Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 591 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 420 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462513.2921739-UTR-Ecto-sp13_S_contig10182:1892..1925 | 1681462513.2921739-UTR-Ecto-sp13_S_contig10182:1892..1925 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10182 1893..1925 + |
| 1681462513.3088288-UTR-Ecto-sp13_S_contig10182:2345..2483 | 1681462513.3088288-UTR-Ecto-sp13_S_contig10182:2345..2483 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10182 2346..2483 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462513.300811-CDS-Ecto-sp13_S_contig10182:1925..2345 | 1681462513.300811-CDS-Ecto-sp13_S_contig10182:1925..2345 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10182 1926..2345 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10182.208.1 >prot_Ecto-sp13_S_contig10182.208.1 ID=prot_Ecto-sp13_S_contig10182.208.1|Name=mRNA_Ecto-sp13_S_contig10182.208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp
MEYIFSSSIQTVVLERDGTKHPTYMIMRKKLGKRNGMSSERGMSWPQPPE
DSLRESLWEPTQRLHITTTETSELHGSRLKIPPSSPWMSCLCCGRTLWMR
DVRCTMDCTRLSQKRDRFSKHARTPDTEPNCAWTPGRHN* back to topmRNA from alignment at Ecto-sp13_S_contig10182:1893..2483+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10182.208.1 ID=mRNA_Ecto-sp13_S_contig10182.208.1|Name=mRNA_Ecto-sp13_S_contig10182.208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=591bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10182:1893..2483+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTCGGTTCACAGCAGGAAGGCAACTTCCCAAAGATGGAGTATATCTTCTC
TTCATCAATTCAGACAGTCGTTCTGGAACGCGACGGGACCAAACACCCAA
CGTACATGATAATGCGCAAAAAATTAGGCAAGCGTAACGGGATGAGCTCA
GAAAGAGGAATGAGCTGGCCACAACCTCCAGAGGACTCCTTGCGAGAGTC
CTTGTGGGAACCAACACAACGATTACACATCACGACAACAGAAACAAGTG
AATTGCATGGTTCAAGATTAAAAATTCCCCCTTCCTCCCCCTGGATGTCC
TGTCTCTGTTGCGGACGTACGTTATGGATGAGAGACGTACGATGCACGAT
GGACTGCACGCGGCTATCTCAAAAACGTGATCGGTTCTCGAAGCATGCCC
GAACACCTGATACCGAGCCGAATTGCGCCTGGACACCTGGGCGCCACAAC
TAACTGGCATCATCAAGAAGATCCTTTCAAAATTGACCTGTAGTATTTCA
CAACGATGCAAACGGCGGAGCCGATAGTAGTCCATGCTGTCGCCGACTCA
TTTTCCGATCTCGATCCAGTGGCCTACTCTGGTGTCTGCTG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10182:1893..2483+ >mRNA_Ecto-sp13_S_contig10182.208.1 ID=mRNA_Ecto-sp13_S_contig10182.208.1|Name=mRNA_Ecto-sp13_S_contig10182.208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=420bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10182:1893..2483+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGTATATCTTCTCTTCATCAATTCAGACAGTCGTTCTGGAACGCGA
CGGGACCAAACACCCAACGTACATGATAATGCGCAAAAAATTAGGCAAGC
GTAACGGGATGAGCTCAGAAAGAGGAATGAGCTGGCCACAACCTCCAGAG
GACTCCTTGCGAGAGTCCTTGTGGGAACCAACACAACGATTACACATCAC
GACAACAGAAACAAGTGAATTGCATGGTTCAAGATTAAAAATTCCCCCTT
CCTCCCCCTGGATGTCCTGTCTCTGTTGCGGACGTACGTTATGGATGAGA
GACGTACGATGCACGATGGACTGCACGCGGCTATCTCAAAAACGTGATCG
GTTCTCGAAGCATGCCCGAACACCTGATACCGAGCCGAATTGCGCCTGGA
CACCTGGGCGCCACAACTAA back to top
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