mRNA_Ecto-sp13_S_contig10188.211.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A6H5LF55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LF55_9PHAE) HSP 1 Score: 580 bits (1494), Expect = 1.380e-203 Identity = 321/477 (67.30%), Postives = 336/477 (70.44%), Query Frame = 1 Query: 1 GGPLSSPQQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFRE--------ENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQT-------------------------------GAQEVVLSEIGVSPEGTTRRLLLEG--------------------------------------------------------------------------------LTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLVPAIEDSSKLTRGSGAGMALSKIGIPCPPGSTATVGGKPVPSLAETLSSRMVAQLGEGATQIF 1074 GGPLSSPQ+FLLANPPGPYTCLRTVDHRSVAML FHL+RLW SSQATGFGPAARAQGRQSLE+GTVETIARVTESFR+ ENAGGGCPECMTTVLYTHRRRPGKED GE LSDDDQP A AFT ARTSES RK AAR K+ +ICIMAHAWPLPTPPVDG+PAGVKVLIAGSGRS PEAKHS+WLRDRKRLDELKAQT GAQEVVLSEIG SPEGTTRRLLLEG LTSN FVVEEDGAVCTAPSGVLLGGMRQ+LISVCDKEGIEVR DAPDISRAGRWREAFLTGTGRVVAPVSTL+VP IEDSSK+TRGSGA +ALSKIGIPCPPG+ ATVGGKPVPSLAETL SR+VA+LGE ATQIF Sbjct: 92 GGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWHSSQATGFGPAARAQGRQSLEQGTVETIARVTESFRQGIYIVEKTENAGGGCPECMTTVLYTHRRRPGKEDVGEGLSDDDQPEGATAFTGARTSESPRKEAARRTKNSKICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSCPEAKHSSWLRDRKRLDELKAQTRRPVLKLISRDVFVRLAVSAVTFVHYVCLAVGAQEVVLSEIGFSPEGTTRRLLLEGMKRSSQAWTLPTFPEPKVILHPRCSPGLQRALPTDSALTSSSPLLRDVVRRTDQYSPTIANPKVLERLPALNTTPPHKSGLTSNFFVVEEDGAVCTAPSGVLLGGMRQLLISVCDKEGIEVRLDAPDISRAGRWREAFLTGTGRVVAPVSTLIVPEIEDSSKITRGSGAEVALSKIGIPCPPGNIATVGGKPVPSLAETLRSRVVAELGEAATQIF 568
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: D8LGW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW0_ECTSI) HSP 1 Score: 519 bits (1337), Expect = 1.800e-182 Identity = 258/283 (91.17%), Postives = 267/283 (94.35%), Query Frame = 1 Query: 1 GGPLSSPQQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTG 849 GGPLSSPQ+FLLANPPGPYTCLRTVDHRSVAML FHL+RLWQSSQATGFGPAARAQGRQSLE+ TVETIARVTESFREENAGGGCPECMTTVLYTHRRR GKEDAGE LSDDDQPG AFT RTS+ RKGAARP KD EICIMAHAWPLPTPPVDG+PAGVKVLIAGSGRSLP+AKHS+WLRDRKRL+ELKAQTGAQEVVLSEIG SPEGTTRRLLLEGLTSN FVVEEDGAV TAPSGVLLGGMRQ+LISVCDKEGIEVRFDAPDISRAGRWREAFLTG Sbjct: 93 GGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWQSSQATGFGPAARAQGRQSLEQETVETIARVTESFREENAGGGCPECMTTVLYTHRRRLGKEDAGEGLSDDDQPGGTTAFTGTRTSKRPRKGAARPTKDREICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSLPKAKHSSWLRDRKRLEELKAQTGAQEVVLSEIGFSPEGTTRRLLLEGLTSNFFVVEEDGAVSTAPSGVLLGGMRQLLISVCDKEGIEVRFDAPDISRAGRWREAFLTG 375
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A7S3BDZ0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BDZ0_9VIRI) HSP 1 Score: 117 bits (292), Expect = 1.440e-26 Identity = 99/301 (32.89%), Postives = 134/301 (44.52%), Query Frame = 1 Query: 16 SPQQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLVPAIEDSSKLT 918 +P ++L + P G YT RTV SV L FH+ RL +S+ G A A LE AR+ R +A G C M G S G A S + GAA + AHA PLP+ P P V+ ++ G+ RS EAK S W+ R LD + GA EVVL V G LLEGL+SN + VE DGA+ TA GVL G +R V + C++EG+ VR P ++ A W+ ++ T R+ PV L+ ++T Sbjct: 19 APGEWLQSGPRGAYTVARTVGLTSVFELDFHVQRLAKSASLMLEGDGAAAPAGSELE--ACCDAARL--HTRIVDAWGECVRAM----------------GPS-------GAKELKLSALLSWDVATGAAE--------LRAHAAPLPSRP----PHPVRAIVRGAPRSNAEAKDSAWIAARAGLDAVGKAAGANEVVL----VDGNGD----LLEGLSSNFYAVEADGALVTAEEGVLKGTVRDVALRACEREGVPVRLRPPRLADARSWKGCLVSSTSRLALPVDELVYEVAASGEEVT 272
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A061R9G1_9CHLO (Thioredoxin-like protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R9G1_9CHLO) HSP 1 Score: 105 bits (263), Expect = 2.080e-22 Identity = 81/294 (27.55%), Postives = 136/294 (46.26%), Query Frame = 1 Query: 22 QQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPR-----KDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLV 888 ++ L + G YT +RTV H S+ L++H+ RL +++ + ES + P C+++++ RP ++ + F D + K RP ++AH LP P + + V +AG+ RS AK+S W+R+RK L++ +A G EV+L + +G + EGL+SN FV++ DG + TA GVLLG +R V++ V D+EG+ V + P +S +W AF+T T R++ V L++ Sbjct: 39 KELLQRSKAGAYTTMRTVGHESILELTYHVERLANTARLM------------------------INESDSD------IPGCLSSLVDPQALRPYVLESVRAA--------VRQFLDINPEAAAVKAEMRPTVLITWDSAGFEVLAHVEALPELPR----SPIMVQVAGAPRSNAAAKNSEWVRERKELED-RAPKGCNEVLLMD----EQGN----VFEGLSSNFFVIK-DGTIQTAQDGVLLGTVRDVVLKVADREGVPVLLEPPSVSEIDQWXAAFITSTSRLLLRVDELIL 280
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A7S3XAY8_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XAY8_9CHLO) HSP 1 Score: 104 bits (260), Expect = 3.780e-22 Identity = 87/291 (29.90%), Postives = 125/291 (42.96%), Query Frame = 1 Query: 28 FLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLVPAIE 900 +L P G YT RTV R+V H++RL S++A P A Q L + +A +F N G E T L T + E ++ H PLP P VKVL+ G RS +AK S W+RDRK L++ K + EV+L +G+ L EGL+SN FVV+ DG + TA +L G +R + + VC K GI V+ +AP+I +W A ++ T R++ PV L P ++ Sbjct: 31 WLAEAPRGAYTTARTVRSRAVFEFEAHVDRLVASAKAMEAPPEASINMEQRLRD----AMASAVNAFERNNPGSD-GEVRLTALLTW------------------------------------------EGNENELLCHVGPLPQRPKQP----VKVLVRGEPRSNAKAKDSEWVRDRKPLEDSKPKD-VNEVILE----GEDGS----LYEGLSSNFFVVQ-DGTLYTAGKNILEGTVRLLTLEVCRKHGIPVKLEAPNIKDLEKWDGALISSTSRLLLPVMDLSAPDLD 260
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A2P6VR44_9CHLO (Class IV n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VR44_9CHLO) HSP 1 Score: 103 bits (256), Expect = 3.710e-21 Identity = 98/302 (32.45%), Postives = 133/302 (44.04%), Query Frame = 1 Query: 28 FLLANPPGPYTCLRTVDHRSVAM-LSFHLNRLWQSSQATGFGPAARAQGRQS------------------LEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTD-ARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPV 873 +L A P G YT RTV + A L FH+NRL SS A A A G Q+ L + + ++R A E TVL T PG D G+ QP ++ TD A S+ K A P + H PLP P V+V++ G R AK S W+R RK +++ + E VL V +G L EGLTSN+F V DGAV TA G+L G +R+V++ V +EGI V + P +S RW ++ T R++ PV Sbjct: 22 WLAAAPRGAYTTARTVGGGAAAFELGFHINRL-ASSAALMMQADAAAAGTQAAGPPXXXXXXXEAADAARLRPRVLAALRAAVRAYRAATAHSD-GELKLTVLVTW---PGS-DRGQQAGGQAQP--SSGSTDGASASDGASKSADAPPAAAAADVYVHVAPLPPRPAPP----VRVVMRGQPRQNAAAKDSEWVRQRKAIEQ-ELPPDVNEAVL----VGADGA----LFEGLTSNVFAVM-DGAVHTAGEGILAGSVREVVLQVARREGIPVVLEPPRLSDLPRWEGCMISSTSRLLLPV 301
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A7S2WBR7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WBR7_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.280e-19 Identity = 79/302 (26.16%), Postives = 138/302 (45.70%), Query Frame = 1 Query: 19 PQQFLLANPPGPYTCLRTVDHR-----SVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRA--GRWREAFLTGTGRVVAPVSTLLVPAIED 903 P+ F+ ++P G YTC+RT D V + FH+ R+ Q G + +EE + +A FR+ G + T+L PG++ GE + A+ + L++ A E+ ++ +A + G+ LP K S+W+ +R+ LD LK+ A EV+++++ + +LEGLT+N+FV+ +D + TAPS +L G +R +++ VC + G+ V F P +S A G+W F+T + +A V + + ED Sbjct: 19 PRDFINSHPCGVYTCMRTKDVHLQGADDVVDVEFHVKRILHGWQQLG----NTEMSHEKVEE-LLGRVAATCSGFRQAFPKAGGRGLIVTLLVF----PGEK------------GEPKIVSHAQPTSKLQEYA-------ELALITNAR----------------TVNGNREKLPSVKASSWISERQTLDLLKSSHNATEVIMTDL-------SGECVLEGLTTNVFVLCDDLKIYTAPSQILEGSVRDIVLEVCRELGVTVVFKFPRVSDAKKGKWLGCFVTNVSKPLAIVKNVKIMVSED 269
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A1Y2BFH4_9FUNG (Uncharacterized protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BFH4_9FUNG) HSP 1 Score: 87.8 bits (216), Expect = 4.480e-16 Identity = 86/296 (29.05%), Postives = 124/296 (41.89%), Query Frame = 1 Query: 22 QQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDG----AVCTAPSGVLLGG--MRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLVP 891 ++FLL N G YT RT++ V + HLNRL +S R ++ + T TI+ + +E SLS + TD T L + + I I +D KP V GS R+ P K S W RDRK L+ + G E++L++ T + EGLTSN FVV +DG AV TAP +LGG +R V SVC + GI R++ P + W AF+T + R++ PV +++P Sbjct: 7 KEFLLNNTRGAYTATRTLNRTKVMNWNIHLNRLIESWIGLSKVVGNREPAKEFDLDATKTTISAALGTCLQEYFASTA----------------------SLSKN-------GLTDEATITILLLEPSNNLAELRIHIEFQ--------LDTKPQPCTVAFYGSPRTYPCIKDSQWSRDRKPLELAAMKPGISELLLTD--------TDGNIYEGLTSNFFVVVQDGDGKLAVVTAPVQHVLGGTILRNVE-SVCGRLGIRFRYEFPKVGSVSTWVGAFVTSSLRILVPVQRIILP 256
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A1X2HWC4_SYNRA (Aminotransferase n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HWC4_SYNRA) HSP 1 Score: 88.6 bits (218), Expect = 4.910e-16 Identity = 89/303 (29.37%), Postives = 136/303 (44.88%), Query Frame = 1 Query: 25 QFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFRE-ENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVV--EEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDIS--RAGRWREAFLTGTGRVVAPVSTLLVPAIEDSSKLT 918 QF+L P G YT +RT+D S+ S H+ RL S F A G +S + I FR+ ++ + + L T R+R + +A S+ A+ D + + PR AH PL PP D A V V+ R+ P K S W+RDR L+ K T EVVL++ +G + EG+ SN F V VC +LLG + +++++VC+++ I + + P +S RAG W FLT T R++ P+ + V +D S +T Sbjct: 66 QFILQQPRGAYTGMRTLDRTSIVAFSSHVKRLTTSLSLMTFP----ANGAESAD------ITDQLAPFRDTDSLTHSLKDLLRIGLQTFRQRYPEYEAKVSV--------LIAY-DFKINT--------PR------CWAHFSPLHAPPPD---AYVHVVAEEKARATPVVKDSQWVRDRAGLERAKP-TEINEVVLTDA----DGH----IYEGMASNFFAVCANPTRLVCAPLDHILLGTVMKIVMTVCEQKKIPIEWVFPKLSDARAGTWEGCFLTSTSRLLLPIEAIHV---KDGSPVT 320
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A484EA90_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA90_BRELC) HSP 1 Score: 87.8 bits (216), Expect = 6.710e-16 Identity = 62/178 (34.83%), Postives = 89/178 (50.00%), Query Frame = 1 Query: 409 PRKD-GEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQ------EVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLVPAIEDSSKLTR 921 PR D + C+ H PLPTP VL+ G GR+ KH+ W++DR +++ A+ EV+LS + +LLLEGLT+NLFVV+ D V TA + VL G R +++ C I V +AP +S W+ AF+T TG + +P DSS T+ Sbjct: 143 PRPDIHDYCVAVHVCPLPTP----LRFTSTVLVYGEGRTNAHCKHTQWIKDRVIIEQHAARIRENRGEPIDEVLLSTTISGGD----KLLLEGLTTNLFVVKGD-KVYTAENDVLHGSTRMLVLKACADLSIPVVLEAPKLSERDLWQAAFVTRTGEEENAIEATSIP--SDSSGYTQ 309 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10188.211.1 >prot_Ecto-sp13_S_contig10188.211.1 ID=prot_Ecto-sp13_S_contig10188.211.1|Name=mRNA_Ecto-sp13_S_contig10188.211.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp GGPLSSPQQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGback to top mRNA from alignment at Ecto-sp13_S_contig10188:1..2777+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10188.211.1 ID=mRNA_Ecto-sp13_S_contig10188.211.1|Name=mRNA_Ecto-sp13_S_contig10188.211.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2777bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10188:1..2777+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10188:1..2777+ >mRNA_Ecto-sp13_S_contig10188.211.1 ID=mRNA_Ecto-sp13_S_contig10188.211.1|Name=mRNA_Ecto-sp13_S_contig10188.211.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10188:1..2777+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |