mRNA_Ecto-sp13_S_contig102.220.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: D7G0V4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V4_ECTSI) HSP 1 Score: 2172 bits (5629), Expect = 0.000e+0 Identity = 1302/1806 (72.09%), Postives = 1358/1806 (75.19%), Query Frame = 1 Query: 649 RSQVKELETEVVQSETRSPSKTKAAMAPQPNASGYGSPAATACVASTVPVVIDCFSRDRLRAPAEDVLAKFA----LPDVRSILVHQLVHHGMEHDEASIRLWSTLAPSRLMARGLMVLEKREYGSLLKGLVGRMTDVDEDVVNAAAGALGEMFSAGPATFREGEACLDAVHKQILQHYSARIQRQRSSTTRAKDTIADDEGVPRKKVFAAVADSGPLPEDTPELGASAVGTVLTPATVNSPARTNRACSSFFSPPASESEEEGTNLAQSFPATSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDNDTEDGEELQRPKFEPIVDGVTVAPWANRYRESPGGTSTKGAAKTTGLEPAASPASTSIARRSKKKNSTALGSSGSSSRLVPSSNGSLNASTNTGEAAEKSILKNSISVDSLDTDGSGSRSSGKTAQLHDHHAQHERKHPGLVSSPTRPVLAGPAATEVSVTLGGEEELGSCAAFAEPKLGKARTGQSGEEGGTGAAALGTGGGRDREREDRNDGEATAALKPPSRPDASPTSKAGAVIQHPPDAARSETKDKHSATAERKASVPATVSTPTKTCSSSPHRLGESTTNLSLETATAGPSEAAGQ-HRYSSADKTYTTTTIATANDEDKVMGTVDSSSIFGELLRTLVEVEAAGAGRGAMAGGSGSRSPVHKSPVKIEVATAVDWGVSGRSGARRRNRVSAMENAKTMTSKETILVAGRDGGAMENSESTSTPIPXXXXFSPPTGMMQDVLLVTLRLTDDPDLKIALLALQTMHGFVLAVREHIEPHLGLIIPPLIVKLGDHKVAARHHAMLVLSAVVRVSGLTSAIPRLLLAREGLLSAGWRARESVVKLVIAGLLRWKPSSPSSVGSGALGMSAGRGVAGERLGHGRGTFMGGNGGEGLTEDAYQSGGGRPGRGEGGNAESGYGNDSKRRHLHSPSRSPAVPPRGAHGCGRSGNGGATMMSTADKERLVRDVGSLLADERPEVRRAAVEALAVVASMLGTNDIDVFRVLERGELLRSKESRRLVAARLHDPTSSLPSIGPDGIINFGAGLTTCLSPAHARRGRPVVAAAELSTSLEQEASESRRGHYGRDFNGNDHHSGGIRGGTSALRCWRSNEAGEREEVAPWKPHKVLSDSDRAGPGQEVSDVGSGGQGXXXXMEDNGGGARGGNRAGREGKXXXXXHEAQGYRRTRIASEEEERGGTESDPALSPNNRGGRGGASGSRRSVSSPVLGTNRGRTDGEKWQGGGGDHTYIPSWADRNGDESQVPCENHSYHVEDMPDRIGRGQPSRRKPSPSGLQSEGDPEAESTRGRVGGAXXXXXXXXXXXXXXXXXRGRGPEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXGTDDSDEELWKGGQRNNSRGMGRTIDVGRRTGXXXXXXXXXXXXXXDEYSGRRPVVVDPDLLSTLKRGGSRNAKASRRAVSXXXXXXXXXXXXEXXXXXXXXXXXPASLSHDGXXGRSRSRPKGGSPAEPTTPVPVGRYDDMGRRSHMETTVQQPLPLSLRKRPGGVSGRRGSGGGLGTESFVTGIDVDIQDGGSGSTRHEELAESPLRGPEPEGERRRGFHNQTGVLSATRRWRERREAGERNAENESKLRPGVECDATGRNDGRQATEDRRAGEGSITGGDGHGRGKRGVQRRVRLSSPXXXXXXXXXXXXXPPSPSAALNKPDSFDYLTPEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQV 6051
RSQ +ELETEVVQSET SPSK AAMAPQP+ASG+GS AATACVASTVPVVIDCFSRDRLRAPAEDVLAKFA LPDVRSILVH+LVHHGMEHDEASIRLWSTLAPSRLMARGLMVLEKREYGSLLKGLVGRM DVDEDVV+AAAGAL +M+SAGP T ESPGGTST GAAKT GLEPAA AS S ARRS K++ST LGSSGSSSRLVPSSNGSLN STNTGEA EKSILKNSISVDSLD DG GSRS GKTAQLHDHHAQHERKHP LV+SPTRPVLA PAATEV VTLGGEEE GSCAAFAEPKLGKARTG+SG E GTGAA LGT GGRDRER DRNDGEATAA++PPSRPDASP SKAGA I HPPDA RSE K+KHSATAERKASVPATVSTPTKTCS SP R GEST NLS +TA AGPS A Q HR+SSA KTY+ TT ANDED VM TVDSS I ELLRTLVEVEAA AGRGA GGSGSRSPV K P K E AVDW SG SG RRRNRV AME AKTM SKET+L AG DGGAM++SEST TP X FSPPTGMM+D+L+V LRLTDDPD KIALL+LQT+HGFVLAVREHI+ HL L+IPPLIVKLGDHKVAARHHAMLVLSAVVRVSGL SA PRLLLAREGLLSAGWRARESV KLVIAGLL W+P+SPSSV ALG+SAGRGVAGE+LG GRG FMGGNGGE LTED +QSG RPGRGEGG+A +DSKRRHLHSPS+SPA+P RGAHGCGR NG A +MSTADKE+LVRDVGSLLADERPEVRRAAVEALAV ASM G NDIDV RVLER EL RS ESRR VAARLHD TSSLPS+GPDGI+NFGAGLTT LSPAHARR RPV+AA ELSTS EQEA ESR GH GRD NGNDHHSGGIRGGTSALRCW SNEAGEREEV PWKPH+ +SDSDR G G+E+SDVGSGGQ ME+NGGGARGGNRAGREG+ EAQ YRRTRIAS+EEERGGTESDPALSPNNRGGRGGASG RR VSSPVLGTNRGRTDG K QGGGGDHTYIPSWAD+ GDE QVP EN SY + PDRIGRGQPS RKPSPSG+ SE D EAESTRG VGGA XX GPE S XXXX XXXXXXXXXXXXXXX GTD S+EELWKGGQ +N MGRTIDVGRRTG XXXXXXXXXXX DE SGRRPVVVDPDLLSTLKRGGSRNAKASRRAVSXXXXXXXXX E PASLSHDG GRSRSRPKGG PAEPTTPVPVGRYDDMGRRSHMETTVQQPLPLSLRKR GGVSGRRGSGGGLGTE+FVTGIDVDIQDGGSGS+RH ELAESPL GPEPEGERRRGF+NQTGV SATRR RERREAGERNAENE KLR GVECDATGRNDGR ATEDR AGEGSITGGDG GRGKRG QRRVRLSSP PPSPSAALNKPDSFDYLT EDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHH PLLGSQSHLHALVRDVLGQSENLRSQV
Sbjct: 2 RSQGEELETEVVQSETHSPSKITAAMAPQPSASGHGSHAATACVASTVPVVIDCFSRDRLRAPAEDVLAKFAVEEQLPDVRSILVHKLVHHGMEHDEASIRLWSTLAPSRLMARGLMVLEKREYGSLLKGLVGRMRDVDEDVVDAAAGALRKMYSAGPTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESPGGTSTNGAAKTIGLEPAAPSASISTARRSNKESSTTLGSSGSSSRLVPSSNGSLNTSTNTGEATEKSILKNSISVDSLDIDGRGSRSRGKTAQLHDHHAQHERKHPALVASPTRPVLADPAATEVPVTLGGEEEFGSCAAFAEPKLGKARTGRSGGEDGTGAAVLGTSGGRDRERGDRNDGEATAAVQPPSRPDASPMSKAGATIPHPPDAGRSEAKEKHSATAERKASVPATVSTPTKTCSLSPPRPGESTANLSPKTAMAGPSATAEQCHRHSSAAKTYSATTTVRANDEDNVMSTVDSSPILRELLRTLVEVEAAAAGRGAKTGGSGSRSPVDKPPAKFEGVAAVDWTASGTSGVRRRNRVRAMETAKTMASKETMLAAGGDGGAMQDSESTRTPTLPPXPFSPPTGMMEDILVVMLRLTDDPDFKIALLSLQTIHGFVLAVREHIQTHLDLLIPPLIVKLGDHKVAARHHAMLVLSAVVRVSGLASATPRLLLAREGLLSAGWRARESVAKLVIAGLLFWQPTSPSSVDPDALGLSAGRGVAGEKLGRGRGAFMGGNGGERLTEDEHQSGARRPGRGEGGSAGXXXXDDSKRRHLHSPSQSPAMPLRGAHGCGRRRNGDAALMSTADKEQLVRDVGSLLADERPEVRRAAVEALAVAASMWGANDIDVLRVLERAELFRSNESRRRVAARLHDSTSSLPSVGPDGIVNFGAGLTTHLSPAHARRERPVMAAVELSTSSEQEALESRCGHDGRDVNGNDHHSGGIRGGTSALRCWTSNEAGEREEVTPWKPHQGVSDSDRGGRGKELSDVGSGGQSQGQGMENNGGGARGGNRAGREGEGRHRGREAQSYRRTRIASDEEERGGTESDPALSPNNRGGRGGASGPRRRVSSPVLGTNRGRTDGGKRQGGGGDHTYIPSWADKTGDEPQVPGENRSYDAQHKPDRIGRGQPSIRKPSPSGVDSEDDREAESTRGEVGGAGSGRHAQHGTHERRRXXXXXGPEXGSSXXXXSPEXXXXXXXXXXXXXXXPREGTDGSEEELWKGGQWDNIPRMGRTIDVGRRTGGXXXXXXXXXXXERDECSGRRPVVVDPDLLSTLKRGGSRNAKASRRAVSXXXXXXXXXEALESGAGRRASGGGPASLSHDGGEGRSRSRPKGGEPAEPTTPVPVGRYDDMGRRSHMETTVQQPLPLSLRKRAGGVSGRRGSGGGLGTETFVTGIDVDIQDGGSGSSRHGELAESPLGGPEPEGERRRGFYNQTGVSSATRRRRERREAGERNAENERKLRAGVECDATGRNDGRHATEDRPAGEGSITGGDGRGRGKRGGQRRVRLSSPPTPPLGGGRATVVPPSPSAALNKPDSFDYLTAEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHTPLLGSQSHLHALVRDVLGQSENLRSQV 1600
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: A0A6H5L523_9PHAE (CLASP_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L523_9PHAE) HSP 1 Score: 1980 bits (5129), Expect = 0.000e+0 Identity = 1255/1690 (74.26%), Postives = 1319/1690 (78.05%), Query Frame = 1 Query: 985 MVLEKREYGSLLKGLVGRMTDVDEDVVNAAAGALGEMFSAGPATFREGEACLDAVHKQILQHYSARIQRQRSSTTRAKDTIADDEGVPRKKVFAAVADSGPLPEDTPELGASAVGTVLTPATVNSPARTNRACSSFFSPPASESEEEGTNLAQSFPATSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDNDTEDGEELQRPKFEPIVDGVTVAPWANRYRESPGGTSTKGAAKTTGLEPAASPASTSIARRSKKKNSTALGSSGSSSRLVPSSNGSLNASTNTGEAAEKSILKNSISVDSLDTDGSGSRSSGKTAQLHDHHAQHERKHPGLVSSPTRPVLAGPAATEVSVTLGGEEELGSCAAFAEPKLGKARTGQSGEEGGTGAAALGTGGGRDREREDRNDGEATAALKPPSRPDASPTSKAGAVIQHPPDAARSETKDKHSATAERKASVPATVSTPTKTCSSSPHRLGESTTNLSLETATAGPSEAAGQ-HRYSSADKTYTTTTIATANDEDKVMGTVDSSSIFGELLRTLVEVEAAGAGRGAMAGGSGSRSPVHKSPVKIEVATAVDWGVSGRSGARRRNRVSAMENAKTMTSKETILVAGRDGGAMENSESTSTPIPXXXXFSPPTGMMQDVLLVTLRLTDDPDLKIALLALQTMHGFVLAVREHIEPHLGLIIPPLIVKLGDHKVAARHHAMLVLSAVVRVSGLTSAIPRLLLAREGLLSAGWRARESVVKLVIAGLLRWKPSSPSSVGSGALGMSAGRGVAGERLGHGRGTFMGGNGGEGLTEDAYQSGGGRPGRGEGGNAESGYGNDSKRRHLHSPSRSPAVPPRGAHGCGRSGNGGATMMSTADKERLVRDVGSLLADERPEVRRAAVEALAVVASMLGTNDIDVFRVLERGELLRSKESRRLVAARLHDPTSSLPSIGPDGIINFGAGLTTCLSPAHARRGRPVVAAAELSTSLEQEASESRRGHYGRDFNGNDHHSGGIRGGTSALRCWRSNEAGEREEVAPWKPHKVLSDSDRAGPGQEVSDVGSGGQGXXXXMEDNGGGARGGNRAGREGKXXXXXHEAQGYRRTRIASEEEERGGTESDPALSPNNRGGRGGASGSRRSVSSPVLGTNRGRTDGEKWQGGGGDHTYIPSWADRNGDESQVPCENHSYHVEDMPDRIGRGQPSRRKPSPSGLQSEGDPEAESTRGRVGGAXXXXXXXXXXXXXXXXXRGRGPEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXGTDDSDEELWKGGQRNNSRGMGRTIDVGRRTGXXXXXXXXXXXXXXDEYSGRRPVVVDPDLLSTLKRGGSRNAKASRRAVSXXXXXXXXXXXXEXXXXXXXXXXXPASLSHDGXXGRSRSRPKGGSPAEPTTPVPVGRYDDMGRRSHMETTVQQPLPLSLRKRPGGVSGRRGSGGGLGTESFVTGIDVDIQDGGSGSTRHEELAESPLRGPEPEGERRRGFHNQTGVLSATRRWRERREAGERNAENESKLRPGVECDATGRNDGRQATEDRRAGEGSITGGDGHGRGKRGVQRRVRLSSPXXXXXXXXXXXXXPPSPSAALNKPDSFDYLTPEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQV 6051
MVL+KREYGSLLKGLVGRM DVDEDVVNAAAGALG+MFSAGPAT DT ADDEG+P KK F AVAD G LPEDTPEL ASAVGTVLT TVNSP RTNRACSSFFSP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TGDN TEDGE LQRP FEPIVDGVTVA WA+R RESPGGTST GAAKT GL+PAA PA GSSSRLVPSS+GSLN STNT E EKSILKNSISVDSLD D SGSRSSGKTAQLH+HHAQHERKH GLVSSPTRPVLAGPAATEVSVTLGGEEE G CAA AEPKLGKA +SG E GTGA ALG GGG DRER DRNDGEATAA+KPP RPD+SP SKAGA IQHPPD+ R E K+KHSATAER+A V AT+STPTKTCS SP R G+ST NLS ++A AGP A Q HR+SSA KTY+TTT ANDED MG VDSS I ELLRTLVEVEAA AGRGA AGGSGSRS VH SP K E AVDW SG SG +RRNRV AME A TMTSKET+L AGRDGGAM++S+ST TP FSPPTGM++D+L+V LRLTDDPD KIALLALQTMHGFVL VREHI+PHL LIIPPLIVKLG HKVA RHHAMLVLSAVVRVSGL S PRLLLAREGLLSAGWRA E V KLVIAGLL WKPSSPSSVGS ALG+SAGRGV GERLGHGRGTFMGGNGGEGLTED +QSGG RPGRGEGG+A SG DSKRRHLHSPSRSPA+PP GAHG GR NGGA MMST DKE+LVRDVGSLLADERPEVRRAAVEALAV A+M GTNDIDVFRVLER +LLRS ESRRLVAARLHDPTSSLPSIGPDGI+NFGAGLTT LSPAHARRGRPVVAAAELSTSLEQEASESR G+ GRD NG DHHSGGIRGGT ALRCWRSNEAGEREEVAPW+P + +S SDR G G+EV +VGSGGQG MEDNGG ARGGNR GREG XXXXX GY+RTR ASEEE RGGT SDP LSPNNRGGRGGASG RR VSSPVLGTN GRTDGEKWQGGGGDHTYIPSWADR GDE QVP EN SYH E+MPDRIGRGQPSR KPSPSGL +E D EAE TRGRV GA RGRGPEG S GTD SD+ELWKGGQ +NSRGMG TIDVGR XXXXXXXXXXXXX D+YSGRRPVVVDPDLLSTLKRGGSRNAKA+RRAVS XXXXXXXXXXX XXXXXXXXXXXPASLSHDG X +SRSR KGG+PAEPTTPVPVGR + + V + +L+ P S GIDVDI+DGGSGS+RH ELA+SPLR PEPEGERRRGFHNQ NESK+R V+CDATGRNDG QATEDRRAGEGSITGGDG GRGKRGVQRRVRLSSP XXXXX PPSPSAAL KPDSFDYLT EDIRPSPNPSQE+QRAMASLPRDGWPEIFHTLNSVRRLATHH+PLLGSQSHLHALVRDVLGQSENLRSQV
Sbjct: 1 MVLDKREYGSLLKGLVGRMRDVDEDVVNAAAGALGKMFSAGPAT----------------------------------DTTADDEGLPGKKGFVAVADEGSLPEDTPELAASAVGTVLTAGTVNSPGRTNRACSSFFSP-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVETGDNGTEDGEGLQRPTFEPIVDGVTVASWADRDRESPGGTSTSGAAKTIGLQPAAPPAXXXXXXXXXXXXXXXXXXXGSSSRLVPSSHGSLNTSTNTRETTEKSILKNSISVDSLDVDDSGSRSSGKTAQLHNHHAQHERKHSGLVSSPTRPVLAGPAATEVSVTLGGEEEFGCCAAAAEPKLGKAGMERSGGEDGTGAVALGAGGGCDRERGDRNDGEATAAVKPPPRPDSSPLSKAGAAIQHPPDSGRPEAKEKHSATAEREAFVSATLSTPTKTCSLSPPRPGKSTANLSPKSAIAGPLATARQGHRHSSAAKTYSTTTTVRANDEDNAMGAVDSSPILVELLRTLVEVEAAAAGRGAKAGGSGSRSSVHTSPAKFEGVAAVDWTASGTSGVQRRNRVRAMETAITMTSKETMLAAGRDGGAMQDSDSTRTPTLPPPPFSPPTGMVEDILVVMLRLTDDPDFKIALLALQTMHGFVLVVREHIKPHLDLIIPPLIVKLGHHKVATRHHAMLVLSAVVRVSGLASDTPRLLLAREGLLSAGWRASEGVAKLVIAGLLCWKPSSPSSVGSDALGVSAGRGVNGERLGHGRGTFMGGNGGEGLTEDKHQSGGRRPGRGEGGSAGSGNSKDSKRRHLHSPSRSPAMPPSGAHGYGRRENGGAAMMSTLDKEQLVRDVGSLLADERPEVRRAAVEALAVAANMWGTNDIDVFRVLERADLLRSTESRRLVAARLHDPTSSLPSIGPDGIVNFGAGLTTRLSPAHARRGRPVVAAAELSTSLEQEASESRCGNDGRDVNGYDHHSGGIRGGTFALRCWRSNEAGEREEVAPWRPLQGVSGSDRRGRGKEVRNVGSGGQGQNQGMEDNGGEARGGNRVGREGXXXXXXXXXXGYQRTRTASEEE-RGGTGSDPDLSPNNRGGRGGASGPRRRVSSPVLGTNSGRTDGEKWQGGGGDHTYIPSWADRTGDEPQVPGENRSYHAENMPDRIGRGQPSRWKPSPSGLHTEDDREAERTRGRVDGAGGGRHAQHGTRERRRERRGRGPEGGSSGPGAKPEWQHQNHNRGHRRRGSPREGTDGSDQELWKGGQWDNSRGMGHTIDVGRXXXXXXXXXXXXXXXXRDQYSGRRPVVVDPDLLSTLKRGGSRNAKANRRAVSAXXXXXXXXXXXXXXXXXXXXXXXPASLSHDGGXXQSRSRSKGGAPAEPTTPVPVGRGMQLLDNLFKPSLVVRKRQAALQYNPINAS--------------PPGIDVDIKDGGSGSSRHGELAKSPLRDPEPEGERRRGFHNQ----------------------NESKIRASVDCDATGRNDGHQATEDRRAGEGSITGGDGRGRGKRGVQRRVRLSSPPTPXXXXXRATVVPPSPSAALIKPDSFDYLTAEDIRPSPNPSQEMQRAMASLPRDGWPEIFHTLNSVRRLATHHSPLLGSQSHLHALVRDVLGQSENLRSQV 1606
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: A0A6H5L3P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P3_9PHAE) HSP 1 Score: 156 bits (395), Expect = 5.600e-41 Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 1 Query: 589 QVALECLSVLKDSVSWLCQTRSQVKELETEVVQSETRSPSKTKAAMAPQPNASGYGSPAATACVASTVPVVIDCFSRDRLRAPAEDVLAKFALPD 873
QVALECLSVLKDSVSWLCQTRSQV ELETEVVQS T SPSKTKAAMAPQPNASG+GS AATACVASTVPVVIDCFSRDRLRAPAEDVLAKFA+ +
Sbjct: 2 QVALECLSVLKDSVSWLCQTRSQV-ELETEVVQSGTHSPSKTKAAMAPQPNASGHGSHAATACVASTVPVVIDCFSRDRLRAPAEDVLAKFAVEE 95
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: A0A7S3YBP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YBP5_HETAK) HSP 1 Score: 97.1 bits (240), Expect = 3.690e-18 Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 5842 EDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQV 6051
+DIRPSPNPS ELQR + +LP WPE+FHTLN+VRRL HH LL + HLH +VRDVL QSENLRS V
Sbjct: 14 DDIRPSPNPSHELQRTLRALPNGEWPEVFHTLNAVRRLGLHHGALL--EPHLHGVVRDVLKQSENLRSAV 81
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: A0A835ZHW3_9STRA (TOG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW3_9STRA) HSP 1 Score: 102 bits (254), Expect = 8.510e-18 Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 1 Query: 5791 SPSAALNKPDSFDYLTPEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQ 6048
+P AAL PD+FDYL +D+RPSPN EL RA+ASL RD WPEIFHTLN+ RRLA HHAPL+ ++H L RDVL +NLRSQ
Sbjct: 1234 TPGAALC-PDAFDYLGWDDLRPSPNAKAELARALASLARDDWPEIFHTLNAARRLARHHAPLV--EAHARELTRDVLRHVDNLRSQ 1316
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: A0A4D9CTV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTV7_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 8.590e-7 Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 5785 PPSPSAALNKPDSFDYLTPEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQS--HLHALVRDVLGQSENLRSQV 6051
P PS+A + YLT +RP P+P+Q L + SLP WPE FH+L ++RRLA HH +L + S L L+ ++ +NLRS V
Sbjct: 460 PVGPSSAPTHTPTIQYLTIAQLRPLPDPNQSLTHLVTSLPTADWPENFHSLTTIRRLALHHPDILFALSPPSLRLLLVELFRLIDNLRSAV 550 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig102.220.1 >prot_Ecto-sp13_S_contig102.220.1 ID=prot_Ecto-sp13_S_contig102.220.1|Name=mRNA_Ecto-sp13_S_contig102.220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=2017bp MSATSAATAASGHGGSRMSNNDSNTYSSGGVQENREREPSGTMQLLDRLGback to top mRNA from alignment at Ecto-sp13_S_contig102:11..13083- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig102.220.1 ID=mRNA_Ecto-sp13_S_contig102.220.1|Name=mRNA_Ecto-sp13_S_contig102.220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=13073bp|location=Sequence derived from alignment at Ecto-sp13_S_contig102:11..13083- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig102:11..13083- >mRNA_Ecto-sp13_S_contig102.220.1 ID=mRNA_Ecto-sp13_S_contig102.220.1|Name=mRNA_Ecto-sp13_S_contig102.220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=6051bp|location=Sequence derived from alignment at Ecto-sp13_S_contig102:11..13083- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |