mRNA_Ecto-sp13_S_contig10195.215.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10195.215.1 vs. uniprot
Match: D7G7A1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A1_ECTSI) HSP 1 Score: 1493 bits (3865), Expect = 0.000e+0 Identity = 795/919 (86.51%), Postives = 824/919 (89.66%), Query Frame = 1 Query: 1 KQEVTAVAVHPHYDIVASGQAGREAIVCLFDATRRRTGAGGXXXXXXXXXXXXXXXXXAEAAEPSEAATAVASPVFLREISLGKRKTRGVAALDFSPCGDLILAMAGGEGQSLSVWDWRRGERLAAARAESVHLPASSVRFNPWLFLQGTSAVTAGLGPVGAACYTLVSCGERHVRFWALTREWCPRRGXXXXXXX----VTVGGETYEDEMGGNERIDDGRGAEESEHGDGGGWRWSLSSRPGNFGVRGELGTMTCMSFIGEPRAGKEERQRRKRQATGGAEDGRLPLPMARAITGSENGQIYFWEISEAGQGKRLNKHQASPSHHHPRTFSPNRSGGGGGRTARQPVGWRPGGRLLAVVPKAHDGAITDVSYLPHGEDGRPTPAAGVVEAEAARVRFGGGAEEGEGSSGGQEWGRLATCGGKGTLRLWSVAGEGPSPLQLLLTISVSNRGVGVGYPRSVSWDRSGTTLALGTVGNAVALVQPGEGTGTTPDRTMRATGSVMFMLAVQGHTDSCKALAPHPTRLWFITGGTDGVLRLWDARSRRQLSAARLVGKVCSAAFHPAGELVAVGSEAGDFLLMALRLPPRQSSTARHEDPNRRQDASAAEERDETTLGFSWDVLARKRTIGGGGXXASGRAPGRTTNSNSIDKRVTPVTKQGGFHRDGGATNVPVPANATFGGGEGDLAERVGGGAARNGGXXXEGLGADHRHRQPGPEKFAPRPDNAEYDGFAGASLSPPRPAKGNRDGLPSPQCRGSYAAMGASAXXXXXXXXAGKAMISVSALRFSPDGGVLAAACGMSIFLYCEATTAAPAAEDRAGAGTAREAAMAPDRDGRVAGDGDRNSRRSDGTGGVKGSYHRYAVCTGHVSKVRSFDFSRDGSVLQSNDAFGELLFWEASSGKQISNSFSVRDVEMDSWSCPE 2745 +Q+VTAVAVHPH+DIVASGQAGREAIVCLFDATRR XXXXXXXXXXX A A + S AATAVA+PVFLRE+SLGKRKTRGVAALDFSPCGDLILAMAGGEGQSLS+WDWRRGERLAAARAESVH PASSVRFNPWLFLQG SAV AGLGP GAACYTLVSCG++HVRFWALTREWCPRRG XXXXXX V VGGETYED M G R+ DGR AEE EHG+GGGW+WSLSSRPGNFGVRGELGTMTCM+FIGEPRAGKEERQRRKRQATGG EDGRLPLPMARAITGSENGQIYFWEISEAGQGKR NKHQ SPSHHHP TFSPNRSG GRTA +PVGW+PGGRLLAVVPKAHDGAITDVSYLPHGEDGR PA GVVEAEAARVRFGG GQEWGRLATCGGKGTLRLWSVAGEGPSPLQLLLTIS+SNRGVGVGYPRSVSWDRSGTTLALGTVGNAVALVQPGEGTGT PD+ MRATGSVMFMLAVQGHTDSCKALAPHPTR WFITGGTDGVLRLWDARSRRQLSAARLVGKVCSAAFHPAGELVAVGSEAGDFLLMALRLPPR+SST RHEDPNRRQ+ASA EERDE LGFSWDVLARKR IGGGG +GRAP +NSNSIDKR TPVTKQG FHRDGGATNVPVPA+ATFGGGEG LAE VGG AARNGGXXXEG+GADHRHRQPGP KFAPRPDN EYDG AG SLSPPRPAKGN+DGLPSP C GSYAAMGASA AGKAMISVSALRFSPDGGVLAAACGMSIFLY EAT AAPAAE+ AGAGTAREAAMAPDR+GRVA GDRN RRSDGTGGVKGSYHRYAVCTGHVSKV+SFDFSRDGSVLQSNDA GELLFW+ASSGKQIS+ FSVRDVEMDSWSCPE Sbjct: 670 EQQVTAVAVHPHHDIVASGQAGREAIVCLFDATRRXXXXX-XXXXXXXXXXXSSDARTAGAVQSSGAATAVAAPVFLRELSLGKRKTRGVAALDFSPCGDLILAMAGGEGQSLSIWDWRRGERLAAARAESVHQPASSVRFNPWLFLQGNSAVAAGLGPAGAACYTLVSCGKKHVRFWALTREWCPRRGGXXXXXXXXXXVGVGGETYEDGMRGGGRVGDGRAAEEGEHGEGGGWKWSLSSRPGNFGVRGELGTMTCMAFIGEPRAGKEERQRRKRQATGGVEDGRLPLPMARAITGSENGQIYFWEISEAGQGKRHNKHQTSPSHHHPTTFSPNRSGXXXGRTAHEPVGWQPGGRLLAVVPKAHDGAITDVSYLPHGEDGRTPPAEGVVEAEAARVRFGGXXXXXXXXXXGQEWGRLATCGGKGTLRLWSVAGEGPSPLQLLLTISISNRGVGVGYPRSVSWDRSGTTLALGTVGNAVALVQPGEGTGTRPDQKMRATGSVMFMLAVQGHTDSCKALAPHPTRPWFITGGTDGVLRLWDARSRRQLSAARLVGKVCSAAFHPAGELVAVGSEAGDFLLMALRLPPRRSSTTRHEDPNRRQNASAEEERDEMALGFSWDVLARKRVIGGGGGGPNGRAPSSISNSNSIDKRATPVTKQGSFHRDGGATNVPVPASATFGGGEGGLAETVGGEAARNGGXXXEGVGADHRHRQPGPVKFAPRPDNDEYDGIAGTSLSPPRPAKGNKDGLPSPHCCGSYAAMGASAAAAAT---AGKAMISVSALRFSPDGGVLAAACGMSIFLYSEATAAAPAAENGAGAGTAREAAMAPDREGRVASGGDRNGRRSDGTGGVKGSYHRYAVCTGHVSKVKSFDFSRDGSVLQSNDASGELLFWKASSGKQISHGFSVRDVEMDSWSCPE 1584
BLAST of mRNA_Ecto-sp13_S_contig10195.215.1 vs. uniprot
Match: A0A6H5K9M8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M8_9PHAE) HSP 1 Score: 770 bits (1989), Expect = 4.000e-258 Identity = 424/513 (82.65%), Postives = 435/513 (84.80%), Query Frame = 1 Query: 4 QEVTAVAVHPHYDIVASGQAGREAIVCLFDATRRRTGAGGXXXXXXXXXXXXXXXXXAEAAEPSEAATAVASPVFLREISLGKRKTRGVAALDFSPCGDLILAMAGGEGQSLSVWDWRRGERLAAARAESVHLPASSVRFNPWLFLQGTSAVTAGLGPVGAACYTLVSCGERHVRFWALTREWCPRRGXXXXXXXVTVGGETYEDEMGGNERIDDGRGAEESEHGDGGGWRWSLSSRPGNFGVRGELGTMTCMSFIGEPRAGKEERQRRKRQATGGAEDGRLPLPMARAITGSENGQ-----------------------IYFWEISEAGQGKRLNKHQASPSHHHPRTFSPNRSGGGGGRTARQPVGWRPGGRLLAVVPKAHDGAITDVSYLPHGEDGRPTPAAGVVEAEAARVRFGGGAEEGEGSSGGQEWGRLATCGGKGTLRLWS--------VAGEGPSPLQLLLTISVSNRGVGVGYPRSVSWDRSGTTLALGTVGNAVALVQPGEG 1449 +EVTAVAVHPH+DIVASGQAGREAIVCLFDAT+RR+GAGGXXXXXXXXXXXXXX AEAAEPSE ATAV +PVFLREISLGKRK RGVAALDFSPCGDLILAMAGGEGQSLSVWDWRRGERLAAARAESVHLPASSVRFNPWLFLQGTSAV AGL P GAACYTLVSCGERHVRFWALTREWCPRR XXXXXV VGGETYED MGGN+R DDGR AEE EHGDGGGW+WSLSSRPGNFGVRGELGTMTCM+FIGEPRAGKEERQRRKRQATGGAEDGRLPLPMARAITGSENGQ IYFWEISEA QGKR NKHQ PSHHHP T SPNRS GGG +TA +PVGW+PGGRLLAVVPK HDGAITDVSYLPHGEDGRP PAA V E SSGGQEWGRLATCGGKGTLRLWS VAGEGPSPLQLLLTISVSNRGVGVGYPRSVSWDRSGTTLALGTVGNAVALVQPGEG Sbjct: 878 KEVTAVAVHPHHDIVASGQAGREAIVCLFDATQRRSGAGGXXXXXXXXXXXXXXRTAAEAAEPSEGATAVPAPVFLREISLGKRKARGVAALDFSPCGDLILAMAGGEGQSLSVWDWRRGERLAAARAESVHLPASSVRFNPWLFLQGTSAVAAGLDPAGAACYTLVSCGERHVRFWALTREWCPRRRGGXXXXXVGVGGETYEDGMGGNKRTDDGRAAEEGEHGDGGGWKWSLSSRPGNFGVRGELGTMTCMAFIGEPRAGKEERQRRKRQATGGAEDGRLPLPMARAITGSENGQSPFITDGMTERPPLPAVTLRRPQIYFWEISEARQGKRHNKHQTLPSHHHPTTVSPNRSDGGGEKTAHEPVGWQPGGRLLAVVPKVHDGAITDVSYLPHGEDGRPPPAAVVAEXXXXXXXXXXXXXXXXXSSGGQEWGRLATCGGKGTLRLWSELEVGRAGVAGEGPSPLQLLLTISVSNRGVGVGYPRSVSWDRSGTTLALGTVGNAVALVQPGEG 1390
BLAST of mRNA_Ecto-sp13_S_contig10195.215.1 vs. uniprot
Match: A0A6H5K4L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4L8_9PHAE) HSP 1 Score: 634 bits (1634), Expect = 3.880e-217 Identity = 337/391 (86.19%), Postives = 348/391 (89.00%), Query Frame = 1 Query: 1516 GHTDSCKALAPHPTRLWFITGGTDGVLRLWDARSRRQLSAARLVGKVCSAAFHPAGELVAVGSEAGDFLLMALRLPPRQSSTARHEDPNRRQDASAAEERDETTLGFSWDVLARKRTIGGGGXXASGRAPGRTTNSNSIDKRVTPVTKQGGFHRDGGATNVPVPANATFGGGEGDLAERVGGGAARNGGXXXEGLGADHRHRQPGPEKFAPRPDNAEYDGFAGASLSPPRPAKGNRDGLPSPQCRGSYAAMGASAXXXXXXXXAGKAMISVSALRFSPDGGVLAAACGMSIFLYCEATTAAPAAEDRAGAGTAREAAMAPDRDGRVAGDGDRNSRRSDGTGGVKGSYHRYAVCTGHVSKVRSFDFSRDGSVLQSNDAFGELLFWEASSGKQ 2688 GH+DSCKALAPHPTR WFITGGTDGVLRLWDARSRRQLSAA+LVGKVCSAAFHPAGELVAVGSEAGDFLLMALRLPPRQSSTARHEDPNRRQDASA EERDETTLGFSWDVLARKR IG XX S RAPGRT+NSNSID+R TPV +QG FHRDGGATNVPVPANATF GGE DLAE VGGGAA XX EG GAD+RHRQPGP FAP+PDN E G AGASLSPPRPAKGN+D LPSPQCRGSYAAMGASA AGKAMISVSALRFSPDGGVLAAACGMSIFLYCEAT AAPA +D AGAGTAREAAMAPDRDGRVAGDG RN RR+DGT G+K SYHRYAVCTGHVSKVRSFDFSRDGSVLQSNDA GELLFWEASSGKQ Sbjct: 2 GHSDSCKALAPHPTRPWFITGGTDGVLRLWDARSRRQLSAAKLVGKVCSAAFHPAGELVAVGSEAGDFLLMALRLPPRQSSTARHEDPNRRQDASAIEERDETTLGFSWDVLARKRIIGXXXXXXSSRAPGRTSNSNSIDRRATPVAEQGSFHRDGGATNVPVPANATFAGGEEDLAEGVGGGAAHXXXXXGEGFGADYRHRQPGPVNFAPKPDNDENGGIAGASLSPPRPAKGNKDRLPSPQCRGSYAAMGASAAAAAT---AGKAMISVSALRFSPDGGVLAAACGMSIFLYCEATAAAPAVKDGAGAGTAREAAMAPDRDGRVAGDGCRNGRRNDGTSGMKASYHRYAVCTGHVSKVRSFDFSRDGSVLQSNDASGELLFWEASSGKQ 389
BLAST of mRNA_Ecto-sp13_S_contig10195.215.1 vs. uniprot
Match: A0A7S1XVQ1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVQ1_9STRA) HSP 1 Score: 190 bits (483), Expect = 7.480e-46 Identity = 192/598 (32.11%), Postives = 268/598 (44.82%), Query Frame = 1 Query: 7 EVTAVAVHPHYDIVASGQAGREAIVCLFDATRRRTGAGGXXXXXXXXXXXXXXXXXAEAAEPSEAATAVASPVFLREISLGKRKTRGVAALDFSPCGDLILAMAGGEGQSLSVWDWRRGERLAAARAESVHLPASSVRFNPWLFLQGTSAVTAGLGPVGAACYTLVSCGERHVRFWALTREWCPRRGXXXXXXXVTVGGETYEDEMGGN-ERIDDGRGAEE-------------SEHGDGGGWRWSLSSRPGNFGVRGELGTMTCMSFIGEPRAGKEERQRRKRQATGGAEDGRLPLPMARAITGSENGQIYFWEISEAGQGKRLNKHQASPSHHHPRTFSPNRSGGGGGRTARQPVGWRPGGRLLAVVPKAHDGAITDVSYLPHGEDGRPTPAAGVVEAEAARVRFGGGAEEGEGSSGGQEWGRLATCGGKGTLRLWSVAGEGPS----PLQLLLTISVSNRGVGVGYPRSVSWDRSGTTLALGTVGNAVAL--VQPGEGTGTTPDRTM-RATGSVMFM---LAVQGHTDSCKALAPHPTRLWFITGGTDGVLRLWDARSRRQLSAARLVGKVCSAAFHPAGELVAVGSEAGDFLLM 1728 +VT+VAVHP DIVASGQ R A VC+FD + XXXXXXXX T + L +++LGK +RGVA+LDFSP G L+LA++ + S+SV DWR G L AR+ + + +V +NP+ FL A + CY++VSCG RH++ W LTR R + G Y + N E RG E+ E G WR L + G++G R E+ +TC++F + +A A D P +R + G+ +G + W + G TA Q W+P G+ LA VP H G ITD++ + H D + T +AT G + +W++ G P+Q L S GVGVG PR++S D +G+ L +GT GNA+ L VQ PDR + A S+ M L +QGH SC+ +A HP F++ G D +R+WDA SRR LS ARL K + AF P GE +AVG+E GD ++M Sbjct: 733 DVTSVAVHPKLDIVASGQDARVARVCVFDVSSADATQVAQYNDGQRQPXXXXXXXXXXXXXXXXV-TGASGLRMLAQMTLGKN-SRGVASLDFSPDGHLLLAVSNDDYHSVSVHDWRHGTILCTARSNNAAV--HNVAWNPFCFLGVDEADYSD-----DICYSIVSCGVRHIKLWTLTR----REEFEPPALPAMMKGVCYGNIYAKNCEYGKYNRGLEDVPPPSFLHTHSRTREMLQTGSWR--LDGKQGSYG-RFEIEDITCVAFTCD-------------RAKDYAND---VSPESRILAGTGSGDLMVWMQATDG-------------------------------TAGQ---WQPRGKALASVPGIHVGPITDITLVYH--DDKCT---------------------------------VATAAKDGRIVVWALGPPGGKRSDLPIQPLRVAYASASGVGVGPPRALSLDATGSVLIVGTAGNALCLFDVQSQPTAPQEPDRAIIPADASIPGMQSHLLLQGHNSSCRQIAAHPQMRRFVSCGGDRTVRMWDADSRRLLSTARLGDKTMAVAFSPGGEHIAVGTEKGDIVVM 1229
BLAST of mRNA_Ecto-sp13_S_contig10195.215.1 vs. uniprot
Match: A0A835YP67_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP67_9STRA) HSP 1 Score: 127 bits (319), Expect = 4.840e-26 Identity = 190/697 (27.26%), Postives = 258/697 (37.02%), Query Frame = 1 Query: 7 EVTAVAVHPHYDIVASGQAGREAIVC-LFDATRRRTGAGGXXXXXXXXXXXXXXXXXAEAAEPSEAATAVASPVFLREISLGK-RKTRGVAALDFSPCGDLILAMAGGEGQSLSVWDWRRGERLA-AARAESVHLPASSVRFNPWLFLQGTSAVTAG--------------LGPVGAACYTLVSCGERHVRFWALTREWCPRRGXXXXXXXVTVGGETYEDEMG--GNERIDDGRGAEES---EHGDGGGWR--------------------------------------------WSLSSRPGNFGVRGELGTMTCMSFIG-EPRAGKEERQR----------------------------------------RKRQATG------GAEDGRLPLPMARAITGSENGQIYFWEISEAGQGKRLNKHQASPSHHHPRTFSPNRSGGGGGRTARQPVGWRPGGRLLAVVPKAHDGAITDVSYLPHGEDGRPTPAAGVVEAEAARVRFGGGAEEGEGSSGGQEWGRLATCGGKGTLRLWSVAGEGPS---PLQLLLTISVSNRGVGVGYPRSVSWDRSGTTLALGTVGNAVALVQPGEGTGTTPDRTMRATGSVMFMLAVQGHTDSCKALA--PHPTRLWFITGGTDGVLRLWDARSRRQLSA--ARLVGKVCSAAFHPAGELVAVGSEAGDFLLMALR 1737 EVTA+AVH +VAS Q +A ++DA XXXXXXXXXX A + AA +A E+ G +G+A LDFSPCG L+LA+ E Q L +WDWRRG +L AARA LP + VRF+P L+ + G P G A + L+S GERHVRFW L R V +G G R + G A + +H + R W L G FG + T+TC++F+ P+ + AT DG + P++ A S+ G F + Q L+ SPS H A GW GR+ V AH GA+TD+ L +P AA LAT G GTL+LW + + L+ LL I V+ RGV +G+PRS+SWD SGTT+A+GT GNA+ LVQP G+ + G +DS + H + G R D L A+L + CS AFHP+G ++AVG+ GD +++ L+ Sbjct: 724 EVTAIAVHAPSALVASAQCQHDAAYAFVYDAAXXXX-----------XXXXXXXXXXXGAPDTDGAAAPIA------ELLAGSGTAVKGIAGLDFSPCGRLLLALVLAECQMLHIWDWRRGTQLIDAARACPGRLPVACVRFHPHLWASPSGGPNGGSXXXXXXXXXXXXXXXPPGEARFCLISAGERHVRFWTLERRAREAPSTDVKFLSADVKSHAVSSRIGKGGRARKEQGGKAGQRARVQHIEAAAERKETVLAVAAIGGVASDSRAAPKLISSLPKRAQKRQPPSPTARAEWHLDGGAGRFGSGAK--TVTCVAFVRLRPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEQLSATAXXXXXXAPPDGPVSPPLSPAA--SDAGSNGFGSGAVHFQTAALSN--VSPSRH---------------AKAAARGGWLAQGRVTHCVSGAHAGAVTDLCVL------QPDDAAAAAALSTGAAT-------------------LATAGADGTLKLWKLVCDVVKLDLVLEPLLAIEVAARGVALGHPRSLSWDDSGTTIAVGTAGNAICLVQP----------PTDMAGNSCDPADMAGVSDSDRGAQRDAHASNASSSASLGGGGARSGDVMFMLALGGHTAKLPDQGCSLAFHPSGNVLAVGTRTGDLIVLGLQ 1347
BLAST of mRNA_Ecto-sp13_S_contig10195.215.1 vs. uniprot
Match: W2RFU3_PHYPN (SH3 domain-containing protein n=18 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RFU3_PHYPN) HSP 1 Score: 74.7 bits (182), Expect = 7.490e-10 Identity = 57/185 (30.81%), Postives = 80/185 (43.24%), Query Frame = 1 Query: 7 EVTAVAVHPHYDIVASGQAGREAIVCLFDATRRRTGAGGXXXXXXXXXXXXXXXXXAEAAEPSEAATAVASPVFLREISLGKRKTRGVAALDFSPCGDLILAMAGGEGQSLSVWDWRRGERLAAARAESVHLPASSVRFNPWLFLQGTSAVTAGLGPVGA-----ACYTLVSCGERHVRFWALTR 546 EVT+VA+HP+ IVASGQAGR A V +++A G + + K V ++ FS G L+ ++ G ++ + DW+ E L +AR + + A V FNP+ G P A ACYTLVSCG RH+RFW LT+ Sbjct: 276 EVTSVAIHPNQRIVASGQAGRSAFVLVWNANDEPLG---------------------------------------KRFACLKGHQVTVRSISFSHDGKLLASLGGDMYNTICIHDWKAQELLVSARGHTFRVHA--VAFNPFQ-AYGRPEANRSKKPGQALHDDDACYTLVSCGVRHIRFWTLTK 418
BLAST of mRNA_Ecto-sp13_S_contig10195.215.1 vs. uniprot
Match: A0A0W8CHN8_PHYNI (ATP-dependent RNA helicase DDX20 n=3 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CHN8_PHYNI) HSP 1 Score: 74.7 bits (182), Expect = 8.030e-10 Identity = 57/185 (30.81%), Postives = 80/185 (43.24%), Query Frame = 1 Query: 7 EVTAVAVHPHYDIVASGQAGREAIVCLFDATRRRTGAGGXXXXXXXXXXXXXXXXXAEAAEPSEAATAVASPVFLREISLGKRKTRGVAALDFSPCGDLILAMAGGEGQSLSVWDWRRGERLAAARAESVHLPASSVRFNPWLFLQGTSAVTAGLGPVGA-----ACYTLVSCGERHVRFWALTR 546 EVT+VA+HP+ IVASGQAGR A V +++A G + + K V ++ FS G L+ ++ G ++ + DW+ E L +AR + + A V FNP+ G P A ACYTLVSCG RH+RFW LT+ Sbjct: 110 EVTSVAIHPNQRIVASGQAGRSAFVLVWNANDEPLG---------------------------------------KRFACLKGHQVTVRSISFSHDGKLLASLGGDMYNTICIHDWKAQELLVSARGHTFRVHA--VAFNPFQ-AYGRPEANRSKKPGQALHDDDACYTLVSCGVRHIRFWTLTK 252
BLAST of mRNA_Ecto-sp13_S_contig10195.215.1 vs. uniprot
Match: A0A329RWQ1_9STRA (SH3 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RWQ1_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.840e-9 Identity = 57/185 (30.81%), Postives = 81/185 (43.78%), Query Frame = 1 Query: 7 EVTAVAVHPHYDIVASGQAGREAIVCLFDATRRRTGAGGXXXXXXXXXXXXXXXXXAEAAEPSEAATAVASPVFLREISLGKRKTRGVAALDFSPCGDLILAMAGGEGQSLSVWDWRRGERLAAARAESVHLPASSVRFNPWLFLQGTSAVTAGLGPVGA-----ACYTLVSCGERHVRFWALTR 546 EVT+VAVHP+ IVASGQAGR A + +++A + G + + K V ++ FS G L+ ++ G ++ + DW+ E L +AR + + A V FNP+ G P A ACYTLVSCG RH+RFW LT+ Sbjct: 280 EVTSVAVHPNQRIVASGQAGRSAFLLVWNAHDKPLG---------------------------------------KRFACLKGHQVVVRSISFSHDGKLLASLGGDMYNTICIHDWKAQELLVSARGHTFRVHA--VAFNPFQAC-GRPETHRSKKPGQALHDDDACYTLVSCGVRHIRFWTLTK 422
BLAST of mRNA_Ecto-sp13_S_contig10195.215.1 vs. uniprot
Match: G4ZAV7_PHYSP (SH3 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZAV7_PHYSP) HSP 1 Score: 71.6 bits (174), Expect = 6.570e-9 Identity = 139/638 (21.79%), Postives = 225/638 (35.27%), Query Frame = 1 Query: 7 EVTAVAVHPHYDIVASGQAGREAIVCLFDATRRRTGAGGXXXXXXXXXXXXXXXXXAEAAEPSEAATAVASPVFLREISLGKRKTRGVAALDFSPCGDLILAMAGGEGQSLSVWDWRRGERLAAARAESVHLPASSVRFNPWLFLQGTSAVTAGLGPVGA-----ACYTLVSCGERHVRFWALTR-EWCP---RRGXXXXXXXVTVGGETYEDEMGGNERIDDGRGAEESEHGDGGGWRWSLSSRPGNFGVRGELGTMTCMSFIGE-PRAGKEERQRRKRQATGGAEDGRLPLPMARAITGSENGQIYFWE----------ISEAGQGKRLNKHQASPSHHHPRTFSPNRSGGGGGRTARQPVGWRPGGRLLAVVPKAHD-GAITDVSYLPHGE-DG-------RPTPAAGVVEAEAARVRFGGG-AEEGEGSSGG--QEWGRLATCGGKGTLRLWSVAGEGPSPLQLLLTISVSNRGVGV--------------------------GYPRSVSWDRSGTTLALGTVGNAVALVQPGEGTGTTPDRTMRATGSVMFMLAVQGHTDSCKALAPHPTRLWFITGGTDGVLRLWDAR----SRRQLSAARLVGKVCSAA--FHPAGELVAVGSEAGDFLLM 1728 EVT+V VHP+ IVASGQAGR A + +++A G + + K V ++ FS G LI ++ G ++ + DW+ E L +AR + + A + FNP+ G P A CYTLVSCG RH+RFW LT+ E+ P + T GG E++ W L +F R E+ T ++F+ + P + ++ AT + + R + G+ G + + ISE K K P + + + + + P GRL+ VVP + G +S E +G RP A + + +++ G A +G ++ L +CG G L LW+ P + + T V G P S+ W G+++ + T + + + ATG + L + + + A A HP +L T DG L WD + +RR + V + FHPAG + +G +G+ L++ Sbjct: 274 EVTSVTVHPNQRIVASGQAGRSAFLLVWNANDEPLG---------------------------------------KRFACLKGHQVAVRSISFSHDGKLIASLGGDMYNTICIHDWKSQELLVSARGHTFRVNA--IAFNPFQ-AYGRPETHRSKKPGQALHDDDVCYTLVSCGVRHIRFWTLTKAEYVPPPSKENADSAFSRSTFGGPPRLRPPTPTEKV------------------WKLEGNVPSFHGRFEVQDFTSLTFVNDSPPLYLYDEHSKELVATNSTDHS-----LGRIVAGTARGDLCLFIQPRASPSVDIISEKDLHKEPAKWWEIPDEYTDAEIN---------ELVLERISYEPTGRLVDVVPHDQETGNRFKLSRQVQAEMEGISKRMVLRPNSTA--LNSRLGELKYSGPLAHQGAAYQVAYCKKLNVLMSCGNDGKLLLWTCQMSRPIRIPGVNTHGVFTPLTGTFAEGSHALLPHGDPAKVFQLPNETSAAKPTSIVWKEDGSSVLVATSTSCIWELNV-------------ATGD--WQLLFEARSCAIGACAAHPMKLEVATVSQDGYLCFWDLQQHMCTRRVYLGTFITSSVKAFCMEFHPAGHELTIGLSSGELLVV 820
BLAST of mRNA_Ecto-sp13_S_contig10195.215.1 vs. uniprot
Match: A0A5D6XIE8_9STRA (SH3 domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIE8_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 6.780e-9 Identity = 60/184 (32.61%), Postives = 78/184 (42.39%), Query Frame = 1 Query: 10 VTAVAVHPHYDIVASGQAGREAIVCLFDATRRRTGAGGXXXXXXXXXXXXXXXXXAEAAEPSEAATAVASPVFLREISLGKRKTRGVAALDFSPCGDLILAMAGGEGQSLSVWDWRRGERLAAARAESVHLPASSVRFNPWLFLQGTSAVTAGLGPVGA-----ACYTLVSCGERHVRFWALTR 546 VT+ VHP+ IVASGQAGR+A V +++A GA R LG V A+ FS G L+ ++ G ++ V DW+ LA AR S + ++ FNP+ G P A ACYTLVSCG RH+RFW LTR Sbjct: 261 VTSAGVHPNQYIVASGQAGRQAPVLVWNAKDEPLGA--------------------------------------RFTRLGGHAV-AVRAVSFSHDGKLVASLGGDLYNTICVHDWKEQSLLATARGHSFRV--HTLAFNPFQAC-GRPEARRAKRPGQALSDDDACYTLVSCGVRHIRFWTLTR 402 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10195.215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10195.215.1 >prot_Ecto-sp13_S_contig10195.215.1 ID=prot_Ecto-sp13_S_contig10195.215.1|Name=mRNA_Ecto-sp13_S_contig10195.215.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=915bp KQEVTAVAVHPHYDIVASGQAGREAIVCLFDATRRRTGAGGGGRRGSQENback to top mRNA from alignment at Ecto-sp13_S_contig10195:575..5954+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10195.215.1 ID=mRNA_Ecto-sp13_S_contig10195.215.1|Name=mRNA_Ecto-sp13_S_contig10195.215.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5380bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10195:575..5954+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10195:575..5954+ >mRNA_Ecto-sp13_S_contig10195.215.1 ID=mRNA_Ecto-sp13_S_contig10195.215.1|Name=mRNA_Ecto-sp13_S_contig10195.215.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2745bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10195:575..5954+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |