Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 0 |
Start | 0 |
Model size | 268 |
Hectar predicted targeting category | other localisation |
Exons | 3 |
Cds size | 267 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681462512.9196138-CDS-Ecto-sp13_S_contig10175:555..579 | 1681462512.9196138-CDS-Ecto-sp13_S_contig10175:555..579 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10175 556..579 - |
1681462512.9294412-CDS-Ecto-sp13_S_contig10175:1496..1647 | 1681462512.9294412-CDS-Ecto-sp13_S_contig10175:1496..1647 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10175 1497..1647 - |
1681462512.937299-CDS-Ecto-sp13_S_contig10175:3008..3100 | 1681462512.937299-CDS-Ecto-sp13_S_contig10175:3008..3100 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10175 3009..3100 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10175.203.1 >prot_Ecto-sp13_S_contig10175.203.1 ID=prot_Ecto-sp13_S_contig10175.203.1|Name=mRNA_Ecto-sp13_S_contig10175.203.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp
ASLSNTNTREDKPGAAHSSRGSMPVCGIPCSLSLKQQSPEVFGSSRLLHQ KPYVLLRACLAFNSLYWLIRSMSVFGNAHWLLYLTHWTF back to topmRNA from alignment at Ecto-sp13_S_contig10175:555..3100- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10175.203.1 ID=mRNA_Ecto-sp13_S_contig10175.203.1|Name=mRNA_Ecto-sp13_S_contig10175.203.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2546bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10175:555..3100- (Ectocarpus species13 EcNAP12_S_4_19m) GCCTCGCTTTCTAACACGAACACTCGAGAAGACAAGCCAGGCGCAGCACA
CTCCTCACGAGGATCCATGCCGGTCTGCGGCATTCCTTGCAGGTGATTTT
GCTCGCAGAGCAACCCGTGGTGCTACACGGGGCGTCCGCGACGCATGGGC
GGTGTAATAGCGTTCGCACGTTCGTTGCGGATCCGTTGATGCTATGTCAA
ACGCTGTTGGTGTGTTGTTTTTGGTACACGCAGTACGCTCACAGGACAGT
AGACGTTTTAAAGCGGGGTGGGCAATTCCTCGCGGTTCTCTGTCAGCCTC
TCGGTTTCGAATTGGAAGAGAAAATGCAAGTCAAGACTCGACGTGTATTG
GGCGAGAAAATGCATTGCTTTACATTTGTATCAATCGAGACAGCAGTGTC
AGCAGCGCGGAACATGCCCTCGATCGGAGATTTGGAGATGCAGTCGATGT
GAGACAACAACAGCATCAACAATCGATGGATGTGCTTGCCTCCATCCATC
TGTCCGTAAAATAGCTCCCTGTCTCTCTGTCTCCCTCTGAGGCCGAAGGA
AGGACATGCAGATGCAGAGAAATCAATGTCAAACATCTGACGGTGTTTCC
TTCCCCACCCCTCATTGTACACAGCAGTTTGACGTTTGAGACCAGATTCC
TCAGTTTTACATATGCATTATCGGATTAACTGCGTTTGACACGTTGATAG
ATACTGCCGTCCTTCCACATACACCGTGATACCCAGGACAAAGCGTTCGT
TTCATGTTGCCGGTAGAGACCACACGTATATCACCGCATAGCGGCAAACC
CGTCTAAAAGTGATCTCAAGGGGATATGCGTCAAAACAAAAAGCTCGTAC
ATGCAGTGATTGAACGGCAGGATTGCGTAGGATACCACACCCCCCTCGAC
CTACTCTCAGTATGTACAACTAGCCTTCGCAGGTTTGTTGCATTCAGCAA
ACATGTTGGATAAAGCGTAGAAGTACAATCGGCCTACGTCGCAAAGTCTA
TGTGGCATCTACTCTCCCAACGCAAACAATACATAGTCGGTCGCGGTCCC
GACAACGGCGGGCGATGCACGTGTCTCGACGAGAACTTGCCCAGGACGTA
TGCATACGTATCGTTTGTCGTGTGCTGACACCCTCTTCCTCGTGGGGCGG
TGATCTCATCGGCTTTTGAAAATCGGGTGCAGTACATGCACATCTTACGC
AGCCGACGGTAGGGCGGATACCTACCACCTTGGCTTGCATGAACAAACCC
AACTGCGCTACCCATTTTTTGCCTTCTTTCCGCCCACGCGTCCGTCCCCT
CTGCGCCCCCCCCCCCCCCCCCTGTCGGAATTGGCTATTCGGCATTTCCA
TTCGTGCGTGTTCGCGCTGCGGACAAATGCGACGGAAATGAACATAACCG
GAACGATCCCATCAAATTATCATCATCATCATCATCATCATCATCATCAC
CAGCCTCTCGCTGAAGCAACAGAGCCCCGAGGTGTTCGGCTCGTCGCGGC
TGCTGCACCAGAAGCCCTATGTCCTGCTGCGCGCTTGCCTGGCGTTCAAC
AGCCTTTACTGGCTCATCCGCTCCATGTCCGTCTTTGGCAACGCCCACTG
GCTGGTGAGTGGAGGGTGGGTGGGCGATGCGCAACCGCTGCTGCAGTGTT
GTTGATGTTGTTGGCGATGGTGAACTTTTGCCTGTTTGCGCTCTTGTGTA
TGTCGTTGTTGTTGTTGGTGGTGGCTGTTGCATATTCGCTGGGTGCACAA
TCATTGGTGATACTGTGTAGCTCTCGAGGGCGGACTACCAGCCGTGGTGA
TGGTTGTCGTCGTCGTCATCATTTTGTTGTTTTGGTCGTTTGAATCACGT
CTTCACTTTGTACGGCAAGGTCGTTGCACTTCTTTCGCGACCGTTGGGGA
CGTGACAATTTTGGTAGCGGCGTCAGTTGGTGCGTTTTGGATATAGGGAC
CGCGACTCCAATCGAGGAAAAAACTGGGCCAACAGATGAAGAGCTGGGTG
TGTTCCTCTGCTTGTTGCCTTTTTCCATAGATAGAGCACCACCACCAAAC
ATCCATCCACAGGGTCAATTTCGAAGCTCGGCCTAGCAGGGTACGCAGCA
GGGCTTTTTCTTCTGCCAGTGGCATCTTTCCTGGTCGGGGGAAAGAACGA
AAGCGCGTGCGTGACGACGACGCCGTCCGACAAAGGCAGACAGGCCCTTC
AGACAAGGCACCCGCAACGCGTACCCCCCCCCCCACCCGCCGCGCCCCCA
GCGTGCGTTTTCAGTCGGGACATTTGGGCCCTGGTCGTTGCTACCGCTCC
CGCTCGTGGTTCTTCTATACACACATACATGACAGCGAAGGTTTTCTCCT
TGGTGACCCCTTTTTACCTCTTGCTGGTCCCTTGTACTTCTTACTGACTC
CTGTACATTTTACCGTCGGACAACCAACCGTCCTGCCCGTCTTGCCGGCT
ATCCTTGTCGCAATCATCGGCTCCCTATCGCCACCGCCGCCGCACCGCCG
TGGCCGCGTTTTTTTCTGCAGCTCTACCTCACCCACTGGACGTTCG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10175:555..3100- >mRNA_Ecto-sp13_S_contig10175.203.1 ID=mRNA_Ecto-sp13_S_contig10175.203.1|Name=mRNA_Ecto-sp13_S_contig10175.203.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=267bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10175:555..3100- (Ectocarpus species13 EcNAP12_S_4_19m) GCCTCGCTTTCTAACACGAACACTCGAGAAGACAAGCCAGGCGCAGCACA CTCCTCACGAGGATCCATGCCGGTCTGCGGCATTCCTTGCAGCCTCTCGC TGAAGCAACAGAGCCCCGAGGTGTTCGGCTCGTCGCGGCTGCTGCACCAG AAGCCCTATGTCCTGCTGCGCGCTTGCCTGGCGTTCAACAGCCTTTACTG GCTCATCCGCTCCATGTCCGTCTTTGGCAACGCCCACTGGCTGCTCTACC TCACCCACTGGACGTTC back to top
|