mRNA_Ecto-sp13_S_contig10218.242.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10218.242.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE) HSP 1 Score: 976 bits (2524), Expect = 0.000e+0 Identity = 465/506 (91.90%), Postives = 474/506 (93.68%), Query Frame = 1 Query: 208 NAAMSPTAAPETXXXXXXXXXXGSPETGGSAETPTPAPSDGSSEYLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCQDPDVPDDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYNSWGYYSSCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGSSYYSCSSYSMDCQDPDANCTTPSPTPYCPWASDGYCDSYYNTEDCDWDGGDCCAYGCSSTTCLDPIYGCDSITTSYGDSDDSTSTFITYVTSSDDSGCFDGDWAVSDGKCDSGNNNAACGYDGGDCCECDCYDYGEVYECGVVGFYCLDQTSLCYGSTSGGNFDSDDFYGDDDYDDRGAFSFTPTPVVVTEELSLPTYSEMSVSKTELGGILALSFWGFCMLGCGAWAACGVFRKKVFGEXXXXXXXXXXXATLNRTSLNAHHQR 1725 NAA+SPTAAPETXXXXXX XXGSPET GSAETPTPAPSDGSSEYLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCG+DSDEELAHPCGQLGDGY+C DPDVPDDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCRDY+SWGY S+CGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGS YYSCSSYSMDCQDP+ANCTTPSPTPYCP+ASDGYCDSYYNTEDCDWDGGDCCAYGCSSTTCLDPIYGCDSITTSYGDSDDSTSTFITY TSSDDSGCFDG WAVSDGKCDSGNNNAAC YDGGDCCECDCYDYGE YECG G+YCLDQTS+CYGSTSGGNFDSDDFYG DRG SFTPTPVVVTEELSLPTYSEMSVS TELGGILALSFWGFCMLGCGAWAACGVFRKKVFGE ATLNRTSLNAH QR Sbjct: 20 NAALSPTAAPETXXXXXXDLXXGSPETEGSAETPTPAPSDGSSEYLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGADSDEELAHPCGQLGDGYNCLDPDVPDDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYSSWGY-STCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGSYYYSCSSYSMDCQDPNANCTTPSPTPYCPFASDGYCDSYYNTEDCDWDGGDCCAYGCSSTTCLDPIYGCDSITTSYGDSDDSTSTFITYTTSSDDSGCFDGVWAVSDGKCDSGNNNAACDYDGGDCCECDCYDYGEAYECGAFGYYCLDQTSICYGSTSGGNFDSDDFYGXXXXGDRGDLSFTPTPVVVTEELSLPTYSEMSVSTTELGGILALSFWGFCMLGCGAWAACGVFRKKVFGEEEEKGGGHPAAATLNRTSLNAHQQR 524
BLAST of mRNA_Ecto-sp13_S_contig10218.242.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI) HSP 1 Score: 972 bits (2513), Expect = 0.000e+0 Identity = 466/511 (91.19%), Postives = 478/511 (93.54%), Query Frame = 1 Query: 208 NAAMSPTAAPETXXXXXXXXXXGSPETGGSAETPTPAPSDGSSEYLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCQDPDVPDDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYNSWGYYSSCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGSSYYSCSSYSMDCQDPDANCTTPSPTPYCPWASDGYCDSYYNTEDCDWDGGDCCAYGCSSTTCLDPIYGCDSITTSYGDSDDSTSTFITYVTSSD----DSGCFDGDWAVSDGKCDSGNNNAACGYDGGDCCECDCYDYGEVYECGVVGFYCLDQTSLCYGSTSGGNFDSDDFYGDDDYDDRGAFSFTPTPVVVTEELSLPTYSEMSVSKTELGGILALSFWGFCMLGCGAWAACGVFRKKVFGEXXXXXXXXXXXA-TLNRTSLNAHHQR 1725 NAA+SPTAAP+T SPETG SAE PTPAPSDGS EYLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDC DPDVPDDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTA CGYDGGDCCRCTCRDYNSWGYY++CGYYGYDCMDPDAPS+CSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEEC WDGGDCCSCTCEGSSYYSCSSYSMDCQDP+ANCTTPSPTPYCPWASDGYCDSYYNTEDCDWDGGDCCAYGCSSTTCLDPIYGCDSITT YGD+D STSTF TY+TSSD SGCFDGDWAVSDGKCDSGNNNAAC YDGGDCCECDCYDYGEVYECGVVG+YCLDQTSLCYGSTSG + DSDD YGDDDYD+RGAFSFTPTPVVVTEELSLP+YSEMSVSKTELGGILALSFWGFCMLGCGAWA CGVFRKKVFGE XXXXXXXXXXA TLNRTSLNAH QR Sbjct: 20 NAALSPTAAPQTAAPATGDLATESPETGESAEIPTPAPSDGSPEYLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCLDPDVPDDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAECGYDGGDCCRCTCRDYNSWGYYTNCGYYGYDCMDPDAPSSCSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECDWDGGDCCSCTCEGSSYYSCSSYSMDCQDPNANCTTPSPTPYCPWASDGYCDSYYNTEDCDWDGGDCCAYGCSSTTCLDPIYGCDSITTYYGDNDVSTSTFSTYLTSSDADSVSSGCFDGDWAVSDGKCDSGNNNAACDYDGGDCCECDCYDYGEVYECGVVGYYCLDQTSLCYGSTSGESSDSDDSYGDDDYDERGAFSFTPTPVVVTEELSLPSYSEMSVSKTELGGILALSFWGFCMLGCGAWAVCGVFRKKVFGEEXXXXXXXXXXAATLNRTSLNAHQQR 530
BLAST of mRNA_Ecto-sp13_S_contig10218.242.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE) HSP 1 Score: 386 bits (992), Expect = 1.490e-124 Identity = 201/359 (55.99%), Postives = 228/359 (63.51%), Query Frame = 1 Query: 340 YLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCQDPDVPDDCGVTPSPAAAIGYPDCEEYL-YEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYNSWGYYSSCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGSSYYSCSSYSMDCQDPDAN--CTTPSPTPYCPWASDGYCDSYYNTEDCDWDGGDCC-----AYGCSSTTCLDPIYGCDSITTSYGDSDDSTSTFITYVTSSDDSGCFDGDWAVSDGKCDSGNNNAACGYDGGDCCECDCYDYGEVYECGVVGFYCLDQTSLC 1392 Y GC GY HI DGYCD D N A CG+DGGDCCACTCG D+ E+ H CG L DGYDC+DPDVP+DC + + CE Y+WQDG CDD+LNTA CGYDGGDCCRCTCRDY+SWGYYSSCGYYGYDC+DP+APS+CSTDSPTPSPAAGTDWPECEGY++ IGDG CDYYNNNEEC WDGGDCC+CTC S YY+C Y+ DC+DP + C+T S W GY YY T+D WD GD Y ST C+ G DG CDS N+A C +DGGDCCECDC D Y+CGVVG+ CLD TS C Sbjct: 159 YPGCGGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGMDA--EVDHECGLLNDGYDCRDPDVPEDCNLA-------NFAQCEGMNGYDWQDGYCDDDLNTAECGYDGGDCCRCTCRDYDSWGYYSSCGYYGYDCLDPEAPSSCSTDSPTPSPAAGTDWPECEGYLFEIGDGHCDYYNNNEECDWDGGDCCACTCV-SGYYTCGYYTFDCEDPSVSTDCSTTSTLDSDDWYG-GY--GYY-TDDI-WDSGDDFYGTYDVYNYGSTACISSYTG--------------------------------------DGWCDSFYNHADCEWDGGDCCECDCVD--ATYDCGVVGYDCLDPTSSC 462
BLAST of mRNA_Ecto-sp13_S_contig10218.242.1 vs. uniprot
Match: D7FX76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX76_ECTSI) HSP 1 Score: 280 bits (716), Expect = 9.790e-86 Identity = 126/172 (73.26%), Postives = 138/172 (80.23%), Query Frame = 1 Query: 340 YLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCQDPDVPDDCGVTPSPAAAIGYPDCEEYL-YEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYNSWGYYSSCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDG 852 Y GC GY HI DGYCD D N A CG+DGGDCCACTCG D+D E H CG LGDGYDC+DPDVPDDC + + CE+ Y+WQDG CDD+LNT CGYDGGDCCRCTCRDYNSWGYY+SCGYYGYDCMDP+APS+CSTDSPTPSPAAGTDWPECEGY+Y IGDG Sbjct: 157 YPGCGGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGVDADVE--HECGLLGDGYDCRDPDVPDDCNLA-------NFAQCEDMNGYDWQDGYCDDDLNTPECGYDGGDCCRCTCRDYNSWGYYNSCGYYGYDCMDPEAPSSCSTDSPTPSPAAGTDWPECEGYLYAIGDG 319
BLAST of mRNA_Ecto-sp13_S_contig10218.242.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 204 bits (519), Expect = 2.420e-54 Identity = 146/372 (39.25%), Postives = 174/372 (46.77%), Query Frame = 1 Query: 373 KDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCQDPDVP--DDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCR--DYNSWGYYSSCGYYG-YDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGSSYYSCSSYSMDCQDPDANCT-----TPSPTPYCPWAS--DGYCDSYYNTEDCDWDGGDCCAYGC--------------SSTT---CLDPIYGC---DSITTSYGDSDDSTSTFITYVTSSDDSGCFDGDWAVSDGKCDSGNNNAACGYDGGDCCECDCYDYGEVYECGVVGFYCLDQTSLC 1392 +DG CDT NNAEC +DGGDCC+CTC +D+ + CG G +DC DP DD + G P + DG CD + NT C YDGGDCC CTC+ D + S CG + C+DPDAP D P + C G I + DG CD NNNEECG+DGGDCC CTC +Y C C DP A C T C S DG CD N E+C +DGGDCC+ C S +T C+DP C D IT D+ C DG CD NNN CGYD GDCC C C D YECG+VGF C+D ++ C Sbjct: 38 RDGECDTHNNNAECEYDGGDCCSCTCQNDT-----YDCGVSG--FDCVDPSAECVDDDDIGTETVQNCGDP------WAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKE--TCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCL-DDFYECGIRGFACIDPSAECADDDDVTVDTVENCGVRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDT------------------CGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTCVD--GTYECGIVGFDCVDPSAEC 373
BLAST of mRNA_Ecto-sp13_S_contig10218.242.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE) HSP 1 Score: 170 bits (430), Expect = 2.190e-41 Identity = 131/361 (36.29%), Postives = 167/361 (46.26%), Query Frame = 1 Query: 415 GWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCQDPDVP--DDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYNSWGYYSSCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECE---GYIYMIGDGSCDYYNNNEECGWDGGDCCSCTC----EGSSYYSCSSYSMDCQDPDANCTTPSPTPY----CPWASDGYCDSYYNTEDCDWDGGDCCA----------YGCSSTTCLDPIYGCDSITTSYGDSDDSTST-----FITYVTSSDDSGCFDGDWAVSDGKCDSGNNNAACGYDGGDCCECDC-YDYGEVYECGVVG-----FYCLDQTSLCY 1395 G+DGGDCC CTC + + CG G + C DP DD +T A + D Y+ DG C D N C YDGGDCC CTC D + CGY + C+DP A AC D + A + C GY+ +G+G C+ NN EEC +D GDCC CTC + S +SC ++ C DP+A C T C DG+C+ Y N E C +DGGDCC +GC+ C+DP C D DD T+ I Y+ DG CD+ NNN C YDGGDCCEC C D +V +VG F C+D T+ C+ Sbjct: 18 GYDGGDCCECTC-----VDASFTCGYGG--FACIDPSAACVDDDNITEDIAESCN--DGGGYVASIGDGFCSDENNNEVCDYDGGDCCECTCVDA-----FYPCGYVAFACIDPSA--ACVDDDNITADIAES----CHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLSDFSCVDFA--CVDPNAPCVDDDVTEGMFEDCFNFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAPC-------VDDDDVTADALENCMIEYL---------------GDGYCDTYNNNEICDYDGGDCCECTCGSDSTDV----LVGSDCSDFVCIDPTASCF 330
BLAST of mRNA_Ecto-sp13_S_contig10218.242.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 166 bits (420), Expect = 2.660e-41 Identity = 145/424 (34.20%), Postives = 179/424 (42.22%), Query Frame = 1 Query: 394 DLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCQDPDVP--DDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYNSWGYYSSCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGSSYYSCSSYSMD-------CQDPDANCT-----TPSPTPYCPWASD---GYCDSYYNTEDCDWDGGDCCA----------------YGCSSTTCLDPIYGCDSITTSYGDSDDSTSTFITYVTSSDDSGCFDGDWAVSDGKCDSGNNNAACGYDGGDCCECDCYD-YGEVYECGVV--GFYCLDQTSLCYGSTSGGNFDSDDFYGDDDYDDRGAFSFTPTPVVVTEELSLPTYSEMSVSKTELG 1557 D NNA C +DGGDCC CTC ++ + CG+ G+ C DP+ P DD T + D +Y DG CD++ N C YDGGDCC CTC ++ + C+DP+AP DS T W IGDG C N EC +DGGDCCSCTCE S Y D C DP+A C T C + D G+CD N E C +DGGDCC Y C C+DP C D DD T + ++ G G + +G CD NN CGYDGGDCC C C Y + Y C F C D + C+G G SDDF DD S+ P TE L + +KTE+G Sbjct: 2 DNNNAACAYDGGDCCECTC----EDTPNNKCGRWS-GFACIDPEAPCVDDDSFT------VDMIDNCDYPGGIGDGWCDEDNNNELCAYDGGDCCECTCEGSEDDDWHCR----NFACVDPNAPCV-DDDSVTIDMIENCSWST------GIGDGYCSENLNTPECAYDGGDCCSCTCE-------SPYDDDWGCMWFACIDPEAACVDDDDITVDMFENCEYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPC-------VDDDDITVDMV------ENCGYVSG---IGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNASCFGEEPTG---SDDFSTDDQ-----PMSYEFVPWEETEALPTVDGAVEVGTKTEVG 372
BLAST of mRNA_Ecto-sp13_S_contig10218.242.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 164 bits (414), Expect = 6.750e-40 Identity = 158/511 (30.92%), Postives = 204/511 (39.92%), Query Frame = 1 Query: 331 SSEYLGCLG-----------YTNHIKDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCQDPDVP--DDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCR---DYNSWGYYSSCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGSS--------------------YYSCSSYSMDCQDPDANCTTP--------SPTPYCPW--------------------------------ASDGYCDSYYNTEDCDWDGGDCCA----------YGCSSTTCLDPIYGCDSITTSYGDSDDSTSTFITYVTSSDDSGCFDGDWAVSDGKCDSGNNNAAC---------GYDGGDCCECDC---YDYGEVYECGVV--GFYCLDQTSLCYGSTSGGNFDSDDFYGDDDYDDRGAFSF-----TPTPVVVTEELSLPTYSEMSVSKT 1548 SS LG LG + + DGYC NNAECG+DGGDCC CTC + ++ C + G G+ C DPD P DD +T A D G CD++ N CGYD GDCC CTC D + W Y SS G G+ C+DP AP D D E GY+ +GDG CD +NNNE CG+DGGDCC CTC C DP+A C +P+ C W DGYC+ N E C +DGGDCC+ + C++ C+DP C D D + F+ C ++ V D GN GYDGGDCC C C +D+ + Y C C D T+ C+G + G SDDF DDY ++ F T + V + + + T +E+ VS T Sbjct: 5 SSRLLGVLGAAAILSSVGACWEDGFGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNCVTSDLGN-------GYCDEDNNNEICGYDFGDCCECTCVSPWDDDDW-YCSSDGS-GFACIDPAAPCVDDDD-------VTIDMVENCGYVRGLGDGWCDDWNNNELCGYDGGDCCECTCVAPPANDDWDXXXXXXXXXXXXXXXXGACGGGFACIDPNAACVNDDDITVGMDTPSNKCGWRXXXXXXXXXXXXXXXXXXXXDMIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTCQNDFDDDWACTTFACIDPEAAC------VNDDDITVDMFVN---------C---EYPV-----DIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGTTG---SDDFTFHDDYQPT-SYEFVHWEETESLPTVIDAVEVGTKTEVGVSAT 472
BLAST of mRNA_Ecto-sp13_S_contig10218.242.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.480e-39 Identity = 124/332 (37.35%), Postives = 149/332 (44.88%), Query Frame = 1 Query: 415 GWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCQDPDVP--DDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYNSWGYYSSCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCE------GSSYY---SCSSYSMDCQDPDANCT-----TPSPTPYCPWAS--DGYCDSYYNTEDCDWDGGDCCAYGC-----------SSTTCLDPIYGCDSITTSYGDSDDSTSTFITYVTSSDDSGCFDGDWAVSDGKCDSGNNNAACGYDGGDCCECDC 1323 G+DGGDCC CTC S D++ + C G+ C DP P DD +T A +C + E+ DG CD N CGYDGGDCC CTC N+W SC C+DP AP D D E GY+ +G+G CD NNNE CG+DGGDCC CTC+ G+ Y C + C DP+A C T C + +G+CD N E C +DGGDCC C S C+DP C D S + V S G F W CD NN C YDGGDCCEC C Sbjct: 5 GFDGGDCCECTCVSVYDDDYS--CSSTDSGFACVDPTAPCVDDDDITIEQAL-----NC--FPREFGDGWCDQENNNEICGYDGGDCCECTC--VNAWDDDYSCAANSA-CIDPSAPCVDDDD-------VTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGN-GFACIDPNAPCVNDDDITLDIVENCDSVAVGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECGRWSGFACIDPEAPCV----------DEDSFTVDMVESCKYPGSFGNGW------CDEDNNIEECAYDGGDCCECTC 300
BLAST of mRNA_Ecto-sp13_S_contig10218.242.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 154 bits (390), Expect = 2.340e-37 Identity = 135/406 (33.25%), Postives = 168/406 (41.38%), Query Frame = 1 Query: 376 DGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCQDPDVP--DDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCR--DYNSWG--YYSSCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGSSYYSCSSYSMDCQDPDANCTTPSPTPYCPWASDGYCDSYYNTEDCDWDGGDCCAYGCSSTTCLDPIYGC---DSITTSYGDSDDSTSTFITYVTSSDDSGCFDGDWAVSDGKCDSGNNNAACGYDGGDCCECDCYD-YGEVYECGVVG--FYCLDQTSLCYGSTSGGNFDSDDFYGDDDYDDRGAFSFTPTPVVVTEELSLPTYSEMSVSKTELG 1557 DGYC NNAECG+DGGDCC CTC + + C + G G+ C DPD P + GVT + +C+ ++ DG CD N CGYDGGDCC CTC + W Y +CG G+ C+DP AP D D E + M GDG CD NNN C +DGGDCC CTCE P+ C G S C+DP C DS+T D+ D Y+ + +G CD NNN C YDGGDCCEC C + + Y C F C D + C+G + G SDDF DD S+ P TE L + +KTE+G Sbjct: 38 DGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQ-----ECD--FWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGE-GFACIDPSAPCVNDDD-------ITVDVDESCDAVGM-GDGYCDMDNNNAACAYDGGDCCECTCE----------------PNNKCG-----------------------------------GRSGFACIDPGAPCVDDDSVTVDMIDNCD-------YLR------------VMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPNASCFGEETTG---SDDFSTDDQ-----PMSYEFVPWEETEALPTVDGAVEVGTKTEVG 349 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10218.242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10218.242.1 >prot_Ecto-sp13_S_contig10218.242.1 ID=prot_Ecto-sp13_S_contig10218.242.1|Name=mRNA_Ecto-sp13_S_contig10218.242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=575bp EVSSTSVSQTTFYEGGARGVRTGLSHYIMARQGRPRPVRWLGLVVATCCCback to top mRNA from alignment at Ecto-sp13_S_contig10218:1476..5939+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10218.242.1 ID=mRNA_Ecto-sp13_S_contig10218.242.1|Name=mRNA_Ecto-sp13_S_contig10218.242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4464bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10218:1476..5939+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10218:1476..5939+ >mRNA_Ecto-sp13_S_contig10218.242.1 ID=mRNA_Ecto-sp13_S_contig10218.242.1|Name=mRNA_Ecto-sp13_S_contig10218.242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1725bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10218:1476..5939+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |