mRNA_Ecto-sp13_S_contig10215.239.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10215.239.1 vs. uniprot
Match: D7G7W9_ECTSI (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W9_ECTSI) HSP 1 Score: 451 bits (1161), Expect = 3.370e-157 Identity = 218/232 (93.97%), Postives = 227/232 (97.84%), Query Frame = 1 Query: 1 QVIVPGEKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVLSDIMQFKETDPKDLQDMYNRCHLEDMSTPEEYIKWSKVHGLEFVEFVDMAENLATHFGSVRDVLESRRGNLEGVEDDFIDNMVKGIEAWISAAQRNLICWGYLTFTKPEEASSDDDPTDAISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAE 696 +VIVPGEKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMV SDIMQFKETDPKDLQD+YNRCHLEDMSTPEEYIKW KVHGLEFVEFVDMAENLATH+GSVRDVL SRRGNLEGVED+FIDNMV+GIEAWISAAQRNLICWGY+TFTKP++ SSDD+ TDAISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAE Sbjct: 119 KVIVPGEKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVFSDIMQFKETDPKDLQDVYNRCHLEDMSTPEEYIKWGKVHGLEFVEFVDMAENLATHYGSVRDVLVSRRGNLEGVEDEFIDNMVRGIEAWISAAQRNLICWGYMTFTKPDDDSSDDNATDAISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAE 350
BLAST of mRNA_Ecto-sp13_S_contig10215.239.1 vs. uniprot
Match: A0A6H5L7A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A2_9PHAE) HSP 1 Score: 450 bits (1157), Expect = 7.140e-155 Identity = 218/232 (93.97%), Postives = 226/232 (97.41%), Query Frame = 1 Query: 1 QVIVPGEKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVLSDIMQFKETDPKDLQDMYNRCHLEDMSTPEEYIKWSKVHGLEFVEFVDMAENLATHFGSVRDVLESRRGNLEGVEDDFIDNMVKGIEAWISAAQRNLICWGYLTFTKPEEASSDDDPTDAISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAE 696 +VIVPGEKSFF+TGLP+ASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMV SDIMQ ETDPKDLQD+YNRCHLEDMSTPEEYIKW KVHGLEFVEFVDMAENLATH+GSVRDVLESRRGNLEGVEDDFIDNMV+GIEAWISAAQRNLICWGYLTFTKP+EASSDD+ T AISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAE Sbjct: 6 EVIVPGEKSFFKTGLPNASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVFSDIMQLNETDPKDLQDVYNRCHLEDMSTPEEYIKWGKVHGLEFVEFVDMAENLATHYGSVRDVLESRRGNLEGVEDDFIDNMVRGIEAWISAAQRNLICWGYLTFTKPDEASSDDNATTAISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAE 237
BLAST of mRNA_Ecto-sp13_S_contig10215.239.1 vs. uniprot
Match: D7G5Z7_ECTSI (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Z7_ECTSI) HSP 1 Score: 358 bits (918), Expect = 7.610e-118 Identity = 164/231 (71.00%), Postives = 199/231 (86.15%), Query Frame = 1 Query: 4 VIVPGEKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVLSDIMQFKETDPKDLQDMYNRCHLEDMSTPEEYIKWSKVHGLEFVEFVDMAENLATHFGSVRDVLESRRGNLEGVEDDFIDNMVKGIEAWISAAQRNLICWGYLTFTKPEEASSDDDPTDAISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAE 696 VI+PGEKS+F+TGLPDA C+VV SQDALLH+G ERHR++ EAAR+LKPGGRMV +D+MQ DPKDLQ++Y R L+D+ TP+ Y KW++ +GL FVEF D ++ TH+ SV++VL S RG +G+ED+FIDNM +G++AW+SAA+R LICWGY+TF KP++ SSDD+ TDAISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAE Sbjct: 153 VIIPGEKSYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNHADPKDLQEVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPDDDSSDDNATDAISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAE 383
BLAST of mRNA_Ecto-sp13_S_contig10215.239.1 vs. uniprot
Match: A0A6H5KC33_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC33_9PHAE) HSP 1 Score: 348 bits (893), Expect = 2.300e-114 Identity = 165/232 (71.12%), Postives = 198/232 (85.34%), Query Frame = 1 Query: 1 QVIVPGEKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVLSDIMQFKETDPKDLQDMYNRCHLEDMSTPEEYIKWSKVHGLEFVEFVDMAENLATHFGSVRDVLESRRGNLEGVEDDFIDNMVKGIEAWISAAQRNLICWGYLTFTKPEEASSDDDPTDAISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAE 696 +VIVPGEKSFFETG+PDASCDVV SQDALLH+G ERHR++ EAARVLKPGGRMV +DIMQ KE DPKDLQ++Y R HL+DM+TPE Y KW K HGLEFVEFVDM +NLA H+G+VR+VL SRRGNL+GVED+FIDNM +G++AW SAA R+LI WG L FTKPE+AS+ + +AI+ATA+G+Y+SDNAFNFY +VWGGEHIHVGLY+KL E+AKL ++RI KAS L E Sbjct: 146 KVIVPGEKSFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQSKEADPKDLQEVYQRIHLDDMATPESYAKWGKAHGLEFVEFVDMTDNLALHYGAVREVLMSRRGNLDGVEDEFIDNMARGLDAWTSAAGRDLIRWGCLVFTKPEKASNTQNAANAIAATAKGYYDSDNAFNFYRQVWGGEHIHVGLYNKLEGEDAKLEGVERITKASSLGTE 377
BLAST of mRNA_Ecto-sp13_S_contig10215.239.1 vs. uniprot
Match: A0A6H5L6E6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E6_9PHAE) HSP 1 Score: 274 bits (700), Expect = 6.440e-88 Identity = 125/180 (69.44%), Postives = 153/180 (85.00%), Query Frame = 1 Query: 157 MVLSDIMQFKETDPKDLQDMYNRCHLEDMSTPEEYIKWSKVHGLEFVEFVDMAENLATHFGSVRDVLESRRGNLEGVEDDFIDNMVKGIEAWISAAQRNLICWGYLTFTKPEEASSDDDPTDAISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAE 696 MV +D+MQ DPKDL+D+Y R L+D+ TP+ Y KW++ +GL FVEF D ++ TH+ SV++VL S RG +G+ED+FIDNM +G++AW+SAA+R LICWGY+TF KPE+ASSDD+ TDAISATA+GWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRI+KASILNAE Sbjct: 1 MVFNDVMQTNHADPKDLKDVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPEKASSDDNATDAISATAKGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIEKASILNAE 180
BLAST of mRNA_Ecto-sp13_S_contig10215.239.1 vs. uniprot
Match: A0A835YZA4_9STRA (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA4_9STRA) HSP 1 Score: 176 bits (447), Expect = 4.840e-51 Identity = 79/162 (48.77%), Postives = 115/162 (70.99%), Query Frame = 1 Query: 1 QVIVPGEKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVLSDIMQFKETDPKDLQDMYNRCHLEDMSTPEEYIKWSKVHGLEFVEFVDMAENLATHFGSVRDVLESRRGNLEGVEDDFIDNMVKGIEAWISAAQRNLICWGYLTFTK 486 +V++PGE+SFFETG P + D V SQD+LLH+G ER R++ EAARVLKPGG +V +DIMQ + + +L +Y R HLEDM +P Y W++ GL+ V F D NLA H+G+V+ VLE++R L + ++DNM++G++AW++AA ++ +CWGY F K Sbjct: 130 KVLIPGERSFFETGEPAGAYDAVVSQDSLLHAGSERCRAIEEAARVLKPGGCLVFTDIMQSNDANTAELDAVYRRIHLEDMGSPASYQAWAERCGLKLVGFEDRTSNLAAHYGAVKGVLEAKRAELTNISPAYVDNMIRGLDAWVNAAGKSNLCWGYFLFRK 291
BLAST of mRNA_Ecto-sp13_S_contig10215.239.1 vs. uniprot
Match: D8LE22_ECTSI (Probable glycine-sarcosine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE22_ECTSI) HSP 1 Score: 146 bits (369), Expect = 1.270e-39 Identity = 68/162 (41.98%), Postives = 102/162 (62.96%), Query Frame = 1 Query: 1 QVIVPGEKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVLSDIMQFKETDPKDLQDMYNRCHLEDMSTPEEYIKWSKVHGLEFVEFVDMAENLATHFGSVRDVLESRRGNLEGVEDDFIDNMVKGIEAWISAAQRNLICWGYLTFTK 486 ++I+PGE+S+F+T +P AS D V SQDA H+ E HR++ EAARVLKPGG M SD MQ + DP L ++Y + +++P Y +W +GLE VEF D N + H+ + DV+ S RG ++GV+D+F+D M +W AA+ +++ WG + K Sbjct: 105 KIIIPGERSYFDTEMPAASMDAVLSQDAFGHASTEHHRAIKEAARVLKPGGVMAFSDFMQSDDADPTKLGEVYQHIGISRLASPGLYEEWGNAYGLEPVEFDDRTSNFSVHYQHLVDVIASLRGTIKGVDDEFLDRMTSRYGSWCVAAEFDVLRWGVIVLKK 266
BLAST of mRNA_Ecto-sp13_S_contig10215.239.1 vs. uniprot
Match: A0A5J4YL55_PORPP (Dimethylglycine N-methyltransferase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL55_PORPP) HSP 1 Score: 129 bits (325), Expect = 3.540e-31 Identity = 61/155 (39.35%), Postives = 101/155 (65.16%), Query Frame = 1 Query: 25 SFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVLSDIMQFKETDPKDLQDMYNRCHLEDMSTPEEYIKWSKVHGLEFVEFVDMAENLATHFGSVRDVLESRRGNLEG-VEDDFIDNMVKGIEAWISAAQRNLICWGYLTFTK 486 SF TGL DAS DVV S D++LH+GPER + +AEAAR+LKP GR+V SD MQ ++ D + L+ +Y+R L DM +P Y+++ +GL ++D+ ++++ H+ + + E+RR LE + ++D+M+ G++AW +A + +G + F K Sbjct: 394 SFTHTGLADASVDVVVSHDSILHAGPEREQVIAEAARILKPHGRLVFSDPMQCEDADSEALRAVYDRIQLADMGSPAAYVRFGAKYGLVHTGYIDLLDSMSRHYQVIAHITEARRPELENFISSAYLDSMLAGLKAWQTAVNAGQLRYGIMIFEK 548
BLAST of mRNA_Ecto-sp13_S_contig10215.239.1 vs. uniprot
Match: A0A8J9S2A7_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S2A7_PHATR) HSP 1 Score: 124 bits (311), Expect = 7.320e-31 Identity = 65/162 (40.12%), Postives = 101/162 (62.35%), Query Frame = 1 Query: 19 EKSFFETGLPDASCDVVASQDALLHSGPERHRS-MAEAARVLKPGGRMVLSDIMQFKETDPKDLQDMYNRCHLEDMSTPEEYIKWSKVHGLEFVEFVDMAENLATHFGSVRDVLESRRGNLEGVEDDFIDNMVKGIEAWISAAQRNLICWGYLTFTKPEEAS 501 E+S+ +PD S D+V S DALLH GPE ++ + EAARVL+PGG MV DIMQ + DP ++Q +Y+R HL + T Y + G EF +EN+A+H+G+VR+VL ++G++ V + F++ M G+ W A +N++ WG++T K E+ + Sbjct: 125 EESYLGVSVPDESVDLVISMDALLHVGPEGQKTAIKEAARVLRPGGWMVFCDIMQQEVVDPVEMQPIYDRIHLTKLGTVSNYQECLSESGFTKFEFEPHSENVASHYGTVREVLIEKKGDI-AVSEAFLNKMEAGLAVWKELAPQNIV-WGFMTAQKTEKVN 284
BLAST of mRNA_Ecto-sp13_S_contig10215.239.1 vs. uniprot
Match: A0A5M8FVB4_9GAMM (Methyltransferase domain-containing protein n=1 Tax=Thiohalocapsa marina TaxID=424902 RepID=A0A5M8FVB4_9GAMM) HSP 1 Score: 123 bits (309), Expect = 1.290e-30 Identity = 66/160 (41.25%), Postives = 94/160 (58.75%), Query Frame = 1 Query: 19 EKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVLSDIMQFKETDPKDLQDMYNRCHLEDMSTPEEYIKWSKVHGLEFVEFVDMAENLATHFGSVRDVLESRRGNLEG-VEDDFIDNMVKGIEAWISAAQRNLICWGYLTFTKPEE 495 E SF DAS D+V SQDA+LHSG R R +AEAARVL+PGG +V +D MQ + LQ + +R HL + +P Y + + GL ++F++ + L TH+ V D L+ R L G V D +I+ M+ G++ W+SA +CWG L F KP + Sbjct: 122 EGSFEAVPAADASFDLVWSQDAILHSG-HRDRVIAEAARVLRPGGELVFTDPMQADDCPADVLQPVLDRIHLSTLGSPAFYRQQAAKQGLRELDFIEHTDQLITHYSRVHDELQQNRERLRGLVSDTYIERMLAGLQHWVSAGNNGWLCWGILHFRKPAD 280 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10215.239.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10215.239.1 >prot_Ecto-sp13_S_contig10215.239.1 ID=prot_Ecto-sp13_S_contig10215.239.1|Name=mRNA_Ecto-sp13_S_contig10215.239.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=132bp MLSYTPGRSGTGPWPRQPACSSPGAGWCSRTSCSSKRPTPRTYRICTTGAback to top mRNA from alignment at Ecto-sp13_S_contig10215:1337..5945+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10215.239.1 ID=mRNA_Ecto-sp13_S_contig10215.239.1|Name=mRNA_Ecto-sp13_S_contig10215.239.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4609bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10215:1337..5945+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10215:1337..5945+ >mRNA_Ecto-sp13_S_contig10215.239.1 ID=mRNA_Ecto-sp13_S_contig10215.239.1|Name=mRNA_Ecto-sp13_S_contig10215.239.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=396bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10215:1337..5945+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |