mRNA_Ecto-sp13_S_contig1016.191.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1016.191.1 vs. uniprot
Match: D7G1F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F2_ECTSI) HSP 1 Score: 121 bits (303), Expect = 3.850e-32 Identity = 68/74 (91.89%), Postives = 70/74 (94.59%), Query Frame = 1 Query: 1 MASTLGVLDVLSKLREESERASTALTAQQETNRTLLQKCIEAETQSGRTDEAKEALQHRSVQLEQWHRNAETGR 222
MASTLGVLDVLSKLREESERASTALTAQQETNRTLLQKCIEAET+SGRTDEAKEALQ R VQLEQ H +AETGR
Sbjct: 1 MASTLGVLDVLSKLREESERASTALTAQQETNRTLLQKCIEAETESGRTDEAKEALQLRKVQLEQGHEDAETGR 74 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1016.191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1016.191.1 >prot_Ecto-sp13_S_contig1016.191.1 ID=prot_Ecto-sp13_S_contig1016.191.1|Name=mRNA_Ecto-sp13_S_contig1016.191.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=74bp MASTLGVLDVLSKLREESERASTALTAQQETNRTLLQKCIEAETQSGRTDback to top mRNA from alignment at Ecto-sp13_S_contig1016:18623..19796+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1016.191.1 ID=mRNA_Ecto-sp13_S_contig1016.191.1|Name=mRNA_Ecto-sp13_S_contig1016.191.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1174bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1016:18623..19796+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1016:18623..19796+ >mRNA_Ecto-sp13_S_contig1016.191.1 ID=mRNA_Ecto-sp13_S_contig1016.191.1|Name=mRNA_Ecto-sp13_S_contig1016.191.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=222bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1016:18623..19796+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |