Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 564 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-12_000550.1 |
| Cds size | 546 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462512.314077-CDS-Ecto-sp13_S_contig10169:232..778 | 1681462512.314077-CDS-Ecto-sp13_S_contig10169:232..778 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10169 233..778 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462512.3245552-UTR-Ecto-sp13_S_contig10169:778..796 | 1681462512.3245552-UTR-Ecto-sp13_S_contig10169:778..796 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10169 779..796 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10169.195.1 >prot_Ecto-sp13_S_contig10169.195.1 ID=prot_Ecto-sp13_S_contig10169.195.1|Name=mRNA_Ecto-sp13_S_contig10169.195.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MMLNTLSGIKIAPFPARRHDVKLGSDKKRGVGTGIYPDDKFAALVCGLEA
MVHLGATAAGKARADAFLAPFRDISKRVRTFVARFRVGFMGEFGQMLVDN
VENAIDRDLLRVGAAAGEALDLLRARFPHSPPKGDLDQLDTPSITPMSFD
HTRQATDELTSMLLASVAVAPGSRGAGWVAAK back to topmRNA from alignment at Ecto-sp13_S_contig10169:233..796- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10169.195.1 ID=mRNA_Ecto-sp13_S_contig10169.195.1|Name=mRNA_Ecto-sp13_S_contig10169.195.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=564bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10169:233..796- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGTCGGAATCGGTGTTCATGATGCTCAACACTCTATCTGGCATCAAGAT
CGCGCCGTTCCCTGCACGCCGGCACGACGTTAAGCTCGGAAGCGACAAGA
AGAGAGGTGTCGGAACAGGTATTTACCCTGACGACAAGTTCGCAGCGTTG
GTGTGCGGGCTCGAGGCGATGGTACATCTCGGTGCGACCGCTGCGGGCAA
AGCTCGCGCTGACGCCTTTCTGGCGCCTTTTCGCGACATTTCCAAGCGCG
TGCGCACGTTCGTCGCTAGGTTTCGCGTCGGCTTTATGGGCGAGTTCGGC
CAGATGTTGGTGGACAACGTGGAAAATGCTATTGATCGAGACTTACTGAG
AGTGGGGGCGGCTGCTGGCGAGGCTTTGGACCTGTTGAGGGCACGCTTTC
CGCACTCGCCTCCAAAGGGTGACCTTGACCAGCTCGACACTCCGAGCATC
ACGCCGATGTCCTTTGACCACACGCGACAGGCCACGGATGAACTCACCAG
CATGCTTCTAGCTTCGGTGGCGGTGGCCCCGGGTTCTAGGGGGGCAGGAT
GGGTGGCGGCCAAA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10169:233..796- >mRNA_Ecto-sp13_S_contig10169.195.1 ID=mRNA_Ecto-sp13_S_contig10169.195.1|Name=mRNA_Ecto-sp13_S_contig10169.195.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=546bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10169:233..796- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGCTCAACACTCTATCTGGCATCAAGATCGCGCCGTTCCCTGCACG
CCGGCACGACGTTAAGCTCGGAAGCGACAAGAAGAGAGGTGTCGGAACAG
GTATTTACCCTGACGACAAGTTCGCAGCGTTGGTGTGCGGGCTCGAGGCG
ATGGTACATCTCGGTGCGACCGCTGCGGGCAAAGCTCGCGCTGACGCCTT
TCTGGCGCCTTTTCGCGACATTTCCAAGCGCGTGCGCACGTTCGTCGCTA
GGTTTCGCGTCGGCTTTATGGGCGAGTTCGGCCAGATGTTGGTGGACAAC
GTGGAAAATGCTATTGATCGAGACTTACTGAGAGTGGGGGCGGCTGCTGG
CGAGGCTTTGGACCTGTTGAGGGCACGCTTTCCGCACTCGCCTCCAAAGG
GTGACCTTGACCAGCTCGACACTCCGAGCATCACGCCGATGTCCTTTGAC
CACACGCGACAGGCCACGGATGAACTCACCAGCATGCTTCTAGCTTCGGT
GGCGGTGGCCCCGGGTTCTAGGGGGGCAGGATGGGTGGCGGCCAAA back to top
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