mRNA_Ecto-sp13_S_contig1021.232.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1021.232.1 vs. uniprot
Match: D7FW61_ECTSI (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW61_ECTSI) HSP 1 Score: 1924 bits (4983), Expect = 0.000e+0 Identity = 1013/1058 (95.75%), Postives = 1026/1058 (96.98%), Query Frame = 2 Query: 95 MVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGEEVLGLLRKFPQACSNVLHQVPSSLSPGNSDLSGTDVREDAAARHEMEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCRSSWTDLSSTFSTGMDSGVAAFLRGHVTYVEQFPRRILSAGTRLLTRSCNTLETAGALTAILQLQALEDANPLRCLLELLLRRRGGAVVAMLTRATKEENSAQVEQVLHAAVTTVQRTIVDVHAIFAPGRNGSCMLEDLAHPSYRSQASLRLSAHDAKDMCTTWLSVLTPKIRAFSERLLRATGDTNSLARIRGSLWKATHGDGAWATPAAGTRVGGSIRAVEGPMWMEATSFTVNVSAFDGGTNDSTRAWRQDVSSPQLDLWSLLFSQIFAELAEALLKDSLASIRRDVECRLDSILLAITRNETGQGVQKARSSSGSHRQEQPHALMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAADLANHLRIALQEIHACIKSTAEQERRCVPYGGGIGDLENAVSSFADAGLLIGRVAWMLNGRSGQPLQYALTPPACFAQRRRGRIEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFGASAALAVDPSRYASFTLNEFFLFATRLLEEQRPRQHLTSCLDTLLSESLAVWSEWALEKSAALLTEGCNALAILCSNPGMTNDLWRQAHGIWEDKTIELDRDDGDGIQETVHFPIMVSPAILCYIEGVAAELSRILSTADLIERAVTESCSGWKTQDAQSPGYAERALGWSAPGKATVQGAARYARSLAAVRASSDLSHALIGLCEGAQSAAAQACEAAQLQLLLDALFLQKWVSDSPKSSPSMDSVVTILCDLVDPINLQIYMPHLQTAASACWAACHTPLSLIFEQATPSSSAPSSASVSPDGALGSSSSFIPLAPKARRFEILPLSLDVVRLQHPNGSSRSRNSVGIKSGAPASGDGPGASAQARGLEAGRQALAGLGSVLSAQNAHVQSVFGAASLFLGGRNRRGEDGDGHSER 3268 MVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETG EVLGLLRKFPQACSNVL QVPSSLSPG SDLSGTDVREDAAARH MEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCRSSWTDLSSTFSTG+DSGVAAFLRGHVTYVEQFPRRILSAGTRLLTRSCNT ETAGALTAILQLQALEDANPLRCLLELLL RRGGAVVAMLTRATKEENS+ +EQVLHAAVTTVQRTIVDVHAIFAPGRNGSCMLEDLAHPS RSQASLRLSAHDAKDMCTTWLSVLTPKIR F ERLLRATGDTNSLARIRGSLWK THGDGAWATPAAGTR GGSIRAV+G MWMEATSF V+VSA+DGGTN STRAW QDVSSPQLDLWSLLFSQIFA+LAEALLKDSLASIRRDVECRLDSILLAITRNETGQGVQ+ARS SGSHRQEQPHALMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAA LANHLRIALQEIHACIKS AEQERRCVPYGG IGDLENAVSSFADAGLLIGRVAWMLNGRSG PLQYALTPPACFAQRRRGRIEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFGASAALAVDPSRYASFTLNEFFLFATRLLEEQRPRQHLTSCLDTLLSESLAVWSEWALEKSAALLTEGCNA+ ILC+NPGMTNDLWRQAHGIWEDKTIELDRDDGDGIQETVHFPIMVSPAILCYIEGVAAELSRILSTADL ERAVTESCSGWKTQDAQ G ERALGWSAPGKAT QGAARYARSLAAVRASSDLSHAL+GLCEGA SAAAQACEAAQLQLLLDALFLQKWVSDSPKSSPSM+SVVT LCDLVDPINLQIYMPHLQTAASACWAACHTPLSLIFEQA PSSSAPSSASVSPDGALGSSSSFIPLAPK RRFEILPLSL+VVRLQHPNGSSRSRNSVGIKSGAPASGDGPGASAQARGLEAGRQALAGLGSVLSAQNAHVQSVFGAASLFLGGRNRRGEDGDGHSER Sbjct: 1 MVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGAEVLGLLRKFPQACSNVLQQVPSSLSPGTSDLSGTDVREDAAARHVMEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCRSSWTDLSSTFSTGVDSGVAAFLRGHVTYVEQFPRRILSAGTRLLTRSCNTQETAGALTAILQLQALEDANPLRCLLELLLLRRGGAVVAMLTRATKEENSSDIEQVLHAAVTTVQRTIVDVHAIFAPGRNGSCMLEDLAHPSCRSQASLRLSAHDAKDMCTTWLSVLTPKIRVFGERLLRATGDTNSLARIRGSLWKVTHGDGAWATPAAGTRAGGSIRAVQGLMWMEATSFAVDVSAWDGGTNGSTRAWGQDVSSPQLDLWSLLFSQIFADLAEALLKDSLASIRRDVECRLDSILLAITRNETGQGVQEARSFSGSHRQEQPHALMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAAGLANHLRIALQEIHACIKSAAEQERRCVPYGGRIGDLENAVSSFADAGLLIGRVAWMLNGRSGGPLQYALTPPACFAQRRRGRIEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFGASAALAVDPSRYASFTLNEFFLFATRLLEEQRPRQHLTSCLDTLLSESLAVWSEWALEKSAALLTEGCNAMVILCANPGMTNDLWRQAHGIWEDKTIELDRDDGDGIQETVHFPIMVSPAILCYIEGVAAELSRILSTADLTERAVTESCSGWKTQDAQPSGDEERALGWSAPGKATGQGAARYARSLAAVRASSDLSHALVGLCEGAHSAAAQACEAAQLQLLLDALFLQKWVSDSPKSSPSMESVVTTLCDLVDPINLQIYMPHLQTAASACWAACHTPLSLIFEQAIPSSSAPSSASVSPDGALGSSSSFIPLAPKVRRFEILPLSLEVVRLQHPNGSSRSRNSVGIKSGAPASGDGPGASAQARGLEAGRQALAGLGSVLSAQNAHVQSVFGAASLFLGGRNRRGEDGDGHSER 1058
BLAST of mRNA_Ecto-sp13_S_contig1021.232.1 vs. uniprot
Match: W7TQZ7_9STRA (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQZ7_9STRA) HSP 1 Score: 153 bits (387), Expect = 8.130e-34 Identity = 227/938 (24.20%), Postives = 367/938 (39.13%), Query Frame = 2 Query: 125 MSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGEEVLGLLR-KFPQACSNVLHQ--VPSSLSPGNSDLSGTDVREDAAARHE------MEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCR-------------SSWTDLSSTFSTGMDS-----------------GVAAFLRGHVTYVEQFPRRILSAGTRLLTRSCNTLETAGALTAILQLQALEDANPLRC----LLELLLRRRGGAVVAMLTRA------TKEENSAQVEQVLHAAVTTVQRTIVDVHAIFAPGRNGSCMLEDLAHPSYRSQASLRLSAHDAKDMCTTWLSVLTPKIRAFSERLLRATGDTNSLARIRGSLWKATHGDGAWATPAAGT-----RVGGSIRAVEGPMWMEATSFT-------------------VNVSAFDGGTNDSTRAWRQDVSSPQ-----------------------LDLWSLLFSQIFAELAEALLKDSLASIRRDVECRLDSILLAITRNETGQGVQKARSSSGSHRQEQPHALMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAADLANHLRIALQEIHA----CIKSTAEQER--------RCVPYGGGIGDLENAVSSFADAGLLIGRVAWMLNGRSGQPLQYALTP--------------PACFA--------QRRRGR--------IEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFGASAALAVDPSRY--ASFTLNEFFLFATRLLEEQRPRQHLTSCLDTLLSES----LAVWSEWALEK-SAALLTEGCNALAILCS---NPGMTN---DLWRQAHGIWEDKTIELDRDDGDGIQETVHFPIMVSPAILCYIEGVAAELSRILSTADLIERAVTESCSGWKTQD 2485 ++VE+ + TLS + KQTE+QL+VGSRYHELIESAD+++ M ++ + +L + P +++L + + S L P + ++ + E V MLHAP +W A+D+ + L AA+ + +S + S+G DS V + ++ I+S G L N L+ A++ L L+DA L+ L L RRG + A+ KE S V L AV ++RT++D H +F G ED A LR + + T WL K+ + + R L+ ++ LAR+R +LW+ TH P G + G S + V +W EA V+ + DG T + R+ + +S LD+W+ LFS FA + E L + S+ S+ + + + IL ++ S S S Q A ++ AAD + L +R + A L + GD+ AA AL +S + ++ + + L++ R LQE ST Q+ +P + + S DA L++ R AW L + + L +P C + RRRG I+ QLE+AF IAD+ G+G + E E L + G S A + PS Y +S T E L L+E +P T+ L + L W+ + +L EG L + + N GM + D R WE++ + + ++G +++ + P SP + + +AAEL R+ D I+ E G + +D Sbjct: 12 LTVERVRREMKTLSEGIQAKQTEIQLIVGSRYHELIESADAVLDMCKSCNNLQHILTMEVPPVVADLLQEKRLHSHLRPWREVAAAAIAQQQERQQQPGAFPLTREDVVYMLHAPTRLWEAMDAGRYLAAASTWTTAKDIADKIAEQAASAASTNTSNPALSSGDDSIRDDEEGRMRKWTATQRQVQLVIGNQWACLKDLKSSIIS-GAHALLADQNVLDVRQHGLALVSLARLDDAIASGARETGLVTLFLERRGQWLEALSGEGGGVHGEDKETLSGHVLSKLTRAVQALKRTVLDAHTLFIVGEESGASEEDQA------LRDLRRAGRIVAEATTAWLGGWLVKVHSQAHRSLKTLKSSSDLARVRKALWQETHAS--LVGPGLGEDGQREQSGRSPKGVR--LWREACRAVIHPESLRQALSKANLPCCWVSTPSLDGATEEKGRSEPGERASSAHAFAHRSRASVLGHVAVVGANDGLDVWASLFSTSFAAMLEDLFQASMTSLYQTWVGKFERILSVVS-----------SSPSSSSSLGQDRRFTAIEMAWAADHLYCCLVKGLRQIHRHARELVQDGDEAAAAALGSSLHAQTLSLLSRLSSFSRSWLQEWDGRCPLSSPSTLNQQSIHQDALSPASLPSSSSL--TPPSCPSDMDAVLILARFAWRLLTTAPRTLLSPFSPVEPPIPDPLDASEDSVCNSGSRMNVKESRRRGSGTSGKVRSIDMVQLESAFTIADSRGEGELTPAELHECLDTL--GLSQASSSPPSSYPPSSATFAEVVLLCYAALDEDQPADPATAYLQDAFGRTFDLGLRAWARHTVRSLGERVLGEGGQGLGLEGAERRNGGMESRDKDSVRSRRPGWEERVLVQEDEEGRPLEDRIWIPTTPSPPLSVFCFSLAAELGRVAQGQDGIKGKSGEGELGGREED 923
BLAST of mRNA_Ecto-sp13_S_contig1021.232.1 vs. uniprot
Match: A0A836CMC2_9STRA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC2_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.920e-30 Identity = 150/544 (27.57%), Postives = 215/544 (39.52%), Query Frame = 2 Query: 53 RVKMYGPSPATVGAMVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGEEVLGLLRKFPQACSNVL---------------HQVPSSLSPGNSDLSGTDVREDAAARHEMEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCRS-------SWTDLSSTFSTGMDSGV--AAFLRGHVTYVEQFPRRILSAGTRLLTRSCNTLETAGALTAILQLQALEDANP----------------LRCLLELLLRRRGGAVVAMLTRA---TKEENSAQV----EQVLHAAVTTVQRTIVDVHAIFAPGRNGSCMLEDLAHPSYRSQASLRLSAHDA-------------------------------------KDMCTTWLSVLTPKIRAFSERLLRATGDTNSLARIRGSLWKATHGDGAWATPAAGTRVGGSIRAVEGPMWMEATSFTVNVSAFDGGTNDSTRAW-RQDVSSPQ---------LDLWSLLFSQIFAELAEALLKDSLASIRRDVECRLDSIL 1402 R + P P + V ERALE+ + E A +LL + V KQ EL+ MV SRYHELIESADS+V+M++ EVL LL P C ++L H L G SD S +D+ V+LML+APAA+W+ALD+ +LEAA + +RC + + D S + G AAF++ + QFP RI LL+RS A A+ A+ L L D P L R A+ A L A + S E+ L AAV ++ T++DVHA F G + RS+ + L A + + + + WL+ L P++ + +L LA +R +LW T G P G G A V V G W R+ P LDLW+LLFS+ FAEL + ++K S+A ++ +D+ + Sbjct: 18 RSEAASPEPPSTHVTVPIERALEYATAEDARALLVKAAEDVGVKQAELRGMVSSRYHELIESADSVVAMQQLTSEVLSLLDALPTDCRHLLKLGAQVLEPHHLEDQHPPRKPLQTGKSDSSAVSANQDST-------VRLMLNAPAAIWSALDAGHLLEAATIFMRCAAVMRGGAAAAADQSVPLVQQLRQGSVDAAFVQAQWACMLQFPARISHTALALLSRSA----AAAAVDALAALVLLHDHLPHGSNGDSSSGNDSGDAYHHAFRTFLAAREAAIAAALRGARGGAAADGSVPADRSRERALCAAVQLLRATLLDVHAAFVTG-------------TLRSRVAAALEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGEGEWRRVLSQWLAALLPRVHRRAAAVLGGAHGAAELAAVREALWTVTRNGGGGHAPTGGRSEWGVACAAL------VDRGAVEVGLVRAGVVGGGGRWGRRGARGPPVGGGYDDAGLDLWALLFSRTFAELGQGMVKSSMAQVKAQALAHIDAAI 531
BLAST of mRNA_Ecto-sp13_S_contig1021.232.1 vs. uniprot
Match: A0A7S3YF54_HETAK (Conserved oligomeric Golgi complex subunit 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF54_HETAK) HSP 1 Score: 75.9 bits (185), Expect = 2.660e-12 Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 107 ERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGEEVLGLLRKFPQACSNVLHQVPSSL 346 E+ LE + +E+ +L + V KQTELQLMVGSRYHE+I+SADSIV MKE ++V+ LL FP+ ++ VP +L Sbjct: 47 EKILESLPIEEVQRMLKDSNRNVQTKQTELQLMVGSRYHEIIDSADSIVEMKEEVQQVVELLIAFPKDYKGLVENVPKAL 126
BLAST of mRNA_Ecto-sp13_S_contig1021.232.1 vs. uniprot
Match: A0A8J1TYT1_OWEFU (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TYT1_OWEFU) HSP 1 Score: 82.0 bits (201), Expect = 6.620e-12 Identity = 90/385 (23.38%), Postives = 162/385 (42.08%), Query Frame = 2 Query: 86 VGAMVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGEEVLGLLRKFPQACSNVLH-QVPSSLSPGNSDLSGTDVREDAAARHEMEV---VQLMLHAPAAMWAALDSNKVLEAANLVLRCRSSWTDLS--STFSTGMDSGVAAFLRGHVTYVEQFPRRILSAGTRLLTRSCNTLETAGALTAILQLQALEDANPLRCLLELLLRRRGGAVVAMLTRATKEENSAQVEQVLHAAVTTVQRTIVDVHAIF-------------------------APGRNGSCMLEDLA---------------HPSYRSQASLRLSAHDAKDMCTTWLSVLTPKIRAFSERLLRATGDTNSLARIRGSLWK 1102 V + + + E ++++ + S + K+ +L+ MVG RY +LIE+AD+I MK T +V + C + H + +S G S D+ + R + ++L+L P +W+A+D ++ L A L L R T L S S +++ R + QF IL G R L ++C+T E+ + + + LED+ P + E LL R G V L + ++ +Q+ +++ +TT+ + +H+IF + + ++ D + PS R+ S +S H + CT WL+ + A +LL + +LA IR +LW+ Sbjct: 9 VRSEMDTSKLFEKFTIDEIREIEHKTRSDIERKKEDLRTMVGERYRDLIEAADTISEMKNTVSKVTQSVNSMQGYCQKLQHTHLIKGVSVGQQ--SSRDIEKKNEEREFFGIATQIKLLLDMPEKIWSAMDDDQYLCATQLFLLARHINTSLQLDSQQSVRINTWFPVLSRQWAA-ISQFKTTILQ-GCRQLLKACDTKEST-ITSCLCSIILLEDSTPRQVFTEFLLARTGA--VQQLFQPDEKSIKSQICEIVQLIITTIYQ----IHSIFYCHSGSHKQDDKLPTNLLMETLNEVMDKNHSNSVIIDTSKSVSLRLLPQSVSNFRPSLRTPPSA-ISDHHLQSSCTEWLNTSVQDVHAGVTKLLVYVTNIKALAGIRDALWE 381
BLAST of mRNA_Ecto-sp13_S_contig1021.232.1 vs. uniprot
Match: A0A2P6MVW1_9EUKA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MVW1_9EUKA) HSP 1 Score: 82.0 bits (201), Expect = 6.860e-12 Identity = 95/445 (21.35%), Postives = 194/445 (43.60%), Query Frame = 2 Query: 125 MSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGEEVLGLLRKFPQACSNVLH-QVPSSLSPGNSDLSGTDVREDAAARHEMEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCRSSWTDLSSTFSTGMDSGVAAFLRGHV-------TYVEQFPRRILSAGTRLLTRSCNTLET-AGALTAILQLQALEDANPLRCLLELLLRRRGGAVVAMLTRATKEENSAQVEQVLHAAVTTVQRTIVDVHAIF---APGRNGSCMLEDLAHPSYRSQASLRLSAHDAKDMCTTWLSVLTPKIRAFSERLLRATGDTNSLARIRGSLWKATHGDGAWATPAAGTRVGGSIRAVEGPMWMEATSFTVNVSAFDGGTNDSTRAWRQDVSSPQLDLWSLLFSQIFAELAEALLKDSLASIRRDVECRLDSILLAITRNE 1423 +SVE+ S + + ++ EL+++VG+RY +LI+SAD+IV M+E +E + + C VL + S L+ + ++R + + +++++ P +W +++N+ LEA+ L LR + + + D+ A + G + + + QFP +IL +G +E + L +IL L ++ L L + L+ R + L +K N + + Q L++ V +Q +I +F A + G+ + E L+ ++ + L+L ++ ++ ++R LL+ L + SL + T G+ V A+E W + TR V ++DLW + F Q+F + +A++++ SI ++ +L S+L ++ ++ Sbjct: 158 LSVEEIRSKEMNMRKETEERRQELRVLVGARYRDLIDSADTIVEMRELSKEAYQKMNRVETGCKKVLGLREDSLLASTTGKMEEKNLRRGNTSTAKK--IKILVDTPEQIWREIENNRYLEASQLYLRAK----ETHQSMEGASDAKTIASIHGSIPLLLHQWSTISQFPPKILESGRAHEKSGTLPVEQHSDTLASILLL----SSSDLPSLCKEFLQSRLSCALDSLKSDSKASNQSGILQQLNSVVYVLQSSIEHTEILFTSDATNKRGAMINESLSKVGHKKE-DLQLDRTTLNELTKAFIDQSCQQVRVGGGELLKKIESAKVLRDMEISLKSNISKEAELKTKTRGS-VSLDSAAIEDSEWDKMC----------------TR-----VCGTKVDLWEVYFRQLFVDRFKAIIREKFHSI--GIQSKLKSVLSHVSEDK 567
BLAST of mRNA_Ecto-sp13_S_contig1021.232.1 vs. uniprot
Match: UPI00085413D7 (conserved oligomeric Golgi complex subunit 1 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI00085413D7) HSP 1 Score: 81.3 bits (199), Expect = 1.240e-11 Identity = 72/272 (26.47%), Postives = 125/272 (45.96%), Query Frame = 2 Query: 95 MVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGEEVLGLLRKFPQACSNVLHQVPSSLSPGNSDLSGTDVREDAAARHEMEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCRSSWTDLSSTFSTGMDSGVAA---FLRGHVTYVEQFPRRILSAGTRLLTRSCNTLETAGALTAILQLQALEDANPLRCLLELLLRRRGGAVVAMLTRATKEENSAQVEQVLHAAVTTVQRTIVDVHAIF--APG 895 M P E S E+ +L + +++ K+ EL+ MVG RY +LIE+AD+I M+ + E+VLG +R C L +++ G S + + AA+ ++L+L P +W+++++++ L A L L C + L ST S V L V F IL LL C ++ A+ + LED++P + L + LL R+ G + + + + ++ + + V + T+ HA+F APG Sbjct: 9 MRDPGALFEAHSAEEIRALERKVRAEIEHKKEELRQMVGERYRDLIEAADTIEEMRRSAEQVLGAVRGLETYCGG-LKAKSAAIHKGKSAVQSQERFYCMAAQ-----IKLLLEIPEKIWSSMEASQYLHATQLYLLCCHLHSLLQLDSSTSRYSPVLQRFPILIRQVAAAGTFRSTILQESKALL--KCPSVSDQAVTEALCSIMLLEDSSPRQALADFLLARKAGIQQLL----NQPHHGSSIKSQVCSLVELLANTLYQAHALFYTAPG 268
BLAST of mRNA_Ecto-sp13_S_contig1021.232.1 vs. uniprot
Match: UPI001AADDB6F (conserved oligomeric Golgi complex subunit 1 isoform X1 n=2 Tax=Rana temporaria TaxID=8407 RepID=UPI001AADDB6F) HSP 1 Score: 80.9 bits (198), Expect = 1.510e-11 Identity = 92/382 (24.08%), Postives = 152/382 (39.79%), Query Frame = 2 Query: 95 MVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGEEVLGLLRKFPQACSNVLHQVPSSLSPGNSDLSGTDVREDAAARHEMEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCRSSWTDLSSTFSTGMDSGVAA---FLRGHVTYVEQFPRRILSAGTRLLTRSCNTLETAGALTAILQLQALEDANPLRCLLELLLRRRGGAVVAMLTRATKEENSAQVEQVLHAAVTTVQRTIVDVHAIF-------APGRNGSCML----------------------EDLAHPSYRS---------QASLRLSAHDA-----KDMCTTWLSVLTPKIRAFSERLLRATGDTNSLARIRGSLWK 1102 M P E S E+ L + +++ K+ EL+ MVG RY +LIE+AD+I M+ + E+VLG +R C L P L D G +E + ++L+L P MW++++S++ L A L L C + L S S V A L V F IL LL C + A+ + LED++P + L + LL R+ G + + + + ++ + + V + T+ HA+F P + +C L E++ S+ Q +LR AH ++ W+S+ I++ LL LA IR ++W+ Sbjct: 9 MRDPGTLFEAHSAEEIRVLEKKVRAEIEHKKEELRQMVGERYRDLIEAADTIGEMRRSAEQVLGAVRGLETYCGG-LRAKPGPLQ---KDRRGAQSQERFSCMASQ--IKLLLEIPEKMWSSMESSRYLHATQLYLLCCHLHSLLQLDSSPSRYSPVLARFPILIRQVAAAGTFRATILQESKSLL--KCPSASDQAVTEALCSIMMLEDSSPRQALADFLLARKAGIQQLL----NQPHHGSSIKSQVCSLVELLANTLYQAHALFYTTPDDVPPNSSLNCGLLFSMLETVTAQQGGGKGIKVLREEMKSVSWSKHLPRSVMDFQPTLRTLAHPINQDYLRETLQQWISMCNEDIKSGISALLVYVTSLKGLAGIRDAVWE 378
BLAST of mRNA_Ecto-sp13_S_contig1021.232.1 vs. uniprot
Match: W4GX23_9STRA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GX23_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.570e-11 Identity = 89/322 (27.64%), Postives = 141/322 (43.79%), Query Frame = 2 Query: 95 MVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGEEVLGLLRKFPQACSNVLHQVPSSLSPGNSDLSGTDVREDAAARHEM---EVVQLMLHAPAAMWAALDSNKVLEAANLV-LRCRSSWTDLSSTFSTGMDSGVAAFLRGHVTYVEQFPRRILSAGTRLLTRSCNTLETAGALTAILQLQALEDANPLRCLLELLLRRRGGAVVAMLTRATKEENSAQVEQVLHAAVTTVQRTIVDVHAIFA-PGRNGSCMLEDL-AHPSYRSQASLRLSAHD-AKDMCTTWLSVLTPKIRAFSE 1039 M+ L +SV A LL T ++ K+ E+Q M GSRY +LI++AD IVSM E + + LR PQ + V +++ S + DAA H ++V L++ A MW A++ LEA ++ L +++D+ G G+ AF + + F RI S + L T T+ A+L L L+ ++ L L+ R A A+ A+ + + A++ V T+ D HA+FA P S L D+ HP L L+ D D TW L +++F + Sbjct: 1 MLDVHAILREVSVVDAQKLLATSRAEKAAKEKEMQAMGGSRYQDLIDAADQIVSMHEASQRLDAALRDMPQLWDTLESSVARTMATTLSSEVSPVISVDAAQSHSHSNGDLVDLVVGASERMWVAMEQGNPLEALSIFKLVDGVTFSDMEG----GPMMGIVAF---ELDAMPSFQHRIQSCAQQCL--RAPTKPTSFYERALLVLLELQHSSTAHALHSAFLQGRSAAAAALRQAASPSHK----QHAVLASLELVLSTLNDAHAMFAVPTSALSTALADIDVHP-------LELACTDWTIDAIRTWRQDLVALLQSFHD 302
BLAST of mRNA_Ecto-sp13_S_contig1021.232.1 vs. uniprot
Match: W4GY15_9STRA (Conserved oligomeric Golgi complex subunit 1 n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GY15_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.900e-11 Identity = 89/322 (27.64%), Postives = 141/322 (43.79%), Query Frame = 2 Query: 95 MVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGEEVLGLLRKFPQACSNVLHQVPSSLSPGNSDLSGTDVREDAAARHEM---EVVQLMLHAPAAMWAALDSNKVLEAANLV-LRCRSSWTDLSSTFSTGMDSGVAAFLRGHVTYVEQFPRRILSAGTRLLTRSCNTLETAGALTAILQLQALEDANPLRCLLELLLRRRGGAVVAMLTRATKEENSAQVEQVLHAAVTTVQRTIVDVHAIFA-PGRNGSCMLEDL-AHPSYRSQASLRLSAHD-AKDMCTTWLSVLTPKIRAFSE 1039 M+ L +SV A LL T ++ K+ E+Q M GSRY +LI++AD IVSM E + + LR PQ + V +++ S + DAA H ++V L++ A MW A++ LEA ++ L +++D+ G G+ AF + + F RI S + L T T+ A+L L L+ ++ L L+ R A A+ A+ + + A++ V T+ D HA+FA P S L D+ HP L L+ D D TW L +++F + Sbjct: 1 MLDVHAILREVSVVDAQKLLATSRAEKAAKEKEMQAMGGSRYQDLIDAADQIVSMHEASQRLDAALRDMPQLWDTLESSVARTMATTLSSEVSPVISVDAAQSHSHSNGDLVDLVVGASERMWVAMEQGNPLEALSIFKLVDGVTFSDMEG----GPMMGIVAF---ELDAMPSFQHRIQSCAQQCL--RAPTKPTSFYERALLVLLELQHSSTAHALHSAFLQGRSAAAAALRQAASPSHK----QHAVLASLELVLSTLNDAHAMFAVPTSALSTALADIDVHP-------LELACTDWTIDAIRTWRQDLVALLQSFHD 302 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1021.232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1021.232.1 >prot_Ecto-sp13_S_contig1021.232.1 ID=prot_Ecto-sp13_S_contig1021.232.1|Name=mRNA_Ecto-sp13_S_contig1021.232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1070bp MYGPSPATVGAMVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGback to top mRNA from alignment at Ecto-sp13_S_contig1021:7841..15050+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1021.232.1 ID=mRNA_Ecto-sp13_S_contig1021.232.1|Name=mRNA_Ecto-sp13_S_contig1021.232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7210bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1021:7841..15050+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1021:7841..15050+ >mRNA_Ecto-sp13_S_contig1021.232.1 ID=mRNA_Ecto-sp13_S_contig1021.232.1|Name=mRNA_Ecto-sp13_S_contig1021.232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3210bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1021:7841..15050+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |