mRNA_Ecto-sp13_S_contig10159.189.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10159.189.1 vs. uniprot
Match: D8LRN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN5_ECTSI) HSP 1 Score: 876 bits (2263), Expect = 3.770e-316 Identity = 493/526 (93.73%), Postives = 499/526 (94.87%), Query Frame = 1 Query: 1 MATETAPPPSASGADTPEVVSFSSSDAPIQAVTVFCKDKAEVTRVINFLSPSSLGRHEVELADLPHRFLINETSVRVKGSGYCTILHVSYTDEPPMDPAEPELTQEEEDAAKDREEKRKQDIQRLTDELSVLNQQSSRNMHMREYADRFAERAVTATAGGSTNAAAALGVSDNGPAPRVEDVGKALDWWAARAVQTDAEVHRLELEGRRLKDAITELHKPPATSSASARVPKATEKVTKKPGRILITVDVQELGNIELEVKYMTRGATWSPSYDLRVDTQTDSVSCTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLKTYRMPEPSFNKPRGAMKGMRKKSGASSRRSSFGSVGECEEDGECSSLDDTMSAALCVGGYGGGAPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVSLVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKV 1578 MATETAPPPSASGAD P+ VSF SSDAPIQAVTVFCKDKAEVTRVINF SPSSLGRHEVELADLPHRFLINETS+RVKGSG+CTILHVSYTDEPPM PAEPELTQEEEDAAKDREEKRKQDIQRLTDEL+VLNQQSSRNMHMREYADRFAERAVTATAGGSTNAAAALGVSDNGPAPRVEDVGKALDWWAARAVQTDAEVHRLELEGRRLK+AITELHK PATSSASARVPKATEKVTKKPGRILITVDVQELGNIELEVKYMTRGATWSPSYDLRVDTQTDSVSCTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLK YRMPEPSFNKPRGAMKGMRKKSGASSRRSSFGSVGECEEDGE SSLDDTMSAALCVG XXXXXXXXXXXXXXXX XXXX MGAVS VVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVK+ Sbjct: 1 MATETAPPPSASGADAPKAVSFLSSDAPIQAVTVFCKDKAEVTRVINFSSPSSLGRHEVELADLPHRFLINETSLRVKGSGHCTILHVSYTDEPPMGPAEPELTQEEEDAAKDREEKRKQDIQRLTDELTVLNQQSSRNMHMREYADRFAERAVTATAGGSTNAAAALGVSDNGPAPRVEDVGKALDWWAARAVQTDAEVHRLELEGRRLKEAITELHKRPATSSASARVPKATEKVTKKPGRILITVDVQELGNIELEVKYMTRGATWSPSYDLRVDTQTDSVSCTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLKIYRMPEPSFNKPRGAMKGMRKKSGASSRRSSFGSVGECEEDGESSSLDDTMSAALCVGXXXXXXXXXXXXXXXXXXXXXXXXXKPAVAQVEXXXXGMGAVSFVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKI 526
BLAST of mRNA_Ecto-sp13_S_contig10159.189.1 vs. uniprot
Match: D8LRN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN7_ECTSI) HSP 1 Score: 598 bits (1543), Expect = 4.370e-207 Identity = 358/526 (68.06%), Postives = 399/526 (75.86%), Query Frame = 1 Query: 1 MATETAPPPSASGADTPEVVSFSSSDAPIQAVTVFCKDKAEVTRVINFLSPSSLGRHEVELADLPHRFLINETSVRVKGSGYCTILHVSYTDEPPMDPAEPELTQEEEDAAKDREEKRKQDIQRLTDELSVLNQQSSRNMHMREYADRFAERAVTATAGGSTNAAAALGVSDNGPAPRVEDVGKALDWWAARAVQTDAEVHRLELEGRRLKDAITELHKPPATSSASARVPKATEKVTKKPGRILITVDVQELGNIELEVKYMTRGATWSPSYDLRVDTQTDSVSCTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLKTYRMPEPSFNKPRGAMKGMRKKSGASSRRSSFGSVGECEEDGECSSLDDTMSAALCVGGYGGGAPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVSLVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKV 1578 MATETAPPPS GAD P+ VSFSSSDAPIQAVTVF K KAEVTR+INF SPSSLGRHEVELADLP F I++TSVRV GSG+CTIL+VSY++EPP P TQEE DAAK R EKRKQDIQRLT+EL++L+QQ SRN+ +R YADRFA +T TAGGS NAAA GVS++GP P+VEDVGKALDWW RAVQTDAE HRLELE +RL +AI EL KP + S+ +A TKKPGRILITVDVQELGNIELEVKYMTRGA+WSPSYDLRVDTQTDSVSCTYYGMVTQST+EDWQGVSLRLSTAEPTVHGTPPAL SKT+ +KT + PEPS + G+R +G +++ + G XXXXXXXXXXXXXX +GAVS VE PADIKSN Q KKLTVG LQLS EV+HY+VPAK AAYLQAKATNNTDYLLLASN+VSIFFDNSFVTKTSL+SVSPGESFQTFLGIDPAVK+ Sbjct: 1 MATETAPPPSVPGADAPKAVSFSSSDAPIQAVTVFRKGKAEVTRIINFSSPSSLGRHEVELADLPRSF-IDQTSVRVTGSGHCTILNVSYSEEPPTLP-----TQEERDAAKARGEKRKQDIQRLTNELTILSQQCSRNVQLRWYADRFA---MTTTAGGSANAAATPGVSNDGPGPKVEDVGKALDWWTTRAVQTDAEQHRLELERQRLTEAIAELQKPSSASNVAASAGNVAAMATKKPGRILITVDVQELGNIELEVKYMTRGASWSPSYDLRVDTQTDSVSCTYYGMVTQSTSEDWQGVSLRLSTAEPTVHGTPPALGSKTLCIKTVQKPEPSSHARSRRRAGLRTGAG----------------------MEELVPMQARFHAASGAXXXXXXXXXXXXXXXXXXRAIPATAQVEGGGRFLGAVSFAVEAPADIKSNGQMKKLTVGELQLSVEVTHYIVPAKAPAAYLQAKATNNTDYLLLASNNVSIFFDNSFVTKTSLSSVSPGESFQTFLGIDPAVKI 495
BLAST of mRNA_Ecto-sp13_S_contig10159.189.1 vs. uniprot
Match: D8LRN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN8_ECTSI) HSP 1 Score: 564 bits (1453), Expect = 1.270e-193 Identity = 341/531 (64.22%), Postives = 373/531 (70.24%), Query Frame = 1 Query: 1 MATETAPPPSASGADTPEVVSFSSSDAPIQAVTVFCKDKAEVTRVINFLSPSSLGRHEVELADLPHRFLINETSVRVKGSGYCTILHVSYTDEPPMDPAEPELTQEEEDAAKDREEKRKQDIQRLTDELSVLNQQSSRNMHMREYADRFAERAVTATAGGSTNAAAALGVSDNGPAPRVEDVGKALDWWAARAVQTDAEVHRLELEGRRLKDAITELHKPPATSSASARVPKATEKVTKKPGRILITVDVQELGNIELEVKYMTRGATWSPSYDLRVDTQTDSVSCTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLKTYRMPEPSF-----NKPRGAMKGMRKKSGASSRRSSFGSVGECEEDGECSSLDDTMSAALCVGGYGGGAPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVSLVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKV 1578 MATETAPPPS GAD P+ VSFSSSDAPIQAVTVF K KAEVTR+INF SPSSLGRHEVELA+LP F I++TS+RVKGSG+CTILHVSY++EPP P +P TQEE D AK EEKRKQDIQ+LTDEL+VLNQQSSRN H+RE VEDVGKALDWW A+A QTDAE HRLELEGRRLK+AI EL P ++ +A TEK KK GRILITVDVQELGNIELEVKYMTRGA+WSPSYDLRVDTQTDSVSCTYYG+VTQSTTEDWQGVSLRLSTAEPTVHGTPPAL SKTV+ KT + P P ++ RG G SRR+ + EE G +AA C G G + +GAVS VVETPADIKSN Q KKLTVG LQLS EV+HY+VPAK AAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVK+ Sbjct: 1 MATETAPPPSVPGADKPKAVSFSSSDAPIQAVTVFRKGKAEVTRIINFSSPSSLGRHEVELAELPRNF-IDQTSIRVKGSGHCTILHVSYSEEPPP-PTQP--TQEERDTAKAGEEKRKQDIQKLTDELTVLNQQSSRNSHVRE----------------------------------VEDVGKALDWWTAKAEQTDAEQHRLELEGRRLKNAIAELQSPSRSAIVAALARIKTEKTAKKLGRILITVDVQELGNIELEVKYMTRGASWSPSYDLRVDTQTDSVSCTYYGIVTQSTTEDWQGVSLRLSTAEPTVHGTPPALGSKTVAFKTVQKPIPRSKPILGSRDRGTPGGGGFPLLKPSRRAQSSTHMTVEESGA------PRAAAECSFGATGAGFAKITCSSVPPPPPRAMPATAQVESGGGF---LGAVSFVVETPADIKSNGQMKKLTVGELQLSVEVTHYIVPAKAPAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKI 484
BLAST of mRNA_Ecto-sp13_S_contig10159.189.1 vs. uniprot
Match: D8LRN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN6_ECTSI) HSP 1 Score: 538 bits (1385), Expect = 8.760e-184 Identity = 327/531 (61.58%), Postives = 352/531 (66.29%), Query Frame = 1 Query: 1 MATETAPPPSASGADTPEVVSFSSSDAPIQAVTVFCKDKAEVTRVINFLSPSSLGRHEVELADLPHRFLINETSVRVKGSGYCTILHVSYTD--EPPMDPAEPELTQEEEDAAKDREEKRKQDIQRLTDELSVLNQQSSRNMHMREYADRFAERAVTATAGGSTNAAAALGVSDNGPAPRVEDVGKALDWWAARAVQTDAEVHRLELEGRRLKDAITELHKPPATSSASARVPKATEKVTKKPGRILITVDVQELGNIELEVKYMTRGATWSPSYDLRVDTQTDSVSCTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLKTYRMPEPSFNKPR---GAMKGMRKKSGASSRRSSFGSVGECEEDGECSSLDDTMSAALCVGGYGGGAPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVSLVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKV 1578 MATET P PS GA P+ VSFSSSD IQAVTVFCK KAEVTRVINF SPSSLGRHEVELA+LP F I++TS+RVKGSG+CTILHVSY++ EPP P TQEEEDAAK R EK KQDIQRLTDEL+VLNQQSSRN MRE VEDVG ALDWW A+A QTDAE HRLELEGRRL+ AI +L P ++ +A TK PGRILITVDVQELGNIEL+VKYMT GA+WSPSYDLRVDTQTDSVSCTYYGMVTQST+EDWQGVSLRLSTAEPTVHGTPP L SKTVS+KT P +N P+ G M GM SL G P +GAVS VVETPADIKSN Q KKLTVGVLQLS EV+HY+VPAK AAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSL SVSPGESFQTFLGIDPAVK+ Sbjct: 1 MATETLP-PSVLGAAAPKAVSFSSSDVRIQAVTVFCKGKAEVTRVINFSSPSSLGRHEVELAELPRGF-IDQTSIRVKGSGHCTILHVSYSEDLEPPTLP-----TQEEEDAAKARREKYKQDIQRLTDELTVLNQQSSRNSRMRE----------------------------------VEDVGNALDWWTAKAEQTDAEQHRLELEGRRLQKAIDDLQSPSCVANVAASAANVAAMATKNPGRILITVDVQELGNIELQVKYMTSGASWSPSYDLRVDTQTDSVSCTYYGMVTQSTSEDWQGVSLRLSTAEPTVHGTPPVLGSKTVSIKTVPKPVHGYNNPQSSMGVMLGM--------------------------SLGARQQPQYARGRMAASVP------------PPPPRARPAVTQVEGGGGFLGAVSFVVETPADIKSNGQMKKLTVGVLQLSVEVTHYIVPAKAPAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLASVSPGESFQTFLGIDPAVKI 452
BLAST of mRNA_Ecto-sp13_S_contig10159.189.1 vs. uniprot
Match: A0A6H5KAH2_9PHAE (DUF4139 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAH2_9PHAE) HSP 1 Score: 435 bits (1119), Expect = 4.010e-144 Identity = 284/366 (77.60%), Postives = 291/366 (79.51%), Query Frame = 1 Query: 628 LKDAITELHKPPATSSASARVPKATEKVTKKPGRILITVDVQELGNIELEV--------------------KYMTRGATWSPSYDLRVDTQTDSVSCTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLKTYRMPEPSFNKPRGAMKGMRKKSGASSRRSSFGSVGECEEDGECSSLDDTMSAALCVGGYGGGAPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVSLVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAK-----------------------------ATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKV 1578 LK+AITELHKPPATSSASA VPKATEKVTKKPGRILITVDVQELGNIELE KYMTRGATWSPS CTYYGMVTQSTTEDW+GVSLRLSTAEPTVHGTPPALE KTVSLK YRMPEPSF+KPRGAM RKKSGA SRRSSFGSVGECEEDGE SSLDDTMSAALCV GYGGGAPG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVS VVETPADIKSNA+AKKLTVGVLQLSAEVSHY+VPAKESAAYLQAK ATNNTDYLLLASNDVSIFFDNSF+TKTSLTSV PGESFQTFLGIDPAVK+ Sbjct: 12 LKEAITELHKPPATSSASACVPKATEKVTKKPGRILITVDVQELGNIELEGLAPWVRRPLYPSFHLRDPLWKYMTRGATWSPS-------------CTYYGMVTQSTTEDWKGVSLRLSTAEPTVHGTPPALEGKTVSLKPYRMPEPSFSKPRGAMG--RKKSGAYSRRSSFGSVGECEEDGESSSLDDTMSAALCVEGYGGGAPGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVSFVVETPADIKSNARAKKLTVGVLQLSAEVSHYVVPAKESAAYLQAKEYVSTHRHQGSVPSKVKVSMLLLILHANQATNNTDYLLLASNDVSIFFDNSFITKTSLTSVCPGESFQTFLGIDPAVKI 362
BLAST of mRNA_Ecto-sp13_S_contig10159.189.1 vs. uniprot
Match: D8LRM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM9_ECTSI) HSP 1 Score: 292 bits (748), Expect = 1.280e-86 Identity = 226/608 (37.17%), Postives = 303/608 (49.84%), Query Frame = 1 Query: 49 PEVVSFSSSDAPIQAVTVFCKDKAEVTRVINFLSPSSLGRHEVELADLPHRFLINETSVRVKGSGYCTILHVSYTDEP------PMDPAEPELTQEEEDAAKDREEKRKQDIQRLTDELSVLNQQSSRNMHMREYADRFAERAVTA------------TAGGSTNAAAALGVSDNGPAPRVEDVGKALDWWAARAVQTDAEVHRLELEGRRLKDAITELHKPPATSS-----ASARVPKATEKVT---KKP-----------GRILITVDVQEL-GNIELEVKYMTRGATWSPSYDLRVDTQTDSVSCTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLK-TYRMPEPSFNKPRGAMKGMRKKSGASSRRSSFGSVGECEEDGECSS-------LDDT--------------------------------MSAALCVGGYGGGAPG--------------------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVSLVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKV 1578 P+ VSFSS DAP++ TV+ K++AE+TRV++F +G H+VEL LP I E S+ VKGSG+CTIL S++++ P+ A P +E E + +Q L ++ +VL Q R +R+ ADR ++A A GG + AAA + + + V ALDWW ++ D HR+ + G+R+ DA+++L A + A A +A+ K KP +++TVDV+EL IELEV YM+ A+W PSY LRVD T +SCTY+G V+QST EDW+GV+L+LSTAEP+ TPP L +KTVSLK T P S S AS+ SV + E ++ D T +A C GG G XX +GAV+ +E PA +K N ++ KL+V VLQLS +V HY+VP++++ A+LQA ATNNTDYLLLAS DVSIFFDNSFV KTSLTSVSPGESFQTFLGIDPAVKV Sbjct: 16 PQKVSFSSLDAPVKRATVY-KNRAEITRVVSFSPTDRVGLHKVELTGLPWNGSIEEQSLTVKGSGHCTILDASFSEDDSTVEDKPLSSATPSEKKENEQEQAKAVAALRTKMQALKEDHAVLETQLYRTEQLRQLADRVVDKATLAFEPSVGGRVSGARGGGDGDPAAAAAANAAQGSMDIASVSSALDWWESKRADIDERCHRITVHGKRVVDAMSKLDNEHAALTKHYIAAKAGGGRASAKGNFSFSKPKXXXXXXXXXXXXVVVTVDVEELLCPIELEVSYMSERASWLPSYSLRVDALTGCMSCTYFGRVSQSTNEDWEGVALKLSTAEPSARSTPPFLTTKTVSLKSTAAAPTQSXXXXX---------SHASAHLFGVTSVPGAGKTFEAAAPQAGGFMFDATPAPATAAXXXXXXXXXXXXXXXXXXXXXXAGAAAAPTCFGGAAGAXXXXXXXXXXXXXXXXXXXXXATEEGTGEEFVSSAPPXXPEAKPAVAQVEGGGVGAVTFAIEKPATVKGNGESTKLSVAVLQLSTDVVHYVVPSRDATAFLQANATNNTDYLLLASEDVSIFFDNSFVAKTSLTSVSPGESFQTFLGIDPAVKV 613
BLAST of mRNA_Ecto-sp13_S_contig10159.189.1 vs. uniprot
Match: A0A836CA38_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA38_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.890e-38 Identity = 124/359 (34.54%), Postives = 160/359 (44.57%), Query Frame = 1 Query: 727 RILITVDVQELGNIELEVKYMTRGATWSPSYDLRVDTQTDSVS--------------------------CTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLKT-YRMPEPSFNKPRGAMKGMRKKSGASSRRSSFGSVGECEEDGECSSLDDTMSAALCVGGYGGGAPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVSLVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYL------------------------------------------------QAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKV 1578 +I++++DV + G ++L +Y+T GA W+ SYD+RV T +++S YYG V Q T EDW V L LSTAEP + GTPPAL KTV + R P K R M GA + S + +AA+ GG +GAV+ + PA + S+ AKKLTVG+L+LSA+V+HY+VPA E+AAYL +AK N TDYLLLAS+DVSIFFDN FVTKTSL +VSPGE F FLG+DPAVKV Sbjct: 380 QIVVSLDVAQAGAVDLVARYVTCGARWTSSYDVRVATAHNAISRKRGGGWTSCLRSXXXXXXXXXXXXXXVYYGEVVQGTGEDWDDVRLTLSTAEPAISGTPPALAPKTVRWRAPSRRPAMMMMKTRAMPAAMDMAPGAETYGWSPTTPAFAAAPLXXXXXXXVATAAVDSGGA------------------------------------LGAVAYEIAAPASVASDFTAKKLTVGILELSADVTHYVVPALEAAAYLXXXXXXXXXXXXKVRAAREALPLAKRHVXXXXXXXXXXXXXXXXXXXXKAKVLNTTDYLLLASDDVSIFFDNRFVTKTSLRTVSPGEGFDVFLGVDPAVKV 702
BLAST of mRNA_Ecto-sp13_S_contig10159.189.1 vs. uniprot
Match: A0A7S1N9K3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N9K3_9EUGL) HSP 1 Score: 147 bits (370), Expect = 2.820e-34 Identity = 121/355 (34.08%), Postives = 173/355 (48.73%), Query Frame = 1 Query: 535 VEDVGKALDWWAARAVQTDAEVHRLELEGRRLKDAITELHKPPATSSASARVPKATEKVTKKPGRILITVDVQELGNIELEVKYMTRGATWSPSYDLRVD-----TQTDSVSCTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLKTYRMPEPSFNKPRGAMKGMRKKSGA--SSRRSSFGSVGECEEDGECSSLDDTMSAALCVGGYGGGAPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVSLVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKV 1578 ++ V K LD+ AARA DA+ R EL+ L+ A L A +A + K T + I V V G IEL++ Y+ GA W+PSYDLRV T+T ++ TYYG+V Q+T EDW GV + LST+ P GTPP ++ V K R PE + + +G R+ SG R +S G++ + S ++ V G GA G+ +L ++ + I SN + K+TV + L + H+ PA E AYLQA N+++Y LLAS+ VS+FFD SFVT ++L SPGE FLG+D ++KV Sbjct: 168 LDQVVKLLDFHAARAADNDAK--RFELQAL-LQVAEATLADAKAALAAEDMNGRRLRK-TVATRDVTIEVSVHSAGEIELQLTYLVSGAQWTPSYDLRVTSPKSATETAAMELTYYGIVKQNTGEDWNGVQVVLSTSSPGSGGTPPLPPTQLVGFKR-RSPEVTPLRALRKSRGRRRGSGGYRMERANSSGALELDTYSDDSGSGSESDEERKNVTGINMGAG--------------------------------GSATLEIQRQSTIASNDKEHKVTVAFIPLVPYLCHFTTPALEDKAYLQANTVNSSNYPLLASDRVSVFFDGSFVTTSTLRHTSPGEKIVMFLGVDTSIKV 485
BLAST of mRNA_Ecto-sp13_S_contig10159.189.1 vs. uniprot
Match: A0A7S4GFX8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GFX8_9EUGL) HSP 1 Score: 140 bits (354), Expect = 4.350e-32 Identity = 150/529 (28.36%), Postives = 232/529 (43.86%), Query Frame = 1 Query: 82 PIQAVTVFCKDKAEVTRVINFLSPSSLGRHEVELADLPHRFLINETSVRVKGSGY----CTILHVSYTDEPPMDPAEPELTQEEEDAAKDREEKRKQDIQRLTDELSVLNQQSSRNMHMREYADRFAERAVTATA-GGSTNAAAALGVSDNGPAPRV----EDVGKALDWWAARAVQTDAEVHRLELEGRRLKDAITELHKPPATSSASARVPKATEKVTKKPGRILITVDVQELGNIELEVKYMTRGATWSPSYDLRV---DTQTDSVSCTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLKTYRMPEPSFNKPRGAMKGMRKKSGASS----------RRSSFGSVGECEEDGECSSLD--------DTMSAALCVGGYGGGAPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVSLVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKV 1578 P++ VTV+C D+AEV R F P G H + + L + S+RV+G CTIL V Y E PA+ A+ +RE K + T + + Q R D + VTA G + + + AP V + V + LD+ +++ + +D L++ + AI A S R + + + + I + V G I L + Y+ +GA+W+PSYD+RV + S++ TY+G+V Q+T E+W+GV L LST+ P GTPP ++TVS K + PR +G ++S ++ R++ + CE D E S TM G GG A + ++ + I S+ + K+TV ++QL+ ++ ++ PA E AYLQA A N +++ LL S+ V+IFFD SFVT T L SPGES FLG+D VK+ Sbjct: 33 PVKHVTVYC-DRAEVERHFTFEHPEP-GLHSLVITGLTES--TDPDSIRVRGLASSKVPCTILEVQY--EVHHRPADDATA-----ASGEREAAAKAALTAATARRTAIQAQIGRLQQQ----DELVQGYVTAMLLGKPSRTQSKTTAAAEAEAPTVGTDLQAVQRLLDFHSSQGLTSDTAQAELKVHLEEAEAAIKAAEAELAHLRGSLR--RGPQLTVSRD--VTIELRVPNPGPIALSITYLVKGASWTPSYDMRVAVSEANEPSMTLTYFGVVKQNTGENWEGVQLALSTSSPATGGTPPLPPTQTVSFKPADV-------PRLFARGASRRSDSNMMIPMQARMPPRQAMMAEI--CESDDEVLSTCAPEGTMPWTTMDTTEIKNGAGGSA------------------------------------TFTIQRRSTIDSDNKEHKVTVTIIQLTPKLRYFCTPALEERAYLQANAINTSEFPLLESHRVAIFFDGSFVTTTHLKHTSPGESINVFLGVDSNVKI 497
BLAST of mRNA_Ecto-sp13_S_contig10159.189.1 vs. uniprot
Match: A0A433U952_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433U952_ELYCH) HSP 1 Score: 132 bits (331), Expect = 2.880e-29 Identity = 143/513 (27.88%), Postives = 229/513 (44.64%), Query Frame = 1 Query: 76 DAPIQAVTVFCKDKAEVTRVINFLSPSSLGRHEVELAD------LPHRFLINETSVRVKGSGYCTILHVSYTDEPPMDPAEPELTQEEEDAAKDREEKRKQDIQ--RLTDELSVLNQQSSRNMHMREYADRFAERAVTATAGGSTN----AAAALGVSDNGPAPRVEDVGKALDWWAARAVQTDAEVHRLELEGRRLKDAITELHKPPATSSASARVPKATEKVTKKPGRILITVDVQELGNIELEVKYMTRGATWSPSYDLRVDTQTDSVSCTYYGMVTQSTTEDWQGVSLRLSTAEPTVHGTPPALESKTVSLKTYRMPEPSFNKPRGAMKGMRKKSGASSRRSSFGSVGECEEDGECSSLDDTMSAALCVGGYGGGAPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGAVSLVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKV 1578 D P+ VTV+ D+AEV R RHE +L + H +E S+RV+G G TI VS+ + D EP + EEE A KD EK +++ + +L VL +Q ++ DRFA A + G S A GV D + +D+G+ LD + ++E +R DA+T K + A ++ +I ++ +E N+ L + Y+ GA+W+P YDLR+ ++ TYYG+++QS+ EDW V + LSTAEP + G+ P L +S+ + +++ +G++ K+ A R+S S +D M +CV + + + + P+ I S+A K+TV L +S+ VP+K + A+L+AK N + Y+LL +IF DN+ V K L+SV+P E F+ LG+DP V+V Sbjct: 16 DCPMTKVTVYT-DRAEVCR-----------RHECKLKSGKNELHVTHFVEADEDSIRVEGHGKATIAEVSFQSKQNKD-KEPAMM-EEEKALKDEIEKLTAELKEGQFESQLCVLGKQ-------KDILDRFANTASSPGQGSSNESFLKAEYFQGVRDF--LHQYKDLGRQLD------------TEKFDVENKR--DALT---KKITDTQQKLEQLLADRNSGREKKECIIVLEAEEETNVTLAISYIVYGASWTPLYDLRMFPVEGTLKITYYGVISQSSGEDWTDVQVSLSTAEPVLGGSIPILAQTQLSVAAPVQAQANYS-----WRGLKAKASAPRMRAS-------------SHMDAPMMQ-MCV-----------------MEDSCMEYREPLNVDTLKITEGLTSATYEIARPSTIPSDASPHKVTVATLDTKPTLSYLTVPSKVAHAFLKAKVVNTSSYILLP-GPTNIFLDNTSVGKAHLSSVAPQEEFECSLGVDPGVRV 451 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10159.189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10159.189.1 >prot_Ecto-sp13_S_contig10159.189.1 ID=prot_Ecto-sp13_S_contig10159.189.1|Name=mRNA_Ecto-sp13_S_contig10159.189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=526bp MATETAPPPSASGADTPEVVSFSSSDAPIQAVTVFCKDKAEVTRVINFLSback to top mRNA from alignment at Ecto-sp13_S_contig10159:513..5971+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10159.189.1 ID=mRNA_Ecto-sp13_S_contig10159.189.1|Name=mRNA_Ecto-sp13_S_contig10159.189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5459bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10159:513..5971+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10159:513..5971+ >mRNA_Ecto-sp13_S_contig10159.189.1 ID=mRNA_Ecto-sp13_S_contig10159.189.1|Name=mRNA_Ecto-sp13_S_contig10159.189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1578bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10159:513..5971+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |