mRNA_Ecto-sp13_S_contig10210.234.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10210.234.1 vs. uniprot
Match: D8LIS7_ECTSI (Arginine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIS7_ECTSI) HSP 1 Score: 697 bits (1799), Expect = 5.130e-249 Identity = 358/369 (97.02%), Postives = 360/369 (97.56%), Query Frame = 1 Query: 1 QVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQASLPELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEGLGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNKAETEELKRSRTALCSGTADVIELGLGLLGIGTLDRL 1107 +VVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQA ELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEGLGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVN ETEE K SRTA CSGTADVIE GLGLLG+GTLDRL Sbjct: 248 EVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQADEVELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEGLGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNTGETEEFKGSRTAFCSGTADVIERGLGLLGMGTLDRL 616
BLAST of mRNA_Ecto-sp13_S_contig10210.234.1 vs. uniprot
Match: A0A7S2Y2C9_9STRA (Arginine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2C9_9STRA) HSP 1 Score: 487 bits (1253), Expect = 4.270e-164 Identity = 243/370 (65.68%), Postives = 301/370 (81.35%), Query Frame = 1 Query: 1 QVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQASLPELERVS-KVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEGLGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNKAETEELKRSRTALCSGTADVIELGLGLLGIGTLDRL 1107 +VVKLQ+GD E+ +AW +LCE SR+ F IYSLL +++ ERGESFYN LPDVV+DLE +GL +S+GA V+LEGF++RDG + PL+++K+DGGFMYSTTDLAAIRHRV E+ADR+LYV DVGQ SHF+QVFQVARRAG P+ +LQHVPFGLVQGEDGKKFKTR+G+TVKL DLLMEAV IA + KR +EG E + E ER++ +VVG+GAVKYADLSMNRES+YRFSY KMLSL GNTAPYMLYA+ RV+GI++K E +GD +G +I + E LAR LLRLPEVL +LE DL+PH+LC+Y+F++S +FN+FYE+CPVN AETEELKRSR ALC TA+VI+ GL LLGI T+D+L Sbjct: 407 EVVKLQSGDEENYKAWQLLCEISRQEFDQIYSLLNIKINERGESFYNEFLPDVVNDLEEKGLAVKSEGATCVFLEGFKNRDGQAMPLIIRKTDGGFMYSTTDLAAIRHRVEEEKADRILYVTDVGQSSHFSQVFQVARRAGILPDSTELQHVPFGLVQGEDGKKFKTRSGDTVKLKDLLMEAVNIATADMEKRYADEGQE-----MGEAERLAAQVVGLGAVKYADLSMNRESDYRFSYKKMLSLTGNTAPYMLYAYVRVKGIQRKGAEAVGDFTGGDIVLQEESEINLARKLLRLPEVLAELESDLYPHKLCEYLFDVSQKFNKFYESCPVNTAETEELKRSRVALCEVTANVIKKGLSLLGIDTVDKL 771
BLAST of mRNA_Ecto-sp13_S_contig10210.234.1 vs. uniprot
Match: A0A7S3XT34_HETAK (Arginine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT34_HETAK) HSP 1 Score: 460 bits (1183), Expect = 3.700e-157 Identity = 231/369 (62.60%), Postives = 287/369 (77.78%), Query Frame = 1 Query: 1 QVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQASLPELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEGLGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNKAETEELKRSRTALCSGTADVIELGLGLLGIGTLDRL 1107 +VVKLQAG+ E+ +AW LC SR FQ +Y LLGV + ERGESFYN LP VV DL +GL ES+GA+ V+LEG++++DGT PL+V+K+DGG+MYSTTDLAA+ R T E+ADR+LYV D GQGSHF QVF+VAR A PE +L HVPFGLVQGEDGKKFKTR+G+TVKL DLL EAVRIA E + +R E+G + E +K VG+GAVKYADLS+NRESNYRFSYAKML+LQGNTAPYMLYA+ RV+GI++KA EGL + +I + P+E +LA+ LL+ PE++E++E DL+P++LC+Y+FELS FNRFYE CPVN AET+ LKRSRTALC TA VI GLGLLGI T++RL Sbjct: 140 EVVKLQAGNEENMKAWRTLCAVSRAEFQALYDLLGVAVAERGESFYNPRLPGVVRDLREKGLAVESEGAQCVFLEGYQNKDGTPMPLIVQKTDGGYMYSTTDLAAVAQRATEEKADRILYVTDAGQGSHFKQVFEVARLAKLLPEETELTHVPFGLVQGEDGKKFKTRSGDTVKLKDLLEEAVRIATEDMAQRFAEDGKD----MDAEARAAAKAVGLGAVKYADLSLNRESNYRFSYAKMLALQGNTAPYMLYAYVRVKGIQRKALEGLDASADADIILQEPQELSLAKKLLKFPEIVEEVEADLYPNKLCEYLFELSQAFNRFYEACPVNTAETDALKRSRTALCGVTAGVIAKGLGLLGIDTVERL 504
BLAST of mRNA_Ecto-sp13_S_contig10210.234.1 vs. uniprot
Match: A0A835ZBM0_9STRA (Arginine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM0_9STRA) HSP 1 Score: 462 bits (1189), Expect = 3.210e-156 Identity = 239/372 (64.25%), Postives = 294/372 (79.03%), Query Frame = 1 Query: 1 QVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQASLPELER-VSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEG--LGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNKAETEELKRSRTALCSGTADVIELGLGLLGIGTLDRL 1107 +VV+LQAGD + RAW +LC+ SRR FQ IY +LGV+LEERGESFYN ML V+ +L GLL+ES+GA+VV++EG ++RD ++Q L+V+K+DGG+MYSTTDLAA++ R T ERADRVLYV D GQ SHF QVFQVARR+G AP +QLQHVPFGLVQGEDGKKFKTR+G+TVKL DLL EAVRIA E + KR EEG + E ER V++ VG+GAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYM+YA+AR+QGI+++AT + I + P E LAR LLRLPEVL +LE DL+P+RLC+Y+F+LS +FN+FYE CPVN A T+EL+ SR ALCS TA I+L LGLLGI +++L Sbjct: 270 EVVRLQAGDPDVLRAWRLLCDLSRREFQVIYDILGVKLEERGESFYNSMLGGVIEELREGGLLQESEGAQVVFIEGAKNRDDSAQALIVQKTDGGYMYSTTDLAAVKQRATQERADRVLYVTDSGQASHFDQVFQVARRSGLAPPSLQLQHVPFGLVQGEDGKKFKTRSGDTVKLKDLLDEAVRIAAEDMEKRLAEEG-----RGMGEEERAVARKVGLGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMMYAYARIQGIRRRATTSTPISTSDPPRIVLEHPAELTLARTLLRLPEVLTELERDLYPNRLCEYLFDLSQRFNQFYEGCPVNAAATDELRASRVALCSVTAATIKLSLGLLGIDVVEKL 636
BLAST of mRNA_Ecto-sp13_S_contig10210.234.1 vs. uniprot
Match: A0A6V1Q9W7_HETAK (Arginine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q9W7_HETAK) HSP 1 Score: 460 bits (1183), Expect = 4.800e-155 Identity = 231/369 (62.60%), Postives = 287/369 (77.78%), Query Frame = 1 Query: 1 QVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQASLPELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEGLGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNKAETEELKRSRTALCSGTADVIELGLGLLGIGTLDRL 1107 +VVKLQAG+ E+ +AW LC SR FQ +Y LLGV + ERGESFYN LP VV DL +GL ES+GA+ V+LEG++++DGT PL+V+K+DGG+MYSTTDLAA+ R T E+ADR+LYV D GQGSHF QVF+VAR A PE +L HVPFGLVQGEDGKKFKTR+G+TVKL DLL EAVRIA E + +R E+G + E +K VG+GAVKYADLS+NRESNYRFSYAKML+LQGNTAPYMLYA+ RV+GI++KA EGL + +I + P+E +LA+ LL+ PE++E++E DL+P++LC+Y+FELS FNRFYE CPVN AET+ LKRSRTALC TA VI GLGLLGI T++RL Sbjct: 292 EVVKLQAGNEENMKAWRTLCAVSRAEFQALYDLLGVAVAERGESFYNPRLPGVVRDLREKGLAVESEGAQCVFLEGYQNKDGTPMPLIVQKTDGGYMYSTTDLAAVAQRATEEKADRILYVTDAGQGSHFKQVFEVARLAKLLPEETELTHVPFGLVQGEDGKKFKTRSGDTVKLKDLLEEAVRIATEDMAQRFAEDGKD----MDAEARAAAKAVGLGAVKYADLSLNRESNYRFSYAKMLALQGNTAPYMLYAYVRVKGIQRKALEGLDASADADIILQEPQELSLAKKLLKFPEIVEEVEADLYPNKLCEYLFELSQAFNRFYEACPVNTAETDALKRSRTALCGVTAGVIAKGLGLLGIDTVERL 656
BLAST of mRNA_Ecto-sp13_S_contig10210.234.1 vs. uniprot
Match: A0A7S1HF10_HEMAN (Arginine--tRNA ligase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HF10_HEMAN) HSP 1 Score: 445 bits (1145), Expect = 6.400e-149 Identity = 227/369 (61.52%), Postives = 288/369 (78.05%), Query Frame = 1 Query: 1 QVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQASLPELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEGLGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNKAETEELKRSRTALCSGTADVIELGLGLLGIGTLDRL 1107 +VV LQ GD S +AWG+LCEASR FQ IY +L ++LEERGESFYN L DV++ L+ +GL E+S+GA VVY+EG+ +++G PLLV+KSDGGFMYSTTDLAAIRHR+ E ADRVLYV D GQG+HF QVF+VA AG+ P G +L+HVPFGLVQGEDGKKF TR+GETVKL DLL E++RIA + +R+R E +G + + E+E +++VG+ AVKYADLSMNRESNYRFSY KML+L GNTAPYMLYA+ARV GI +K + + D SG EI + P E ALAR LL LPEVL ++E L+PH+LC+Y+FELS +FN+FYE+CPV++A + EL SR +LC+ TA I L LG+LGI T++RL Sbjct: 323 EVVALQGGDELSLKAWGLLCEASRVEFQKIYDMLDIQLEERGESFYNPFLGDVITGLKDKGLYEQSEGAGVVYVEGYTNKEGDRMPLLVQKSDGGFMYSTTDLAAIRHRMVEEEADRVLYVTDAGQGNHFDQVFKVAESAGWVPSGKRLEHVPFGLVQGEDGKKFATRSGETVKLKDLLDESIRIASDDMRERMEADGKDFDK----EMEDTARIVGLAAVKYADLSMNRESNYRFSYKKMLALTGNTAPYMLYAYARVNGIYRKLGDQV-DASGAEILLEEPAERALARHLLMLPEVLCEVEHSLYPHKLCEYLFELSQRFNQFYESCPVSQAGSPELLNSRASLCAVTARAIGLSLGILGIPTVNRL 686
BLAST of mRNA_Ecto-sp13_S_contig10210.234.1 vs. uniprot
Match: A0A7S2DLN2_9STRA (Arginine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLN2_9STRA) HSP 1 Score: 440 bits (1132), Expect = 1.980e-147 Identity = 237/393 (60.31%), Postives = 293/393 (74.55%), Query Frame = 1 Query: 4 VVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEES--DGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRRE---EEGGE---------------GYQASLPELE----RVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEGLG-DLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNKAETEELKRSRTALCSGTADVIELGLGLLGIGTLDRL 1107 VV+LQ G+ ES AW LCE SR F IY +LGVE+EERGESFYN +LP ++ DL G L+E+ +GA V LEGF+SRDG +QPL+V+K DGGFMY++TDLAAIR RVT E+ADRVLYV D+GQ +HF QVFQVARRAGF P V+L+HVPFGLVQGEDGKKFKTRAG+TVKL DLL EAV +A + IR R E EE GE G A+ L+ ++K +GIGAVKYADLS+NRESNYRFSY KML+L GNTAPYMLYA+AR+QGI+++++E L D++ I + E ALAR LLR PEVL+ LE DL+P++LCD++FE S +FN+FYENCPV AET+EL+ SRTALC+ TA +++ L LLGIG +DRL Sbjct: 261 VVELQGGNPESLAAWTTLCEISRVEFAKIYDVLGVEVEERGESFYNPLLPGMIEDL---GELKETLDNGALCVMLEGFDSRDGGAQPLIVRKGDGGFMYASTDLAAIRQRVTEEKADRVLYVTDIGQSTHFEQVFQVARRAGFVPSSVKLEHVPFGLVQGEDGKKFKTRAGDTVKLKDLLDEAVSMASKDIRGRSEATSEEAGETAAXXXXXXXXXXGGGGVANTDYLDDSAAELAKTIGIGAVKYADLSLNRESNYRFSYNKMLALNGNTAPYMLYAYARIQGIRRRSSESLDVDITDAPIILEHDAERALARQLLRFPEVLQRLERDLYPNQLCDFLFETSQKFNQFYENCPVINAETDELRASRTALCATTAQLLQKSLELLGIGVVDRL 650
BLAST of mRNA_Ecto-sp13_S_contig10210.234.1 vs. uniprot
Match: L1JPT8_GUITC (Arginine--tRNA ligase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JPT8_GUITC) HSP 1 Score: 436 bits (1122), Expect = 6.180e-146 Identity = 221/369 (59.89%), Postives = 280/369 (75.88%), Query Frame = 1 Query: 1 QVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQASLPELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEGLGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNKAETEELKRSRTALCSGTADVIELGLGLLGIGTLDRL 1107 +VV LQAGDA S W +LCEASR+ FQ +Y +L V LEERGESFYN ML DV+S L+ LL+ES+GA+VVY++G++++DG P LV+KSDGG++YSTTDLAAIRHRV E+ADR+LYV D GQ +HF Q +AR+AG+ P V L+HVPFGLVQGEDGKKFKTR+G+TVKL DLL EA+ A + +R+R +A E ER +++VG+ AVKYADLSMNRESNYRFSY KML+L GNTAPYMLYAFAR+ GI++K + S +I + P E LAR L+ LPE+L D+E L+PHRLC+Y+FELS +FN+FYENCPV A +EE K+SR ALCS TA+ ++L L LLGI T++RL Sbjct: 289 EVVALQAGDATSLSGWSILCEASRKEFQVVYDMLNVRLEERGESFYNNMLSDVISGLKEIELLKESEGARVVYVDGYKNKDGDPMPFLVQKSDGGYLYSTTDLAAIRHRVQKEKADRILYVTDAGQSTHFDQARCIARQAGWVPSHVSLEHVPFGLVQGEDGKKFKTRSGDTVKLRDLLDEAIVRASKDLRER--------LEADNKETERTARIVGLAAVKYADLSMNRESNYRFSYDKMLALSGNTAPYMLYAFARINGIRRKIGSEIKLDSSCKIILDHPAEMFLARHLVYLPELLLDVEKSLYPHRLCEYIFELSQRFNQFYENCPVANAPSEEEKKSRLALCSATANTLQLVLNLLGIDTVERL 649
BLAST of mRNA_Ecto-sp13_S_contig10210.234.1 vs. uniprot
Match: A0A4D9D2H1_9STRA (Arginine--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2H1_9STRA) HSP 1 Score: 430 bits (1105), Expect = 1.810e-144 Identity = 220/374 (58.82%), Postives = 279/374 (74.60%), Query Frame = 1 Query: 1 QVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQASLPELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEG-----LGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNKAETEELKRSRTALCSGTADVIELGLGLLGIGTLDRL 1107 +VV LQ G+ + +AW LC+ SR FQ IY LGV+LEERGESFYN +L V+SDL++ GLL+ES+GA+VVYL+G+++R+G +QP +V+KSDGGF+Y+TTDLAA RHR E+A+R+LYV D GQ SHF QVFQVAR+A P VQL+HVPFGLVQGEDGKKFKTRAGETV+L DLL EAVRIA + + KR EE G Q +LER ++++G+GAVKYADLS+NRES+Y+FSY KMLSL GNTAPYMLYA+AR+Q I +K G L S + + P E LAR L++L E+L +E +L+PH LC+YM++L +FN+FYE C VN A T EL RSR ALC TA V+ L L LLGI L+R+ Sbjct: 198 EVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVDLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLDGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKRAEE----GTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSSPPVVLAEPAEMNLARQLIKLTELLLRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPELVRSRRALCVLTAQVLRLCLDLLGIEVLERM 567
BLAST of mRNA_Ecto-sp13_S_contig10210.234.1 vs. uniprot
Match: W7TNC1_9STRA (Arginine--tRNA ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNC1_9STRA) HSP 1 Score: 430 bits (1106), Expect = 9.320e-143 Identity = 220/374 (58.82%), Postives = 279/374 (74.60%), Query Frame = 1 Query: 1 QVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQASLPELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEG-----LGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNKAETEELKRSRTALCSGTADVIELGLGLLGIGTLDRL 1107 +VV LQ G+ + +AW LC+ SR FQ IY LGV LEERGESFYN +L V+SDL++ GLL+ES+GA+VVYLEG+++R+G +QP +V+KSDGGF+Y+TTDLAA RHR E+A+R+LYV D GQ SHF QVFQVAR+A P VQL+HVPFGLVQGEDGKKFKTRAGETV+L DLL EAVRIA + + KR EE G Q +LER ++++G+GAVKYADLS+NRES+Y+FSY KMLSL GNTAPYMLYA+AR+Q I +K G L S + + P E LAR L++L E+L+ +E +L+PH LC+YM++L +FN+FYE C VN A T +L RSR ALC TA V+ L L LLGI L+R+ Sbjct: 340 EVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVRLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKRAEE----GTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM 709 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10210.234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10210.234.1 >prot_Ecto-sp13_S_contig10210.234.1 ID=prot_Ecto-sp13_S_contig10210.234.1|Name=mRNA_Ecto-sp13_S_contig10210.234.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=370bp QVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLback to top mRNA from alignment at Ecto-sp13_S_contig10210:491..5873- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10210.234.1 ID=mRNA_Ecto-sp13_S_contig10210.234.1|Name=mRNA_Ecto-sp13_S_contig10210.234.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5383bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10210:491..5873- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10210:491..5873- >mRNA_Ecto-sp13_S_contig10210.234.1 ID=mRNA_Ecto-sp13_S_contig10210.234.1|Name=mRNA_Ecto-sp13_S_contig10210.234.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1110bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10210:491..5873- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |