Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 428 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 342 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462515.7933612-UTR-Ecto-sp13_S_contig10211:4727..4812 | 1681462515.7933612-UTR-Ecto-sp13_S_contig10211:4727..4812 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10211 4728..4812 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462515.8106055-CDS-Ecto-sp13_S_contig10211:4812..5154 | 1681462515.8106055-CDS-Ecto-sp13_S_contig10211:4812..5154 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10211 4813..5154 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10211.238.1 >prot_Ecto-sp13_S_contig10211.238.1 ID=prot_Ecto-sp13_S_contig10211.238.1|Name=mRNA_Ecto-sp13_S_contig10211.238.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
MSKSAQESREDTPVLRGDASVDARAYGKSLFAGETLRRSQQARSSGFSIL
PMQAVLSVVIAVKSTRRSRQILSPKEKVQNHSHLLSRLWFVSAERLAPQA
FSTRHPTLHNTSHQ back to topmRNA from alignment at Ecto-sp13_S_contig10211:4728..5154+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10211.238.1 ID=mRNA_Ecto-sp13_S_contig10211.238.1|Name=mRNA_Ecto-sp13_S_contig10211.238.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=427bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10211:4728..5154+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCCGGTGATAAGAGGAGTGGAACCGCCGCCTCCCCGTACATGGATGGATC
CTTCGTGACAATGATCGGTTGAGGTGTGCACAGACATGAGCAAGTCCGCA
CAGGAATCACGTGAGGATACGCCAGTCCTTAGAGGGGACGCGAGCGTGGA
CGCGAGAGCCTACGGTAAGAGCCTGTTTGCTGGCGAAACACTTCGCCGCT
CGCAGCAAGCACGGTCGTCTGGTTTTTCTATTCTACCAATGCAGGCTGTG
TTGTCGGTAGTAATTGCGGTCAAGAGCACACGAAGATCACGTCAAATTTT
GTCCCCTAAAGAGAAGGTGCAAAACCACTCGCACCTACTCAGTAGGCTTT
GGTTCGTCAGTGCAGAAAGGTTGGCTCCACAAGCCTTCTCGACAAGACAC
CCCACATTGCACAACACCTCTCACCAA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10211:4728..5154+ >mRNA_Ecto-sp13_S_contig10211.238.1 ID=mRNA_Ecto-sp13_S_contig10211.238.1|Name=mRNA_Ecto-sp13_S_contig10211.238.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=342bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10211:4728..5154+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCAAGTCCGCACAGGAATCACGTGAGGATACGCCAGTCCTTAGAGG
GGACGCGAGCGTGGACGCGAGAGCCTACGGTAAGAGCCTGTTTGCTGGCG
AAACACTTCGCCGCTCGCAGCAAGCACGGTCGTCTGGTTTTTCTATTCTA
CCAATGCAGGCTGTGTTGTCGGTAGTAATTGCGGTCAAGAGCACACGAAG
ATCACGTCAAATTTTGTCCCCTAAAGAGAAGGTGCAAAACCACTCGCACC
TACTCAGTAGGCTTTGGTTCGTCAGTGCAGAAAGGTTGGCTCCACAAGCC
TTCTCGACAAGACACCCCACATTGCACAACACCTCTCACCAA back to top
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