTFHCQSTTNSRDHAANSEAAEMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKIFQEVGWVGAVKAQQLYDKGMRSIEDLRTKGLHLLSEQAQICLNRHEDITQPMPRSEAAEIEAVVTRVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSYRC 1053 MAVKGGFGARNPDVGKKRHTFHCQSTTNSR HA NSEAA+MLEDLAKLCAVRGGDGSVFKERGFKNAAGVL+RLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKEL+TFYEEGRM+RLD LEADPKLKCLKIFQEVGWVGAVKAQQLYD+G+RSIEDLRTKGLHLLSEQAQICLNRHEDITQ MPRSEAAEIEAVVTRVAQSICPG ACGSYRRGKSHCGDVDVLIRPPEGQEDSP+FDDLIKRLVETGFITDKLTLAG PH+PGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSY C Sbjct: 477 MAVKGGFGARNPDVGKKRHTFHCQSTTNSRGHAVNSEAADMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLKRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELATFYEEGRMYRLDELEADPKLKCLKIFQEVGWVGAVKAQQLYDQGIRSIEDLRTKGLHLLSEQAQICLNRHEDITQRMPRSEAAEIEAVVTRVAQSICPG----ACGSYRRGKSHCGDVDVLIRPPEGQEDSPVFDDLIKRLVETGFITDKLTLAGSPHKPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSYSC 823
BLAST of mRNA_Ecto-sp13_S_contig10229.254.1 vs. uniprot
Match: D7G2F7_ECTSI (DNA polymerase lambda n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F7_ECTSI) HSP 1 Score: 464 bits (1193), Expect = 3.040e-155 Identity = 235/346 (67.92%), Postives = 278/346 (80.35%), Query Frame = 1 Query: 1 MAVKGGFGARNPDVGKKRHTFHCQSTTNSRDHAANSEAAEMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGR-MHRLDGLEADPKLK--CLKIFQEVGWVGAVKAQQLYDKGMRSIEDLRTKGLHLLSEQAQICLNRHEDITQPMPRSEAAEIEAVVTRVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEV 1029 M ++G GAR P+V +R Q ++ + N EAA+ML+ LA+LCA RGGDGSVF ERGFK+AA LR LG QIT+I+QLKDLRK++P+RVRG+GD MKEL+ F EG+ R ADP CLK+FQEVGWVGAVKA+QLYDKGMRSIEDLRT G LL+EQ ++CLNRHEDI Q MPRSEAAEIEA VT+VAQSICPGVICQACGSYRRGKS+CGDVDVLIRPPEGQEDSPMF +LIK L ETGFITD+L + GP+ PGK Q+FMG+CKLPG+G++HRR+D+K YPTS+FAFAVLYFTGS FN +MR FAK KGLKL+DKGL +V+ +GEEV Sbjct: 258 MNLEGEVGARKPNVDMRR-VSQGQPSSFWGPQSPNKEAADMLDGLAELCATRGGDGSVFNERGFKSAAAALRMLGTQITDIEQLKDLRKNDPERVRGVGDGAMKELTAFLAEGKGKSRAPVSGADPPAPEACLKLFQEVGWVGAVKARQLYDKGMRSIEDLRTSGRDLLTEQMRVCLNRHEDIKQRMPRSEAAEIEAAVTKVAQSICPGVICQACGSYRRGKSNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGEGQIHRRLDVKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKSKGLKLNDKGLFKVDPFSGEEV 602
BLAST of mRNA_Ecto-sp13_S_contig10229.254.1 vs. uniprot
Match: A0A6H5JQ91_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ91_9PHAE) HSP 1 Score: 362 bits (930), Expect = 3.370e-116 Identity = 190/304 (62.50%), Postives = 218/304 (71.71%), Query Frame = 1 Query: 160 GDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKL--KCLKIFQEVGWVGAVKAQQLYDKGMRSIEDLRTKGLHLLSEQAQICLNRHEDITQPMPRSEAAEIEAVVTRVAQSICPGVICQA------------CGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEV 1029 GDGSVF ERGFK+AA LR LG QIT+I+QLK+ + + F R R E DP CLK+FQEVGWVGAVK QQLYDKGMRSIE+LRT+G HLL+EQ + CLNRHEDI MPRSEAAEIEA VT+VAQSICPGVICQA CGSYRR K +CGDVDVLIRPPEGQEDS MF +L+K L ET ITD+L + GP+ PGK Q+FMG+CKLPG+GRLHRR+DIK YP S+FAFAVLYF GS FN +MR F K KGLKL+DKGL +V+ +GEEV Sbjct: 285 GDGSVFNERGFKSAAATLRMLGTQITDIEQLKETSERGSR--------------PFLPRARARRSPVSEVDPPTVEACLKLFQEVGWVGAVKTQQLYDKGMRSIENLRTRGRHLLTEQVRFCLNRHEDIKPRMPRSEAAEIEAAVTKVAQSICPGVICQASFLTSPRRRTEACGSYRRVKRNCGDVDVLIRPPEGQEDSSMFLELVKELTETRLITDRLAVPEGPYTPGKPQTFMGVCKLPGEGRLHRRLDIKLYPASMFAFAVLYFAGSGDFNMNMRCFGKSKGLKLNDKGLFKVDPFSGEEV 574
BLAST of mRNA_Ecto-sp13_S_contig10229.254.1 vs. uniprot
Match: F7B5D1_CHICK (DNA polymerase lambda n=17 Tax=Galliformes TaxID=8976 RepID=F7B5D1_CHICK) HSP 1 Score: 216 bits (549), Expect = 2.610e-61 Identity = 122/310 (39.35%), Postives = 179/310 (57.74%), Query Frame = 1 Query: 67 CQSTTNSRDHAANSEAAEMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKIFQEVGWVGAVKAQQLYDKGMRSIEDLRTKGLHLLSEQAQICLNRHEDITQPMPRSEAAEIEAVVTRVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGL 996 C ++NS+ N E LE LAK +V+G ++ G+ A L+ +T+ Q E ++ G+G + +++ E G + +LD + + L++F + G AQ Y +G R+++D+RTK L S+QA + L +ED + MPR EAAEIE V + A ++ PG++C ACGSYRRGK+ CGDVDVL+ P+GQ +F L+ L E+GF+TD L G + ++G+C+LPG R HRR+DI P S FA A+LYFTGS+HFNRSMR+ AK KG+ LS+ L Sbjct: 272 CAQSSNSKKENHNQCITEKLEVLAKAYSVQG---DKWRALGYAKAINALKSYHKPVTSYQ--------EACKIPGIGKRMAEKILEILESGHLRKLDHISES--VPVLELFSNIWGAGVKTAQMWYQQGFRTLDDIRTKA-SLTSQQA-VGLKHYEDFLERMPREEAAEIEQTVRQAALALKPGLVCVACGSYRRGKATCGDVDVLVTHPDGQSHRGLFSKLLDSLHESGFLTDDLV---SQEDNGDQKKYLGVCRLPGPARRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHAL 563
BLAST of mRNA_Ecto-sp13_S_contig10229.254.1 vs. uniprot
Match: G1NCL9_MELGA (DNA polymerase lambda n=10 Tax=Galliformes TaxID=8976 RepID=G1NCL9_MELGA) HSP 1 Score: 215 bits (547), Expect = 2.860e-61 Identity = 121/310 (39.03%), Postives = 180/310 (58.06%), Query Frame = 1 Query: 67 CQSTTNSRDHAANSEAAEMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKIFQEVGWVGAVKAQQLYDKGMRSIEDLRTKGLHLLSEQAQICLNRHEDITQPMPRSEAAEIEAVVTRVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGL 996 C +++S+ N E LE LAK +V+G ++ G+ A L+ +T+ Q E ++ G+G + +++ E G + +LD + + L++F + G AQ Y +G R+++D+RTK L S+QA + L +ED + MPR EAAEIE V + A ++ PG++C ACGSYRRGK+ CGDVDVL+ P+GQ +F L+ L E+GF+TD L G+ + ++G+C+LPG R HRR+DI P S FA A+LYFTGS+HFNRSMR+ AK KG+ LS+ L Sbjct: 242 CAQSSHSKKENHNQCITEKLEVLAKAYSVQG---DKWRALGYAKAINALKSYHKPVTSYQ--------EACKIPGIGKRMAEKILEILESGHLRKLDHISES--VPVLELFSNIWGAGVKTAQMWYQQGFRTLDDIRTKA-SLTSQQA-VGLKHYEDFLERMPREEAAEIEQTVRQAALALKPGLVCVACGSYRRGKATCGDVDVLVTHPDGQSHRGLFSKLLDNLHESGFLTDDLV---SQEDNGEQKKYLGVCRLPGPARRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHAL 533
BLAST of mRNA_Ecto-sp13_S_contig10229.254.1 vs. uniprot
Match: UPI001CA968BB (DNA polymerase lambda isoform X2 n=2 Tax=Chelonioidea TaxID=27791 RepID=UPI001CA968BB) HSP 1 Score: 210 bits (535), Expect = 2.980e-61 Identity = 119/310 (38.39%), Postives = 174/310 (56.13%), Query Frame = 1 Query: 67 CQSTTNSRDHAANSEAAEMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKIFQEVGWVGAVKAQQLYDKGMRSIEDLRTKGLHLLSEQAQICLNRHEDITQPMPRSEAAEIEAVVTRVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGL 996 C +++S+ N E LE L K V+G ++ G+ A L+ +T+ Q E ++ G+G + +++ E G + +LD + + L++F + G AQ Y +G R+++D+ TK L S+QA I L +ED + MPR EA EIE V A+S+ PG++C ACGSYRRGK+ CGDVDVL+ P+GQ +F L+ L +GF+TD L G + ++G+C+LPG GR HRR+DI P FA A+LYFTGS+HFNRSMR+ AK KG+ LS+ L Sbjct: 66 CAQSSDSKKENHNRHITEKLEVLGKAYTVQG---DKWRALGYSKAINALKSYHKPVTSYQ--------EAFKIPGIGKRMAEKILEILESGHLRKLDHISES--VAVLEVFSNIWGAGVKTAQMWYQQGFRTLDDIHTKA-PLTSQQA-IGLKHYEDFLERMPREEAKEIEQTVREAARSLNPGLVCMACGSYRRGKATCGDVDVLVTHPDGQSHRGIFGKLLDSLRRSGFLTDDLVRQ---EDSGNQKKYLGVCRLPGPGRRHRRLDIIVVPHCEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHAL 357
BLAST of mRNA_Ecto-sp13_S_contig10229.254.1 vs. uniprot
Match: A0A091IEX6_CALAN (DNA polymerase n=7 Tax=Neognathae TaxID=8825 RepID=A0A091IEX6_CALAN) HSP 1 Score: 212 bits (539), Expect = 7.020e-61 Identity = 121/319 (37.93%), Postives = 180/319 (56.43%), Query Frame = 1 Query: 40 VGKKRHTFHCQSTTNSRDHAANSEAAEMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKIFQEVGWVGAVKAQQLYDKGMRSIEDLRTKGLHLLSEQAQICLNRHEDITQPMPRSEAAEIEAVVTRVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGL 996 V + + C ++NS+ N E LE LAK +V+G ++ G+ A L+ +T+ Q E ++ G+G + +++ E G + +LD + + L++F + G AQ Y +G R+++D+RTK L S+QA + L + D + MPR EAAEIE V + A ++ PG++C ACGSYRRGKS CGDVDVL+ P+GQ +F L+ L +GF+TD L G + ++G+C+LPG + HRR+DI P S FA A+LYFTGS+HFNRSMR+ AK KG+ LS+ L Sbjct: 148 VAQSTSKWVCAHSSNSKKENHNQGITEKLEVLAKAYSVQG---DKWRALGYSKAINALKSYHKPVTSYQ--------EACKIPGIGKRMAEKILEILESGHLRKLDHISES--VPVLELFSNIWGAGVKTAQMWYSQGFRTLDDIRTKAA-LTSQQA-VGLKHYTDFLERMPREEAAEIEQTVRQAALALKPGLLCVACGSYRRGKSSCGDVDVLVTHPDGQSHRGVFSKLLDSLHRSGFLTDDLV---NQEDNGDQKKYLGVCRLPGPAQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHAL 448
BLAST of mRNA_Ecto-sp13_S_contig10229.254.1 vs. uniprot
Match: A0A8C8R967_9SAUR (DNA polymerase lambda n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8R967_9SAUR) HSP 1 Score: 214 bits (544), Expect = 8.010e-61 Identity = 124/322 (38.51%), Postives = 181/322 (56.21%), Query Frame = 1 Query: 34 PDVGKKRHTFHCQSTTNSRDHAANSEAAEMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKIFQEVGWVGAVKAQQLYDKGMRSIEDLRTKGLHLLSEQAQICLNRHEDITQPMPRSEAAEIEAVVTRVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLC 999 P GK + C ++ S+ N E LE L K AV +G ++ G+ A L+ +T+ Q E + G+G + +++ E G + +LD + ++ LK F + VG A+ Y +G R++ D+RTK L S+QA + + +ED MPR EAAEIE V A+S+ PG++C ACGSYRRGK+ CGDVDVL+ P+G+ +F L+ L +GF+TD L GG G + ++G+C+LPG G+ HRR+DI P S FA A+LYFTGS+HFNRSMR+ A+ K + LS+ LC Sbjct: 236 PPAGK----WVCAQSSESKKENHNQHITEKLEVLGKAYAV---EGDRWRVLGYSKAINALKSFHKPVTSYQ--------EACEIPGIGKRMAEKIMEILETGHLRKLDHISE--RVAVLKAFFNIWGVGEKTAKMWYQQGFRTLNDIRTKA-SLTSQQA-VGVKHYEDFLMRMPREEAAEIEQTVREAARSLNPGLVCVACGSYRRGKATCGDVDVLVTHPDGRSHRGVFGKLLASLRRSGFLTDDLVSQGGN---GDQKKYLGVCRLPGPGQRHRRLDIIVVPHSEFACALLYFTGSAHFNRSMRALARTKDMSLSEHALC 535
BLAST of mRNA_Ecto-sp13_S_contig10229.254.1 vs. uniprot
Match: A0A674GVT6_TAEGU (DNA polymerase n=2 Tax=Taeniopygia guttata TaxID=59729 RepID=A0A674GVT6_TAEGU) HSP 1 Score: 211 bits (537), Expect = 1.100e-60 Identity = 118/311 (37.94%), Postives = 177/311 (56.91%), Query Frame = 1 Query: 67 CQSTTNSRDHAANSEAAEMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKIFQEVGWVGAVKAQQLYDKGMRSIEDLRTKGLHLLSEQAQICLNRHEDITQPMPRSEAAEIEAVVTRVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLC 999 C ++N++ N E LE LAK +V+G ++ G+ A L+ +T+ Q E ++ G+G + +++ E G + +LD + + L++F + G AQ Y +G R+++D+RTK L S+QA + L + D + MPR EAAEIE V + A ++ PG++C ACGSYRRGK+ CGDVDVL+ P+GQ +F L+ L +GF+TD L G Q ++G+C+LPG + HRR+DI P FA A+LYFTGS+HFNRSMR+ A+ KG+ LS+ LC Sbjct: 147 CAQSSNTKKENYNQCITEKLEVLAKAYSVQG---DKWRALGYSKAINALKSYHKPVTSYQ--------EACKIPGIGKRMAEKILEILESGHLRKLDHISES--VPVLELFSNIWGAGVKTAQMWYQQGFRTLDDIRTKAT-LTSQQA-VGLKHYTDFLERMPREEAAEIEQTVRQAALALKPGLVCVACGSYRRGKATCGDVDVLVTHPDGQSHRGVFSKLLNSLRRSGFLTDDLV---SQEDNGDQQKYLGVCRLPGPAQRHRRLDIIVVPYREFACALLYFTGSAHFNRSMRALARTKGMSLSEHALC 439 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10229.254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10229.254.1 >prot_Ecto-sp13_S_contig10229.254.1 ID=prot_Ecto-sp13_S_contig10229.254.1|Name=mRNA_Ecto-sp13_S_contig10229.254.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=351bp MAVKGGFGARNPDVGKKRHTFHCQSTTNSRDHAANSEAAEMLEDLAKLCAback to top mRNA from alignment at Ecto-sp13_S_contig10229:1258..5804+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10229.254.1 ID=mRNA_Ecto-sp13_S_contig10229.254.1|Name=mRNA_Ecto-sp13_S_contig10229.254.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4547bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10229:1258..5804+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10229:1258..5804+ >mRNA_Ecto-sp13_S_contig10229.254.1 ID=mRNA_Ecto-sp13_S_contig10229.254.1|Name=mRNA_Ecto-sp13_S_contig10229.254.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1053bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10229:1258..5804+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |