mRNA_Ecto-sp13_S_contig1018.206.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1018.206.1 vs. uniprot
Match: A0A6H5L4S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S9_9PHAE) HSP 1 Score: 2000 bits (5182), Expect = 0.000e+0 Identity = 1219/1623 (75.11%), Postives = 1259/1623 (77.57%), Query Frame = 1 Query: 178 DGSEGDIRGALGVAPVFSST----APRTATNHRSDVAAGXXXXXXXXXXXXXXXSTAAHGTNTTSPPGLSLLSIRTAANEQGPNVKASSLPPAASTKSKAAQSGSDGGGQGSLPATTGVPPGTRVESKRPKDADSPEVCVVLVRRSTNGSIGRRGNGSGVGIIGATPAEACPVEHQPRVASSRRPSAGKQGGVGAXXXXXXXXXXXXXXXATASVPRCERAGPTKIGEGKRRAKKRSAWGGKDWGGQAVSQRAKDEILAAVSLWSVSRDGTLVGEDGNHFFC------SVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWFCPSCTDAGRVNLVAGKEPKWTPEDRARTAKREETRVKKPHKARPQSSLEKAGGGGARREGPSPVTISPLTTNGEKKGGCKNPKRAAAXXXXXXXXVSAVSLTVVNINAVVDPPCYVSRVKVFSPELDNLLLRSLLYEEKHVHILMRNVAKRPRPRNRTPAHQQKAAVRNGRGALDPGGREGGVPPTTGSVPGDGEDASNRKGRTDGSKRKA-EELGALAAHLPLSRRAGKRPKHHAYTDKRRLGAPFAGALGPAGVFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGYPEFAEEERSLTQQAEKRDAAARAEGSSRVFGSAGDGWRSRAPLSDLKIGAFTWKPQPAESGMEEEQTVGGVDTARGASNSVDHSVTSEGFPAKDTEIPRDGGDGSAGGWGQTRAGGRVSDRTDVEGDERGGVQHGAGGFGTXXXXXXXXSGPIHARGTPSSNGSNDGWAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQDKVTLGKNDPLRKENRMWNLKHMRATQEGKMDVCAYCRLHPDGGLMVCSTPELATIHSFCFPCLKRKNGIKLSDLTGGDVKWVCPPCLERKARPKRSPHPPTSLGGAARAGDRVPTSAGGPVPRRGRGQPAGGGRSREPDRGVAGAAKAGVKRS--------SXXXXXXXGKKEVHRQAALGPAAKVLPTFRSANSGSGGVGATKPRRYGTPLGAVSGSGGGTTGGEAXXXXKIVGSGKSGRRRTTGVGTSXGAGGXXXXXXXXXXXXXXXXXXXXXXX-REAGXXXXXXXPRDGGLAGVGAVQSLAGQLPIERRRLLRMVATFALDRLQQLDPLNLFKDPVPDGVEGYAEEIEYPIDFSTIRRRSQWELYGSIHLLALDVQLLCANARTFNDPGTVYHTGAGDVLKGAERIWPQAQALLDRLNSAETEASLHNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ASSPALLYTRRVIGEEESALRESLSLYRADCTDKALR-----------------------------------------------------------------------------------------------------------------------------RTVGSAKCEAIDLTTLHKRKAYTLPLPTPVARQFAAPDGEFLSHTPVRQPVPRGPIPSLRGKVKSEAAKVVVPEWKVLQAAHGATQRFGEEAARQMRAFRGLLREVAV 4608 DG +GDIRGALGVAPVFS T APRTATNHRSDVAAG XXXXXXXX STAAHGT T SPPGLSLLSI T ANEQG NVKASSLPPAASTKSKAAQ G+DGGGQGSLPA TGVPPG RVESKR KDADSPEVCVVLVRRS NGSIGRRGNG IIGATPAEA PVEHQPRVA+SRRPSAGK+GGVG XXXXXXXXXX ATASVPRC RAGPTK G+GK RAKKRSAWGGKDWGGQAVSQRAKDEILA VSLWSVS+DGTLVGEDGNHFFC SVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPW+CPSCTDAGRVNLVAG+EP WTPEDRAR AKREETRVKKPHKARPQSSLEKAG GGAR EGPSP+TISPLTT+GEKK CKNPKR AA XXX SAVSLTVVNINAVVDPPCY+SR +VFSPELDNLLLRSLLYEEK+VHI+ R+ +RPRPRNRTP+HQQKAA R+G G LD G +EGGVPPTTGSVPGDGEDASNR+GRTDG+KRKA EE+GALAAHLPLSRRAGKRPKHHAYTDKRRLGAPFAGALGPA VFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGYPEFAEEERSLTQQAEKRDAAA AEGSSRVFGSAGDGWRSR P DLKIGAFTWKPQP +SG+EE QTVG VDTA GASNS DHS TSEGFPA+DTE PRDGGDG AGG G+TRAGGRVSD DV GDERGGVQHGAGG XXXXXXX S PI+A GTPSS GSNDG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXD +K TLGKNDPLRKENRMWNLKHMRAT+EGKMDVCAYCRLHPDGGLMVCSTPELA HSFCFPCLKRKNGIKLSDLTGGDVKW+CPPCLERKARPKR+PHP ++LGGAARAGD VPTSA GP PRRGRGQPAGGGRSREPDRGVAGA KA VKRS +KEVHRQAA G AA+VL TFRSANSGSGGV ATKPRR GTPLG VSG XXXX X XXXXXXXXXXXXXXX R XXXXXXX GGLAGV VQ+L GQLPIERRRLLRMVATFALDRLQQLDPLNLFKDPVPDGVEGYAEEIEYPIDFSTIRRR QWE+YGSIH LALDVQLLCANARTFNDPGTVYHT AGDVLKGAERIWPQAQALLDRL SAETEAS HNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASA X ASSPALLYTRRVIGEEESALRESLSLYRADCTDKALR RTVGSAKCEAI LTTLHKRKA+TLPLPTPV RQFAAPDGEFLSHTPVRQ VPRGP PSLRGKVKSEAAKVVVPEWKVLQAAHGA QRFGEEAAR MRAFRGLL+E + Sbjct: 23 DGGKGDIRGALGVAPVFSFTGVAPAPRTATNHRSDVAAGAGXXXXXXXXGSPGGSTAAHGTKTISPPGLSLLSISTVANEQGHNVKASSLPPAASTKSKAAQPGADGGGQGSLPAATGVPPGKRVESKRSKDADSPEVCVVLVRRSRNGSIGRRGNG----IIGATPAEAFPVEHQPRVAASRRPSAGKEGGVGVASGGXXXXXXXXXXGATASVPRCGRAGPTKAGKGKGRAKKRSAWGGKDWGGQAVSQRAKDEILAGVSLWSVSQDGTLVGEDGNHFFCRWARDRSVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWYCPSCTDAGRVNLVAGREPNWTPEDRARMAKREETRVKKPHKARPQSSLEKAGEGGARWEGPSPLTISPLTTSGEKKARCKNPKRTAAAAXXX----SAVSLTVVNINAVVDPPCYISRAEVFSPELDNLLLRSLLYEEKYVHIVARHAIRRPRPRNRTPSHQQKAAARDGGGPLDLGRKEGGVPPTTGSVPGDGEDASNRRGRTDGNKRKADEEIGALAAHLPLSRRAGKRPKHHAYTDKRRLGAPFAGALGPARVFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGYPEFAEEERSLTQQAEKRDAAAGAEGSSRVFGSAGDGWRSRVPSPDLKIGAFTWKPQPEKSGIEEGQTVGEVDTACGASNSGDHSGTSEGFPAQDTETPRDGGDGGAGGRGKTRAGGRVSDHMDVGGDERGGVQHGAGGSXXXXXXXXXGSVPIYACGTPSSTGSNDGXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKNTLGKNDPLRKENRMWNLKHMRATREGKMDVCAYCRLHPDGGLMVCSTPELAKNHSFCFPCLKRKNGIKLSDLTGGDVKWLCPPCLERKARPKRNPHPSSTLGGAARAGDGVPTSADGPAPRRGRGQPAGGGRSREPDRGVAGAGKADVKRSXXXXXXXGKLPAAAAPREKEVHRQAASGLAARVLHTFRSANSGSGGVDATKPRRDGTPLGVVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTSGRSTSRGXXXXXXXXXXXXGGLAGVWEVQALPGQLPIERRRLLRMVATFALDRLQQLDPLNLFKDPVPDGVEGYAEEIEYPIDFSTIRRRLQWEVYGSIHQLALDVQLLCANARTFNDPGTVYHTAAGDVLKGAERIWPQAQALLDRLTSAETEASRHNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASAAARARAEQETGEQETGVSGGXKKRRADGGAGGRRGRVKATAVEVAVAVASSPALLYTRRVIGEEESALRESLSLYRADCTDKALRLFVEIMRMVKKPGGWKQKLWKGDKLELPLFGIPRDMTRIEFKNCCDREGLHCLARGQVGREHEHVRVKLTKGDSQECLGVDIEKLSNYVRKFGWRVCIANMIETEKGSRASKSEEVREEAEGERWRTVGSAKCEAIHLTTLHKRKAHTLPLPTPVTRQFAAPDGEFLSHTPVRQSVPRGPNPSLRGKVKSEAAKVVVPEWKVLQAAHGARQRFGEEAARHMRAFRGLLKEEGI 1635
BLAST of mRNA_Ecto-sp13_S_contig1018.206.1 vs. uniprot
Match: D7FI07_ECTSI (GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI07_ECTSI) HSP 1 Score: 1831 bits (4743), Expect = 0.000e+0 Identity = 1113/1438 (77.40%), Postives = 1154/1438 (80.25%), Query Frame = 1 Query: 355 TSPPGLSLLSIRTAANEQGPNVKASSLPPAASTKSKAAQSGSDGGGQGSLPATTGVPPGTRVESKRPKDADSPEVCVVLVRRSTNGSIGRRGNGSGVGIIGATPAEACPVEHQPRVASSRRPSAGKQGGVGAXXXXXXXXXXXXXXXATASVPRCERAGPTKIGEGKRRAKKRSAWGGKDWGGQAVSQRAKDEILAAVSLWSVSRDGTLVGEDGNHFFCSVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWFCPSCTDAGRVNLVAGKEPKWTPEDRARTAKREETRVKKPHKARPQSSLEKAGGGGARREGPSPVTISPLTTNGEKKGGCKNPKRAAAXXXXXXXXVSAVSLTVVNINAVVDPPCYVSRVKVFSPELDNLLLRSLLYEEKHVHILMRNVAKRPRPRNRTPAHQQKAAVRNGRGALDPGGREGGVPPTTGSVPGDGEDASNRKGRTDGSKRKAEELGALAAHLPLSRRAGKRPKHHAYTDKRRLGAPFAGALGPAGVFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGYPEFAEEERSLTQQAEKRDAAARAEGSSRVFGSAGDGWRSRAPLSDLKIGAFTWKPQPAESGMEEEQTVGGVDTARGASNSVDHSVTSEGFPAKDTEIPRDGGDGSAGGWGQTRAGGRVSDRTDVEGDERGGVQHGAGGFGTXXXXXXXXSGPIHARGTPSSNGSNDGWAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----DQDKVTLGKNDPLRKENRMWNLKHMRATQEGKMDVCAYCRLHPDGGLMVCSTPELATIHSFCFPCLKRKNGIKLSDLTGGDVKWVCPPCLERKARPKRSPHPPTSLGGAARAGDRVPTSAGGPVPRRGRGQPAGGGRSREPDRGVAGAAKAGVKRSSXXXXXXXGKKEVHRQAALGPAAKVLPTFRSANSGSGGVGATKPRRYGTPLGAVSGSGGGTTGGEAXXXXKIVGSGKSGRRRTTGVGTSXGAGGXXXXXXXXXXXXXXXXXXXXXXXREAGXXXXXXXPRDGGLAGVGAVQSLAGQLPIERRRLLRMVATFALDRLQQLDPLNLFKDPVPDGVEGYAEEIEYPIDFSTIRRRSQWELYGSIHLLALDVQLLCANARTFNDPGTVYHTGAGDVLKGAERIWPQAQALLDRLNSAETEASLHNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPALLYTRRVIGEEESALRESLSLYRADCTDKALRRTVGSAKCEAIDLTTLHKRKAYTLPLPTPVARQFAAPDGEFLSHTPVRQPVPRGPIPSLRGKVK--SEAAKVVVPEWKVLQAAHGATQRFGEEAARQMRAFRGLLREVAVVSRTRLRLGKSAVQ 4650 +S P S TAAN+QGPNVKASSLPPAASTKSKAAQ G+ GGGQGSLPA TGVPP TRV+SKRPKDADSPEVCVVLVRRSTNGSIGRRGNGS GIIGATPAEA PVEHQPRVA+SRRPSAGK+GGVGA XXXXXXXXXXXXXXATASVPRCERAGPTK+G+GK RAKKRSAWGGKDWGGQAVSQ AKDEILA VSLWSVS+DGTLVGEDGNHFFCSVCGESGDITCCD+CPRVFHEECLPIGT+SHLAAHHQTEKDPW+CPSCTDAGRVNLVAG+EP WTPEDRA+ AKREETRVKK HKARPQSSLEKAGGGGARREGPSPVTISPLTT+GEKK CKNPKRAA XXXXX S V LTVV INAVVDPPC +SR +VFSPELDNLLLRSLLYEEK+VHI+ R+ +RPRPRN TP +QQK+A GRGALD G +EGGVP TTGS+PGDG ASNR+GRTDG+ RKAEELGAL AHLPLS RAGKRPKHHAYTDKRRLGAPFAGALGPA VFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGYPEFAEEER+LT+QAEKRDAAA AEGSSR FGSAGDGWRS P DLKIGAFTWKPQP ES +EEEQTVG V TAR A S DHS TSEGFP +DTE PR GGDGSAGGW QTRA GRVSD DVEG ER GV++GAGG GT X GPIHAR TPSS G+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D +K TLGKNDPLRKENRMWNLKHMRATQEGKMDVC YCR PDGGLMVCST ELA IHSFCFPCLKRKNGIKLSDLTGGDVKW CPPCL RKARPKR PHPP+SLGGAARAGD VPTSAGGPVPRRGRGQPAGGGRSREPDRGVAGA KAGVKRSS S+ S SG +QLDPLNLFKDPVPDGVEGYAE IEYPIDFSTIRRRSQWELYGSIH LALDVQLLCANARTFNDPGTVYHT AGDVLKGAERIWPQAQALLDRL SAET+AS HNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPALLYTRRVIGEEESALRESLSLYRADCTDKALRRTV SAKCEAIDLTTLHKRKAYTLPLPTPV RQFAAPDGE LSHTPVRQPVPRGP P+L GKVK EAAKVVVPEWKVLQAAHGA QRFGEEAAR MRAFRGLL+EVAVVSRTRLRLGKSAVQ Sbjct: 96 SSMPDTSSSLTSTAANKQGPNVKASSLPPAASTKSKAAQPGAGGGGQGSLPAATGVPPRTRVKSKRPKDADSPEVCVVLVRRSTNGSIGRRGNGSRAGIIGATPAEAFPVEHQPRVAASRRPSAGKEGGVGAAXXXXXXXXXXXXXXATASVPRCERAGPTKVGKGKGRAKKRSAWGGKDWGGQAVSQGAKDEILAGVSLWSVSQDGTLVGEDGNHFFCSVCGESGDITCCDQCPRVFHEECLPIGTDSHLAAHHQTEKDPWYCPSCTDAGRVNLVAGREPDWTPEDRAQMAKREETRVKKSHKARPQSSLEKAGGGGARREGPSPVTISPLTTSGEKKARCKNPKRAAXXXXXX----STVPLTVVTINAVVDPPCNISRAEVFSPELDNLLLRSLLYEEKYVHIVARHAIRRPRPRNPTPPYQQKSAA--GRGALDLGRKEGGVPRTTGSIPGDGRHASNRRGRTDGNTRKAEELGALVAHLPLSPRAGKRPKHHAYTDKRRLGAPFAGALGPARVFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGYPEFAEEERALTEQAEKRDAAAGAEGSSRGFGSAGDGWRSSVPSPDLKIGAFTWKPQPVESSVEEEQTVGRVGTARAARYSGDHSGTSEGFPEQDTEAPRAGGDGSAGGWEQTRASGRVSDHMDVEGGERNGVRYGAGGSGTGQXSAGSGIGPIHARETPSSTGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHEKTTLGKNDPLRKENRMWNLKHMRATQEGKMDVCTYCRFQPDGGLMVCSTSELAKIHSFCFPCLKRKNGIKLSDLTGGDVKWECPPCLARKARPKRKPHPPSSLGGAARAGDGVPTSAGGPVPRRGRGQPAGGGRSREPDRGVAGAGKAGVKRSSSS---------------------------SSFSSSG---------------------------------------------------------------------------------------------------------------------------------KQLDPLNLFKDPVPDGVEGYAEAIEYPIDFSTIRRRSQWELYGSIHQLALDVQLLCANARTFNDPGTVYHTAAGDVLKGAERIWPQAQALLDRLTSAETKASRHNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPALLYTRRVIGEEESALRESLSLYRADCTDKALRRTVESAKCEAIDLTTLHKRKAYTLPLPTPVTRQFAAPDGELLSHTPVRQPVPRGPNPTLGGKVKVKPEAAKVVVPEWKVLQAAHGARQRFGEEAARHMRAFRGLLKEVAVVSRTRLRLGKSAVQ 1371
BLAST of mRNA_Ecto-sp13_S_contig1018.206.1 vs. uniprot
Match: D7FHY8_ECTSI (Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY8_ECTSI) HSP 1 Score: 1366 bits (3536), Expect = 0.000e+0 Identity = 927/1437 (64.51%), Postives = 994/1437 (69.17%), Query Frame = 1 Query: 475 GSDGGGQGSLPATTGVPPGTRVESKRPKDADSPEVCVVLVRRSTNGSIGRRGNGSGVGIIGATPAEACPVEHQPRVASSRRPSAGKQGGVGAXXXXXXXXXXXXXXXATASVPRCERAGPTKI---GEGKRRAKKRSAWGGKDWGGQAVSQRAKDEILAAVSLWSVSRDGTLVGEDGNHFFCSVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWFCPSCTDAGRVNLVAG-----KEPKWTPEDRARTAKREETRVKKPHKARPQSSLEKAGGGGARREGPSPVTISPLTTNGEKKGGCKNPKRAAAXXXXXXXXV--------------SAVSLTVVNINAVVDPPCYVSRVKVFSPELDNLLLRSLLYEEKHVHILMRNVAKRPRPRNRTPAHQQKAAVRNGRGALDPGGREGGVPPTTGSVPGDGEDASNRKGRTDGSKRKAEE-LGALAAHLPLSRRAGKRPKHHAYTDKRRLGAPFAGALGPAGVFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGYPEFAEEERSLTQQAEKRDAAARAEGSSRVFGSAGDGWRSRAPLSDLKIGAFTWKPQPAESGMEEEQTVGGVDTARGASNSV-DHSVTSEGFPAKDTEIPRDGGDGSAGGWGQTRAGGRVSDRTDVEGDERGGVQHGAGGFG-TXXXXXXXXSGPIHARGTPSSNGSNDGWAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DQDKVTLGKNDPLRKENRMWNLKHMRATQEGKMDVCAYCRLHPDGGLMVCSTPELATIHSFCFPCLKRKNGIKLSDLTGGDVKWVCPPCLERKARPKRSPHPPTSLGGAARAGDRVPTSAGGPVPRRGRGQPAGGGRSREPDRGVAGAAKAGVKRSSXXXXXXXGKKEVHRQAALGPAAKVLPTFRSANSGSGGVGATKPRRYGTPLGAVSGSGGGTTGGEAXXXXKIVGSGKSGRRRTTGVGTSXGAGGXXXXXXXXXXXXXXXXXXXXXXXREAGXXXXXXXPRDGGLAGVGAV-------------QSLAGQLPIERRRLLRMVATFALDRLQQLDPLNLFKDPVPDGVEGYAEEIEYPIDFSTIRRRSQWELYGSIHLLALDVQLLCANARTFNDPGTVYHTGAGDVLKGAERIWPQAQALLDRLNSAETEASLHNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------ASSPALLYTRRVIGEEESALRESLSLYRADCTDKALRRTVGSAKCEAIDLTTLHKRKAYTLPLPTPVARQFAAPDGEFLSHTPVRQPVPRGPIPSLRGKVKSEAAKVVVPEWKVLQAAHGATQRFGEEAARQMRAFRGLLREVAVVSRTRLRLGKSAVQ 4650 G+D GGQ G+ + K+ + V+ ST + G NG G G+ G TP A +VA S +A G XXXXXXXXXXXXXX P ER GP+ KRS WGGKDW G+A SQ KDE+LA VSLWS+++DGTLVGEDGNHFFCS CGESGD+TCCDECPRVFHEECLPIGT+SHLAA+ QTE+DPW+CPSCTDAGRVNL+AG KEP WTPEDR + KREET+ KKPHKA+ Q GG +RE S VT SPL T+ EKK CKNPK XXXXXXXX S V L VVN+N VDPP VSRVKVFSPELDNLLLRSLLYEEKHVHILMRNVAKRPRPRNRTPAHQQKAA R+G GA++PGGREGGVP TTGSVPGDGEDASNR+GRT+GSK KA+E LGALAAHLP+S RAGKRPKHHAYTDKRRLGAPFAGALGP VFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGYPE AEEER+LTQQ EKRDAA AEGSSR FGSAGDGWRSR P SDLKIG+ +WK QPAES +EEEQ +DT RGAS S D S TSEGFPAKDTE PRDGG SAGG GQTR GGRVSD DVEGDE GV+HGA G G SGPIH R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D++KVTLGK DPLRKENRMWNLKHMRATQEGKMDVCAYCRLHPDGGLMVCS+ ELA +HSFCFPCLKRK+GI+ SDL GG +KW CP C ER++RPKR PP+SL G AG G XXXXXXX XXXX R G A XXXXXXXXXXXXXXXXXX G XXXXXX G G + LAGQLPIERRRLLRMV T ALDRLQQLDPLNLFKDPVPDGVEGYAE IE+PIDFSTIRRRSQWELYGSIH LALDVQLLCANARTFN PGT+YH A +VLKGAERIWPQAQALLDRL SAET+AS HNIMGPAASSDAWPLDGPFAG ELTPANEDAYYMHVAIRRASA XXXXXXXXXXXXXXXXXXXXXXXX ASSPALLYTR +GEEESALRESLSLYR DCTDKALRR VGSAKCE IDL TLHKR+AYTLP+PTPV RQFAAPDGEFL+ +P QPVP G PSL ++K EA K VVPEWKVLQAAH A +R GEEA R +RAFRG L+E+AVVSRTRLRLGKS VQ Sbjct: 714 GADAGGQKRAKVAKGL--------EGHKEGTGQGLAAVMNHGSTKANTGHINNGVGTGVGGVTPPAAGFRVGNAKVAGSHPRAATPTHSGGKKXXXXXXXXXXXXXXXXXXPPDSERTGPSGAKGXXXXXXXXXKRSPWGGKDWAGKAASQAVKDELLAEVSLWSIAQDGTLVGEDGNHFFCSACGESGDLTCCDECPRVFHEECLPIGTDSHLAANRQTEEDPWYCPSCTDAGRVNLIAGDLHRKKEPNWTPEDRTQMTKREETKAKKPHKAKSQPK-----GGELQRERSSSVTTSPLLTSREKKARCKNPKXXXXXXXXXXXXXXXXXXXXXXXAQGYSTVPLMVVNVNDAVDPPREVSRVKVFSPELDNLLLRSLLYEEKHVHILMRNVAKRPRPRNRTPAHQQKAAARDGGGAVNPGGREGGVPRTTGSVPGDGEDASNRRGRTNGSKIKADEDLGALAAHLPISPRAGKRPKHHAYTDKRRLGAPFAGALGPGRVFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGYPELAEEERALTQQVEKRDAAEGAEGSSRAFGSAGDGWRSRVPSSDLKIGSSSWKSQPAESSIEEEQPARRIDTPRGASRSGGDGSGTSEGFPAKDTEAPRDGGSSSAGGRGQTRDGGRVSDHMDVEGDESNGVKHGARGSGRAPGSAGSGGSGPIHVRRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDREKVTLGKKDPLRKENRMWNLKHMRATQEGKMDVCAYCRLHPDGGLMVCSSQELAKMHSFCFPCLKRKDGIEKSDLVGGGIKWECPTCRERRSRPKRGAGPPSSLRGTTWAG---------------------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGDAFGFRRDASPRGXXXXXXXXXXXXXXXXXXTSRGAVGNXXXXXXXXXXXXXGAGGSRLDVETEPQQQEQEDLAGQLPIERRRLLRMVTTLALDRLQQLDPLNLFKDPVPDGVEGYAEAIEHPIDFSTIRRRSQWELYGSIHELALDVQLLCANARTFNGPGTIYHKEATNVLKGAERIWPQAQALLDRLASAETKASQHNIMGPAASSDAWPLDGPFAGLELTPANEDAYYMHVAIRRASAAARARAEXXXXXXXXXXXXXXXXXXXXXXXXSEGELAARRGRVEAAVEVAVAVASSPALLYTRGEMGEEESALRESLSLYRTDCTDKALRRPVGSAKCEPIDLPTLHKRRAYTLPMPTPVTRQFAAPDGEFLAQSPEGQPVPSGTNPSLGEEIKGEAPKAVVPEWKVLQAAHAARERSGEEAGRHLRAFRGFLKEIAVVSRTRLRLGKSTVQ 2104
BLAST of mRNA_Ecto-sp13_S_contig1018.206.1 vs. uniprot
Match: A0A6H5JJY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY6_9PHAE) HSP 1 Score: 1337 bits (3461), Expect = 0.000e+0 Identity = 912/1385 (65.85%), Postives = 978/1385 (70.61%), Query Frame = 1 Query: 577 VCVVLVRRSTNGSIGRRGNGSGVGIIGATPAEACPVEHQPRVASSRRPSAGKQGGVGAXXXXXXXXXXXXXXXATASVPRCERAGPTKIGEGKRRAK----KRSAWGGKDWGGQAVSQRAKDEILAAVSLWSVSRDGTLVGEDGNHFFCSVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWFCPSCTDAGRVNLVAGKEPKWTPEDRARTAKREETRVKKPHKARPQSSLEKAGGGGARREGPSPVTISPLTTNGEKKGGCKNPKRAAAXXXXXXXXV--------------SAVSLTVVNINAVVDPPCYVSRVKVFSPELDNLLLRSLLYEEKHVHILMRNVAKRPRPRNRTPAHQQKAAVRNGRGALDPGGREGGVPPTTGSVPGDGEDASNRKGRTDGSKRKA-EELGALAAHLPLSRRAGKRPKHHAYTDKRRLGAPFAGALGPAGVFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGYPEFAEEERSLTQQAEKRDAAARAEGSSRVFGSAGDGWRSRAPLSDLKIGAFTWKPQPAESGMEEEQTVGGVDTARGASNSV-DHSVTSEGFPAKDTEIPRDGGDGSAGGWGQTRAGGRVSDRTDVEGDERGGVQHGAGGFGTXXXXXXXX-SGPIHARGTPSSNGSNDGWAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQDKVTLGKNDPLRKENRMWNLKHMRATQEGKMDVCAYCRLHPDGGLMVCSTPELATIHSFCFPCLKRKNGIKLSDLTGGDVKWVCPPCLERKARPKRSPHPPTSLGGAARAGDRVPTSAGGPVPRRGRGQPAGGGRSREPDRGVAGAAKAGVKRSSXXXXXXXGKKEVHRQAALGPAAKVLPTFRSANSGSGGVGATKPRRYGTPLGAVSGSGGGTTGGEAXXXXKIVGSGKSGRRRTTGVGTSXGAGGXXXXXXXXXXXXXXXXXXXXXXXREAGXXXXXXXPRDGGLAGVGAVQSLAGQLPIERRRLLRMVATFALDRLQQLDPLNLFKDPVPDGVEGYAEEIEYPIDFSTIRRRSQWELYGSIHLLALDVQLLCANARTFNDPGTVYHTGAGDVLKGAERIWPQAQALLDRLNSAETEASLHNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------ASSPALLYTRRVIGEEESALRESLSLYRADCTDKALRRTVGSAKCEAIDLTTLHKRKAYTLPLPTPVARQFAAPDGEFLSHTPVRQPVPRGPIPSLRGKVKSEAAKVVVPEWKVLQAAHGATQRFGEEAARQMRAFRGLLREVAVVSRTRLRLGKSAVQ 4650 + V+ ST + G NG G G G TP +VA S +A G XXXXXXXXXXXXX P ER G + + +GK KRS WGGKDW G+ SQ KD++LA VSLWSV++DGTLVGEDGNHFFCS CGESGD+TCCDECPRVFHEECLPIGT+SHLAA+ QTE+DPW+CPSCTDAGRVNL+AGKEP WTPEDRA+ AK EET+ KKPHKA+ GG +RE S VT SPL T+ EKK CKNPKRAAA XXXXXXX S V LTVVN+N VVDPP VSRVKVFSPELDNLLLRSLLYEEKHVHIL RNVAKRPRPRNRTPAHQQKAA R+G G LD G +EGGVP TTGSVPGDGEDASNR+GRT+G+KR A EELGALAAHLP+S RAGKRPKHHAYTDKRRLGAPFAGALGP VFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGY E A+EER+LT+Q EKRDAAA AEGSSRVFGSAGD WR R P SDLKIG+ +WK QPAES +EEEQ +DT RGAS S D S TSEGFPAKDTE PRDGG SAGG QT GGRVSD DV GDE GV+HGA G G XXXXX SG IH R P XXXXXXXXXXXXXXXXXXXXXXXXXXXX D++KVTLGK DPLRKENRMWNLKHMRATQEGKMDVCAYCRLHPDGGLMVCS+ ELA +HSFCFPCLKRK+GI+ SDL GG +K G +V + GGRSREP+ G AG XXXXXXX R G G +A GTS GA GXXXXXXXXXXXXXXXXXX + L GQLPIERRRLLRMVAT ALDRLQQLDPLNLFKDPVPDGVEGYAE IE+PIDFSTIRRRSQWELYGSIH LALDVQLLCANARTFN PGT+YH A +VLKGAERIWPQAQALLDRL SAETEAS HNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ASSPALLYTR IGEEESALRESLSLYR DCTDKALRR VGSAKCE IDL TLHKR+AYTLP+PT + RQFAAPDGEFL+ +P Q VP GP PSL ++K EA K VVPEWKVLQAAHGA +R GEEA R +RAFRG L+E+AVVSRTRLRLGKS +Q Sbjct: 640 LAAVMNHGSTKANTGHLNNGVGTGGDGVTPPPGGFRVGNAKVAGSHPRAATPTHSGGEKGXXXXXXXXXXXXXXXXXPPDSERTGHSGV-KGKXXXXXXXXKRSPWGGKDWAGKPASQAVKDDLLAEVSLWSVAQDGTLVGEDGNHFFCSACGESGDLTCCDECPRVFHEECLPIGTDSHLAANRQTEEDPWYCPSCTDAGRVNLIAGKEPNWTPEDRAQMAKSEETKAKKPHKAK---------GGELQRERSSSVTTSPLLTSPEKKTRCKNPKRAAAAXXXXXXXXXXXXXXXXXXXQGYSTVPLTVVNVNDVVDPPREVSRVKVFSPELDNLLLRSLLYEEKHVHILTRNVAKRPRPRNRTPAHQQKAAARDGGGPLDLGRKEGGVPQTTGSVPGDGEDASNRRGRTNGNKRTADEELGALAAHLPISPRAGKRPKHHAYTDKRRLGAPFAGALGPGRVFDGTAVSFGARATGPFRAGLAATMVEMGLVPSEVATEAGYRELAKEERALTRQVEKRDAAAGAEGSSRVFGSAGDDWRLRVPSSDLKIGSSSWKSQPAESSIEEEQPARRIDTPRGASKSGGDGSGTSEGFPAKDTETPRDGGSSSAGGRRQTLDGGRVSDHMDVGGDESNGVKHGARGSGKGPGXXXXXXSGHIHVRRPPXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXGDREKVTLGKKDPLRKENRMWNLKHMRATQEGKMDVCAYCRLHPDGGLMVCSSQELAKMHSFCFPCLKRKDGIEKSDLVGGGIKGN---------------------------GQQVSVA---------------GGRSREPEGGAAGXXXXXXXIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGDAFGFRR---------DASPRGXXX---XXXXXXXXXXGTSRGAVGXXXXXXXXXXXXXXXXXXSRLDVETEPQQEEQ--------------EHLDGQLPIERRRLLRMVATLALDRLQQLDPLNLFKDPVPDGVEGYAEAIEHPIDFSTIRRRSQWELYGSIHELALDVQLLCANARTFNGPGTIYHEEATNVLKGAERIWPQAQALLDRLTSAETEASRHNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGELAARRGRVEAAVEVAVAVASSPALLYTRGEIGEEESALRESLSLYRTDCTDKALRRPVGSAKCEPIDLPTLHKRRAYTLPMPTLMTRQFAAPDGEFLAQSPEDQLVPSGPNPSLGEEIKVEAPKAVVPEWKVLQAAHGARERSGEEAGRHLRAFRGFLKEIAVVSRTRLRLGKSTIQ 1944
BLAST of mRNA_Ecto-sp13_S_contig1018.206.1 vs. uniprot
Match: A0A6H5KC71_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC71_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.330e-23 Identity = 58/120 (48.33%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 820 ERAGPTKIGEGKRR-AKKRSAWGGKDWGGQAVSQRAKDEILAAVSLWSVSRDGTLVGEDGNHFFCSVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWFCPSCTDAGRVN 1176 ERAG G R+ A KR WGGKDW G +S++ + + W + + G ++G DG+HFFCSVCG G++ CCDECPRVFH CL + NS AA QT D W CP CT+ GR N Sbjct: 490 ERAGAQSPKSGTRKPAHKRHPWGGKDWAGHPISKKLQKHVKENDKAWRM-QGGIMMGADGSHFFCSVCGYPGEVICCDECPRVFHPGCLRVRLNSQQAAAGQTTADTWHCPVCTE-GRGN 607
BLAST of mRNA_Ecto-sp13_S_contig1018.206.1 vs. uniprot
Match: D8LBA9_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA9_ECTSI) HSP 1 Score: 118 bits (296), Expect = 2.110e-23 Identity = 61/131 (46.56%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 820 ERAGPTKIGEGKRR-AKKRSAWGGKDWGGQAVSQRAKDEILAAVSLWSVSRDGTLVGEDGNHFFCSVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWFCPSCTDAGRVNLVAGK-EPKWT 1206 ERAG G R+ A+KR WGGKDW G +S++ + + W + + G ++G DG+HFFCSVCG G++TCCDECPRVFH CL + NS AA QT + W CP CT+ GR N + EP+ T Sbjct: 482 ERAGTQAPKSGTRKPAQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRM-QGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTE-GRGNQSGRRGEPQLT 610
BLAST of mRNA_Ecto-sp13_S_contig1018.206.1 vs. uniprot
Match: A0A1E7FH07_9STRA (PHD-type domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FH07_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 9.590e-15 Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 991 DGNHFFCSVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWFCPSCT 1158 DGN C +CG++GD+ CCD CP+V+H +CLP ++S A Q + +PW+CP CT Sbjct: 1 DGNFHLCKICGDAGDLVCCDGCPQVYHPQCLPEDSDSFAALDDQDDDEPWYCPDCT 56
BLAST of mRNA_Ecto-sp13_S_contig1018.206.1 vs. uniprot
Match: A0A7S2YKC8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YKC8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.080e-13 Identity = 42/123 (34.15%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 802 ASVPRCERAGPTKIGEGKRRAKKRSAWGGKDWGGQAVSQRAKDEILAAVSLWSVSRDGTLVGEDGNHFFCSVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWFCPSCTDAGR 1170 A P+ AG TK K+ K+ K + AVS ++A ++ + +G DGN ++C+VCGE GD+ CCD CP+V+H++C+P+ SH + +++PW+CP CT G+ Sbjct: 20 AHSPKTAAAGGTKSASIKKEPKESP----KSFASDAVSPNGSAPVVALGTVMV-----STLGNDGNQYYCAVCGEFGDVICCDGCPKVYHQDCIPL---SHEPPNALDDEEPWYCPVCTTEGK 130
BLAST of mRNA_Ecto-sp13_S_contig1018.206.1 vs. uniprot
Match: A0A448ZG10_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZG10_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.390e-12 Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 985 GEDGNHFFCSVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWFCPSC 1155 G+DGN +C++CGE GD+ CCD CP V+H +CLP + S A Q + DPW+CP C Sbjct: 259 GKDGNFHYCNICGEVGDVVCCDGCPHVYHPQCLPADSESFAALDTQHDDDPWYCPDC 315
BLAST of mRNA_Ecto-sp13_S_contig1018.206.1 vs. uniprot
Match: X1WJC9_ACYPI (Bromo domain-containing protein n=2 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WJC9_ACYPI) HSP 1 Score: 75.1 bits (183), Expect = 7.680e-10 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 3538 PIERRRLLRMVATFALDRLQQLDPLNLFKDPVPDGVE-GYAEEIEYPIDFSTIRRRSQWELYGSIHLLALDVQLLCANARTFNDPGTVYHTGAGDVLKGAERI 3843 P E R+ L+ + T L L++ DP LF PV D + Y+ I P+DF TIRR Q +LY S++ D +L+C NA T+N P T+Y+ A +L ++ Sbjct: 34 PSENRQTLQQLLTHLLRALERRDPQQLFAWPVTDRIAPNYSRLISKPMDFETIRRSIQSDLYTSLNAFVADFKLMCENAMTYNQPETIYYKAAKRLLHAGLKL 136 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1018.206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1018.206.1 >prot_Ecto-sp13_S_contig1018.206.1 ID=prot_Ecto-sp13_S_contig1018.206.1|Name=mRNA_Ecto-sp13_S_contig1018.206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1516bp MSSTPDTSSSSTSTSAAGGDGSEGDIRGALGVAPVFSSTAPRTATNHRSDback to top mRNA from alignment at Ecto-sp13_S_contig1018:9430..19621+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1018.206.1 ID=mRNA_Ecto-sp13_S_contig1018.206.1|Name=mRNA_Ecto-sp13_S_contig1018.206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10192bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1018:9430..19621+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1018:9430..19621+ >mRNA_Ecto-sp13_S_contig1018.206.1 ID=mRNA_Ecto-sp13_S_contig1018.206.1|Name=mRNA_Ecto-sp13_S_contig1018.206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4548bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1018:9430..19621+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |