Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 0 |
Model size | 726 |
Hectar predicted targeting category | signal peptide |
Exons | 6 |
Cds size | 726 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681462513.3801339-CDS-Ecto-sp13_S_contig10183:2373..2449 | 1681462513.3801339-CDS-Ecto-sp13_S_contig10183:2373..2449 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10183 2374..2449 + |
1681462513.3931022-CDS-Ecto-sp13_S_contig10183:3034..3188 | 1681462513.3931022-CDS-Ecto-sp13_S_contig10183:3034..3188 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10183 3035..3188 + |
1681462513.405703-CDS-Ecto-sp13_S_contig10183:3688..3821 | 1681462513.405703-CDS-Ecto-sp13_S_contig10183:3688..3821 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10183 3689..3821 + |
1681462513.4155252-CDS-Ecto-sp13_S_contig10183:4436..4500 | 1681462513.4155252-CDS-Ecto-sp13_S_contig10183:4436..4500 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10183 4437..4500 + |
1681462513.425622-CDS-Ecto-sp13_S_contig10183:4766..4941 | 1681462513.425622-CDS-Ecto-sp13_S_contig10183:4766..4941 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10183 4767..4941 + |
1681462513.4348607-CDS-Ecto-sp13_S_contig10183:5235..5359 | 1681462513.4348607-CDS-Ecto-sp13_S_contig10183:5235..5359 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10183 5236..5359 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10183.209.1 >prot_Ecto-sp13_S_contig10183.209.1 ID=prot_Ecto-sp13_S_contig10183.209.1|Name=mRNA_Ecto-sp13_S_contig10183.209.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
VNVLFLVLSHTLCLLIQGPLLHRMEAVPAHVTLTVGGLLLSLRLTAKDED ENSTAQLLLLVFFVMLSASDLWEAWFFFSSPGDGPVPSLAFLSVPFLIAG ITSIVTARRNFPSNVRQDPKKTAAYEMLLTHGCCVFFPSASFWHAYPVPD RAMAHWATCSAGLLVSAWLLAADRRNVPVGLPTVFCCVLVAMADAGAAFW SVMAPPPTVYAPSPAILVVPYLAAAVACLGTASRVMRGAYR* back to topmRNA from alignment at Ecto-sp13_S_contig10183:2374..5359+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10183.209.1 ID=mRNA_Ecto-sp13_S_contig10183.209.1|Name=mRNA_Ecto-sp13_S_contig10183.209.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2986bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10183:2374..5359+ (Ectocarpus species13 EcNAP12_S_4_19m) GTCAACGTGCTGTTCCTAGTGTTGAGTCACACTCTGTGCTTGTTAATCCA
GGGCCCACTGCTTCACCGCATGGAAGGTACTGTTGTATCACCTGTACTCA
CATAGTATCATGATATTTGTAGGTATTCCATGCCTGTTGTTCAGAGTGCC
TGTGGCCCCGTTTGACCCAGGGTGTTGCATTCGCTTGTCGTCTCGTTGCG
ACATGATAGCACCCTGTGCTCGTGATTCGGGTTGAAAGGAGGCGAGACGC
CTCGGCGTGTCATCCGCTTGAAAGGAGGTACACACGGGGTCAGTGCACCG
TACAGATAACCGACGATCTCTAGCAAATGATATCAACCCGTCACCGGTGG
TGTTACGGTTTGTCCGAGGATACCAAAGCTGATACGGTGCGTGTTGTCCC
GAAAGGCGATTGCGGGAGTACTTCCGTTGGCACACGCCGGAACCATCCCT
CCTCTTGCTTGGTAGTCATTTTGCGGCCTCATTTCTTCATCCGTTGCTAG
CCTATTCTACTCCGCGCGAAAACAATCTTTGAGTGCCTCACCCCCTTGCC
AAAACCATCGCCCGCCAGCTATCCTTCCTCCGCGCGAAACCAACGAGTGT
AGCAGTTAGCACATGGTGACGGTTGTCGCCTACACTTCCTCTCCACACGC
GACTTGCTCAGCTGTGCCAGCGCACGTGACCTTGACGGTGGGAGGTCTTC
TTCTTTCCCTAAGACTCACGGCGAAGGATGAGGACGAGAACTCCACCGCT
CAATTGCTCTTATTGGTATTCTTCGTCATGTTGTCTGCTAGCGACCTGTG
GGAGGCGTGGTTTTTGTAAGTTTTCTTTCGCTTTTGGTTTGTTGGAAACA
CTCGCAAGACTTTCCTGTCGTCCATTTATATTTTTCTTTGTTTCTAGAGA
GGTGTGCTCCTTTTTGGGGTTGGTGGCTTGTGACCACGGAAGGCGTCCGC
GTCAGTTGAAACAGTACCGACAGTAGGAGGTACTGAGCGGAGACCAAGAC
GGTTTTTAATGTCAAGACAACAACAACAACAACAACAACTTGGTAGGTTT
GTTGGCGAAAGCGTCACCCCGTTCGACTGGCAAAAAGTTGTCCATCGTAT
GCAAAGTCGCCCGCGTCCACCCACCCTAGCTCTCTCCGCCACTTCAAAAA
TCCAAACAACCACGCCACCGTGCGAACGCGGTTTAAACATGTACCCTCTT
GATCGGTTCCACAGACGACGTACACTTCCCTCACCGCTGCCTCCTTCATG
GAACATGTGTACGGTGTATTCCGTGAGAGCGTCACACACCCCCTTCGCGC
GTATGTAACCGTCAGTTTCTCCTCGCCGGGGGACGGGCCCGTTCCGAGCC
TCGCATTCTTGAGCGTGCCCTTCTTGATTGCTGGGATCACCAGCATCGTC
ACGGCGAGAAGGAACTTTCCCTCCAACGTGCGGCAAGACCCGAAAAAAGT
GAGTGGGTCCGCGCATACATGATGCTGCAACGAGCACAACCGGCTGTTTT
TTCCTCGGGGGGGCGGGCGTTCGGCAAAGGCGCCGGCCTGGCGTTTGGGG
CTGAGGTCCTACAACCGTCAGGGTCTGGCCGCGCCGAAAGGGAAAGCGTC
AGCGACCGGCATAGTTGGCAGTGTTTCGTGTCGTGTTCTTAGCGGTAATT
TTGTTTTTTCGATCTGACAGCGGGTGGAGCTTCGCCCGCCAGGTTGTTGG
CAAGATACACGGCCGATCTTCGGGCTTGACACGGCACTCCACGAGGCGAG
GCAGTCTTCATCAACCTCTATAGTCGTGAAGCCTCGTCGCGGTACCGTAC
CGGCAGAGTATATCGCCTGTTCACGTACACCCCGTAAAGCGATGTGTCCC
TTACAAGAGAACTTAGCTTTTAGTATCGGCTTGGGTGATAATTTGGTGCA
TAAATCACGGTACGTTGGCATCACACACATGCGCTCACACACCTAACAGC
TTGTTCCGAACGGGTCCTCTGCTCTTATCCCAGCCTTTTGCGTCTGCCGC
CACCCCCGCGGTATCCCTTGCTCTCGCCCCACTCCCTCTCACGTTACCTC
CTTAATGCTGCAGACGGCCGCATACGAGATGCTGCTGACGCACGGCTGTT
GCGTTTTTTTCCCGTCGGCAAGCTTCTGTGAGTCCTATTTAGGTTGTTCA
TGCCCGCCGACTATGTATCGACTCCACCGTCGGCCCTGTTGCATGCCTCT
GCCTTGACCCTGTGGATAAAGGGACATCACTGCAGCGTGTACCGGTCGGG
GCGACTGCCCCTCCAAGTCCGGCAGCACTGTACGATGTACCATGGCATAA
AAACCGACTACGATGGTGATGCAGTTTTTGGTGGCATGGGTCATAGGCCA
TCTCACTCCTCACCCCATGCACCCGTCGGCTGCTACTATACAGGGCACGC
CTATCCCGTGCCGGATCGGGCAATGGCCCACTGGGCTACCTGCTCCGCAG
GGTTGCTTGTCTCGGCGTGGCTCCTCGCTGCTGATCGACGAAACGTTCCT
GTTGGCTTACCAACGGTGTTCTGCTGTGTACTCGTGGCTATGGCAGACGC
AGGGGCAGCGTTTTGGAGGTAAGTGTGGTTTGTCTGGAGGCTTGGCCGAG
CTGGTCCGTTCATGAATCATTGCCCACCACTCCCAAGAGCTAAGCTTGGA
CGGGTGTGCCGCGCAGTAAGCAACACCCGTCTGTTTTAACCAACAGCAGC
CAGGACCTGACTAGGTGTTGTTTCTGCGCTGGATTTTTTCTTCCTTTGCG
GTGCGTTCCTCCGTTTGACCGTGTCGCACGCGCCCCTCCAACTCACACCC
TCCCCCGCCACCCTCGGTTATGCTGTTTCTGTGTGGTTCCTGTGCGAATG
GCACATATGTAGTGTCATGGCACCACCGCCTACCGTGTATGCTCCGTCCC
CGGCAATACTTGTGGTCCCCTACTTAGCGGCGGCGGTCGCGTGCCTGGGA
ACGGCTTCTCGCGTGATGCGCGGTGCCTACCGATAA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10183:2374..5359+ >mRNA_Ecto-sp13_S_contig10183.209.1 ID=mRNA_Ecto-sp13_S_contig10183.209.1|Name=mRNA_Ecto-sp13_S_contig10183.209.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=726bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10183:2374..5359+ (Ectocarpus species13 EcNAP12_S_4_19m) GTCAACGTGCTGTTCCTAGTGTTGAGTCACACTCTGTGCTTGTTAATCCA GGGCCCACTGCTTCACCGCATGGAAGCTGTGCCAGCGCACGTGACCTTGA CGGTGGGAGGTCTTCTTCTTTCCCTAAGACTCACGGCGAAGGATGAGGAC GAGAACTCCACCGCTCAATTGCTCTTATTGGTATTCTTCGTCATGTTGTC TGCTAGCGACCTGTGGGAGGCGTGGTTTTTTTTCTCCTCGCCGGGGGACG GGCCCGTTCCGAGCCTCGCATTCTTGAGCGTGCCCTTCTTGATTGCTGGG ATCACCAGCATCGTCACGGCGAGAAGGAACTTTCCCTCCAACGTGCGGCA AGACCCGAAAAAAACGGCCGCATACGAGATGCTGCTGACGCACGGCTGTT GCGTTTTTTTCCCGTCGGCAAGCTTCTGGCACGCCTATCCCGTGCCGGAT CGGGCAATGGCCCACTGGGCTACCTGCTCCGCAGGGTTGCTTGTCTCGGC GTGGCTCCTCGCTGCTGATCGACGAAACGTTCCTGTTGGCTTACCAACGG TGTTCTGCTGTGTACTCGTGGCTATGGCAGACGCAGGGGCAGCGTTTTGG AGTGTCATGGCACCACCGCCTACCGTGTATGCTCCGTCCCCGGCAATACT TGTGGTCCCCTACTTAGCGGCGGCGGTCGCGTGCCTGGGAACGGCTTCTC GCGTGATGCGCGGTGCCTACCGATAA back to top
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