mRNA_Ecto-sp13_S_contig10216.240.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10216.240.1 vs. uniprot
Match: A0A6H5KH08_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH08_9PHAE) HSP 1 Score: 635 bits (1638), Expect = 3.720e-223 Identity = 338/376 (89.89%), Postives = 342/376 (90.96%), Query Frame = 1 Query: 1 LFVIMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQGRRARGGGGADGKMRGGAMFVVYGALGLAWVALWLPLVSDKPSSPASAADDAETPDVSATTANAGRIRPGRDAGEGALPSATPPPPAALVGAGEKTGVGVGSANGGSGGALPVETVALEGEEGGGAVAGEGGGGVWEGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKK 1128 LFVIMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQ AMF+ YGALGLAWVALWLPLVSDKPSSPASAADDAETPD SAT ANAGRIR GRDAG+G +PSATPPP AL GAGEKT VG+GSANGGSGGALPVETVALEGEEGGGA GV EGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKK Sbjct: 209 LFVIMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQ-----------------AMFLAYGALGLAWVALWLPLVSDKPSSPASAADDAETPDASATIANAGRIRSGRDAGDGIVPSATPPPAPALAGAGEKTAVGIGSANGGSGGALPVETVALEGEEGGGAXXXXXXXGVLEGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKK 567
BLAST of mRNA_Ecto-sp13_S_contig10216.240.1 vs. uniprot
Match: D8LQQ2_ECTSI (Similar to transporters, possibly for inorganic phosphate n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ2_ECTSI) HSP 1 Score: 624 bits (1608), Expect = 2.290e-219 Identity = 333/376 (88.56%), Postives = 338/376 (89.89%), Query Frame = 1 Query: 1 LFVIMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQGRRARGGGGADGKMRGGAMFVVYGALGLAWVALWLPLVSDKPSSPASAADDAETPDVSATTANAGRIRPGRDAGEGALPSATPPPPAALVGAGEKTGVGVGSANGGSGGALPVETVALEGEEGGGAVAGEGGGGVWEGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKK 1128 LFVIMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYS+TTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQ MF+ YGALGLAW+ALWLPLVSDKP SPASAAD AETPD SATTA+AGRIRPGRDAG G + SATP P AAL GAGEK VGVGSANGGSGGALPVETVALEGEEGGGA GV EGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKK Sbjct: 157 LFVIMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSETTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQ-----------------TMFLAYGALGLAWIALWLPLVSDKPRSPASAADAAETPDASATTASAGRIRPGRDAGGGVVSSATPSPQAALAGAGEKAAVGVGSANGGSGGALPVETVALEGEEGGGAAXXXXXXGVLEGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKK 515
BLAST of mRNA_Ecto-sp13_S_contig10216.240.1 vs. uniprot
Match: A0A836CCQ7_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCQ7_9STRA) HSP 1 Score: 305 bits (781), Expect = 6.230e-97 Identity = 180/370 (48.65%), Postives = 216/370 (58.38%), Query Frame = 1 Query: 13 MGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQGRRARGGGGADGKMRGGAMFVVYGALGLAWVALWLPLVSDKPSSPASAADDAETPDVSATTANAGRIRPGRDAGEGALPSATPPPPAALVGAGEKTGVGVGSANGGSGGALPVETVALEGEEGGGAVAGEGGGGVWEGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLV 1122 M LCFLVAV+CALDRVAMSVAIVPM + YSDTTKGLI+S FSWGYMA M+P+ VL PK + GVL+WS AQM SP AA + L TLLACRF MG+ EAVT+P+IQ IV++ VPQDQR+RWLALIISGLQ GTVLAY SP I+ + W G +F++YGA+GL W+ LW+PL D P S + A + A + P +G + VGV G + +AVPW ++ T+ IW+IA AHMAHNWGLYV+LAWLPTYF QEF LTL +SS ASVLPWVVGA GN AG AD L+ Sbjct: 1 MMLCFLVAVICALDRVAMSVAIVPMSGEFGYSDTTKGLIASAFSWGYMAFMIPAGVLGTFVNPKVVMGLGVLLWSIAQMASPHAAVLGLPTLLACRFAMGMSEAVTIPTIQEIVSQWVPQDQRTRWLALIISGLQAGTVLAYVASPTIITRFTWHG-----------------VFLIYGAMGLLWLMLWVPLAKDTPLRQLSTSKAA----AAIAMAEVAAVAPATGDEQGL----------------NQLAVGV--------------------------------AGAIDSLKAVPWHDFCTDKNIWAIAGAHMAHNWGLYVMLAWLPTYFNQEFGLTLSESSSASVLPWVVGAFVGNGAGWLADYLI 301
BLAST of mRNA_Ecto-sp13_S_contig10216.240.1 vs. uniprot
Match: I2CP14_NANGC (Anion transporter 2 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP14_NANGC) HSP 1 Score: 249 bits (635), Expect = 7.970e-74 Identity = 147/372 (39.52%), Postives = 202/372 (54.30%), Query Frame = 1 Query: 10 IMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQGRRARGGGGADGKMRGGAMFVVYGALGLAWVALWLPLVSDKP-SSPASAADDAETPDVSATTANAGRIRPGRDAGEGALPSATPPPPAALVGAGEKTGVGVGSANGGSGGALPVETVALEGEEGGGAVAGEGGGGVWEGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLV 1122 ++ L FL ++C+LDRVAMSVAI+PM + +S+TTKG +SSVFS GYM+SM+P+ +L + PK +T GV +WS AQ+LSP+AA V L +LL CRF MG EAV P++Q++V P RSR ++L+ SGL +G +LAY SP ++ W+ +F +YG LGL W+ALW+P ++KP SSPA P+E V EE GA+ VWE +VPWK++V++ +W++ AHMAHN+GLYVLLAWLPTYF Q + L L+QSS SV PW+ A+ N+AG GAD L+ Sbjct: 169 LLALSFLCMIICSLDRVAMSVAILPMSLEFGFSETTKGAVSSVFSLGYMSSMLPAGILATSYSPKNVLTLGVALWSLAQILSPSAAHVGLTSLLLCRFAMGAAEAVATPTVQSLVGNWFPSSIRSRVISLLASGLNLGVLLAYLASPTLIRLTSWED-----------------LFRIYGGLGLLWLALWIPFAAEKPPSSPA-----------------------------------------------------------------PLEGV----EEVPGALRQ-----VWESLVSVPWKDFVSSPALWAVTFAHMAHNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLI 449
BLAST of mRNA_Ecto-sp13_S_contig10216.240.1 vs. uniprot
Match: A0A7S1HN94_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HN94_HEMAN) HSP 1 Score: 207 bits (527), Expect = 4.260e-59 Identity = 139/375 (37.07%), Postives = 193/375 (51.47%), Query Frame = 1 Query: 4 FVIMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQGRRARGGGGADGKMRGGAMFVVYGALGLAWVALWLPLVSDKPSSPASAADDAETPDVSATTANAGRIRPGRDAGEGALPSATPPPPAALVGAGEKTGVGVGSANGGSGGALPVETVALEGEEGG--GAVAGEGGGGVWEGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLV 1122 + ++GLC L ++ +LDR+AMSVAIVP+ N + YSDT KG +SS+FS GY +++P ++ + PK + GV WS + +P AA + LLA R +G EAVT+P+IQ V+ VP++QRSR LAL+ S LQ GT+LA +P IV DW +F +G+LG W A W+P+ D P DD R+R G + +GS GS A +V LEG +GG AVA +A+PW ++ + +W+ AAH A+NWGLYV LAWLPTYF ++L L QSS S+LP+ GAV MAG AD ++ Sbjct: 13 YTVIGLCCLCGMISSLDRMAMSVAIVPLANEFGYSDTIKGSVSSIFSIGYTVALLPLALAQALASPKYIMLMGVSTWSLLTLATPAAAQAGIPYLLAARAGVGAAEAVTVPTIQTFVSRWVPKNQRSRALALLYSCLQSGTILALLVAPQIVQRGDWP-----------------MVFTAFGSLGFVWAAFWVPISQDYP-------DDTL------------RVRGGGE---------------------------IGSRRIGSPNARSPASVPLEGAQGGFGQAVASA---------KALPWSDFFQSRGLWAATAAHAANNWGLYVSLAWLPTYFNSVYDLDLAQSSFYSLLPYAAGAVTSGMAGVAADKML 315
BLAST of mRNA_Ecto-sp13_S_contig10216.240.1 vs. uniprot
Match: A0A7S0JGX8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JGX8_9EUKA) HSP 1 Score: 197 bits (500), Expect = 4.970e-54 Identity = 139/370 (37.57%), Postives = 183/370 (49.46%), Query Frame = 1 Query: 19 LCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQGRRARGGGGADGKMRGGAMFVVYGALGLAWVALWLPLVSDKPSSPASAADDAETPDVSATTANAGRIRPGRDAGEGALPSATPPPPAALVGAGEKTGVGVGSANGGSGGALPVETVALEGEEGGGAVAGEGGGGVWEGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKK 1128 LC +A +CALDRV MSVAI+PMG Y Y+D TKGLI+S FS GY ++P+ + PK + +G+L+WS AQ L+P AA + LLA R LMGVGEA +PSIQ I A V RS++ ++ S L +GT+ AY +P +V W + F VYG G+ A+WL L D+P SP DA G D LP P ++ + GSA GSGG L E A G+ VPW + ++ IW++AAAH A N+ LY L+WLPTYF EF L+ +S AS LP+V A+A AG D LV + Sbjct: 144 LCCAIASICALDRVVMSVAILPMGEQYAYTDMTKGLIASAFSLGYCLGLLPAGLASSATSPKLVLGSGLLLWSIAQALTPLAADSGVSPLLATRALMGVGEAAAIPSIQVIAANFVSARSRSQFWGILTSSLSLGTIGAYTFTPPLVAGSGWP-----------------SAFFVYGGAGVLLSAVWLLLGRDEPRSPIDCLPDA--------------CEVGDDGVTVRLPPTFP----------DRLELRTGSAAEGSGGPL-AELAARVGQ--------------------VPWSQMASSRPIWALAAAHSASNFFLYFALSWLPTYFAYEFGLSTAGASAASQLPFVAAAIASVSAGGVCDALVAR 451
BLAST of mRNA_Ecto-sp13_S_contig10216.240.1 vs. uniprot
Match: A0A836BAF5_9CHLO (MFS domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BAF5_9CHLO) HSP 1 Score: 195 bits (495), Expect = 1.140e-53 Identity = 126/373 (33.78%), Postives = 179/373 (47.99%), Query Frame = 1 Query: 10 IMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQGRRARGGGGADGKMRGGAMFVVYGALGLAWVALWLPLVSDKPSSPASAADDAETPDVSATTANAGRIRPGRDAGEGALPSATPPPPAALVGAGEKTGVGVGSANGGSGGALPVETVALEGEEGGGAVAGEGGGGVWEGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKK 1128 ++ LCF+ V+C LDRV MSVAI+PM + Y + T GL+ S F WGY+ + V VL +G + + GVL WS A L+P AA L LL R LMGVGE V MP++ A++A+ VP +RSR LAL+ SG+ IG+V+ SP +++ + WQ ++F V+G+LG+AW +W V P+ +S + E + A T N+ R EK G A+PW+ ++ ++W+I H HNWGL++LL W+P Y+ Q L L QS SVLPWV AV N+AG AD LV++ Sbjct: 128 VVALCFVAFVLCNLDRVNMSVAILPMASQYGWDAATMGLVQSSFFWGYLLTQVAGGVLADRYGGRLVLGLGVLWWSLATALTPVAAAAGLPALLLARCLMGVGEGVAMPAMNALLAKWVPGGERSRSLALVYSGMFIGSVVGLGASPHMLNAFGWQ-----------------SVFYVFGSLGVAWHFVWRSQVRSSPAEDSSLHPE-ERAYILANTPNSSR---------------------------EKAG-------------------------------------------AIPWRALLSRREVWAIILTHFCHNWGLFILLTWMPAYYNQVLGLNLTQSGLLSVLPWVAQAVMANVAGWAADGLVER 412
BLAST of mRNA_Ecto-sp13_S_contig10216.240.1 vs. uniprot
Match: A0A2K3DHY0_CHLRE (MFS domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DHY0_CHLRE) HSP 1 Score: 194 bits (494), Expect = 2.910e-53 Identity = 122/373 (32.71%), Postives = 176/373 (47.18%), Query Frame = 1 Query: 10 IMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQGRRARGGGGADGKMRGGAMFVVYGALGLAWVALWLPLVSDKPSSPASAADDAETPDVSATTANAGRIRPGRDAGEGALPSATPPPPAALVGAGEKTGVGVGSANGGSGGALPVETVALEGEEGGGAVAGEGGGGVWEGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKK 1128 ++GLCF+ V+C LDRV MSVAI+PM + + + T GL+ S F WGY+ + V VL +G + + GVL WS A L+P AA L TLL R LMG+GE V MP++ A++A+ VP +RSR LAL+ SG+ IG+V+ SP +V+ + WQ ++F V+G++G+ W +W V P+ + D E + A T N+ R G +PW+ ++ ++W+I H HNWGL++LL W+P Y+ Q L L QS SVLPWV AV N+AG AD LV++ Sbjct: 162 VVGLCFVAFVLCNLDRVNMSVAILPMASQFGWDAATMGLVQSSFFWGYLLTQVAGGVLADRYGGRLILGLGVLWWSLATALTPVAAAAGLPTLLVARCLMGIGEGVAMPAMNALLAKWVPGGERSRSLALVYSGMFIGSVIGLGASPHMVNNFGWQ-----------------SVFYVFGSMGVLWNVVWRSQVRSSPAEDPTLLPD-ERAYILANTPNSSRENAGN----------------------------------------------------------------------IPWRALLSRREVWAIILTHFCHNWGLFILLTWMPAYYNQVLGLNLTQSGLLSVLPWVAQAVMANVAGWAADNLVER 446
BLAST of mRNA_Ecto-sp13_S_contig10216.240.1 vs. uniprot
Match: D8U2V1_VOLCA (MFS domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U2V1_VOLCA) HSP 1 Score: 191 bits (484), Expect = 2.400e-51 Identity = 123/375 (32.80%), Postives = 178/375 (47.47%), Query Frame = 1 Query: 10 IMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQGRRARGGGGADGKMRGGAMFVVYGALGLAWVALWLPLVSDKPSSPASAADDAETPDVSATTANAGRIRPGRDAGEGALPSATPPPPAALVGAGEKTGVGVGSANGGSGGALPVETVALEGEEGGGAVAGEGGGGVWEG--FRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKK 1128 ++GLCF+ V+C LDRV MS+AI+PM + +S TT GL+ S F WGY+ + + VL WG K+ + GVL WS A +P AA L LL R +MG+GE V +P++ +++ + VP ++RSR LAL+ SG+ G+VL SP ++ + W A+F +G+LG+ W +W V+ PS DDA T T ++ + P GS EGG ++ F VPW ++ ++W++ H HNWGL++LL W+P Y+ Q L L QS SVLPWV AV N+AG AD LV + Sbjct: 173 VVGLCFVAFVLCNLDRVNMSIAILPMAEQFGWSTTTMGLVQSSFFWGYLLTQILGGVLADRWGGKSVLGFGVLWWSLATAATPAAAQAGLPALLLARCMMGIGEGVALPAMNSMLVKWVPAEERSRSLALVYSGMFTGSVLGLGASPQVLAAFGWP-----------------AVFWSFGSLGVLWYFIWQGSVTSAPS------DDASTNLTELATMDSNTLSP----------------------------------ENGSSXXXXXXXXXXXXXXXXXXXXPEGGQAGFDSSSFGGVPWSLLLSRKEVWALILCHFCHNWGLFILLTWMPAYYNQVLGLNLMQSGVLSVLPWVAMAVMANVAGWAADALVAR 490
BLAST of mRNA_Ecto-sp13_S_contig10216.240.1 vs. uniprot
Match: A0A836BWC9_9CHLO (MFS domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BWC9_9CHLO) HSP 1 Score: 184 bits (467), Expect = 1.810e-50 Identity = 121/373 (32.44%), Postives = 173/373 (46.38%), Query Frame = 1 Query: 10 IMGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASMVPSSVLIGVWGPKATITAGVLVWSAAQMLSPTAAGVSLETLLACRFLMGVGEAVTMPSIQAIVAERVPQDQRSRWLALIISGLQIGTVLAYWGSPVIVDTWDWQGRRARGGGGADGKMRGGAMFVVYGALGLAWVALWLPLVSDKPSSPASAADDAETPDVSATTANAGRIRPGRDAGEGALPSATPPPPAALVGAGEKTGVGVGSANGGSGGALPVETVALEGEEGGGAVAGEGGGGVWEGFRAVPWKEYVTNGQIWSIAAAHMAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKK 1128 ++ +CF+ V+C LDRV MSVAI+PM + + T GL++S F WGY+ + V VL G KA + GVL WS A +P AA + L LL R LMG+GE V MP++ A++A+ VP +RSR LAL+ SG+ G+V+ SP IV+ W ++F +G+LG+AW +W VS P A D E + ATT P T G A ++PW++ ++ ++W+I +H HNWGL++LL W+P Y+ Q L L +S SVLPW A+ N+AG AD L +K Sbjct: 32 VVAMCFVAFVLCNLDRVNMSVAILPMSQQFGWDAATMGLVNSSFFWGYLLTQVAGGVLADRVGGKAVLGLGVLWWSLATAATPVAASMGLPALLGARCLMGIGEGVAMPAMNAMLAKWVPISERSRSLALVYSGMFTGSVVGLGASPHIVNAMGWP-----------------SVFWWFGSLGIAWALVWFSQVSSTPREDARL-DPRERAFIEATT--------------------------------------------------PQNTT--------GRAA------------SIPWRQILSRKEVWAIILSHFCHNWGLFILLTWMPAYYNQVLGLNLTESGILSVLPWAAMALMANVAGWAADALAEK 316 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10216.240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10216.240.1 >prot_Ecto-sp13_S_contig10216.240.1 ID=prot_Ecto-sp13_S_contig10216.240.1|Name=mRNA_Ecto-sp13_S_contig10216.240.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=372bp MGLCFLVAVVCALDRVAMSVAIVPMGNVYDYSDTTKGLISSVFSWGYMASback to top mRNA from alignment at Ecto-sp13_S_contig10216:875..5932- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10216.240.1 ID=mRNA_Ecto-sp13_S_contig10216.240.1|Name=mRNA_Ecto-sp13_S_contig10216.240.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5058bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10216:875..5932- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10216:875..5932- >mRNA_Ecto-sp13_S_contig10216.240.1 ID=mRNA_Ecto-sp13_S_contig10216.240.1|Name=mRNA_Ecto-sp13_S_contig10216.240.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1116bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10216:875..5932- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |