Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 423 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 300 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462511.562457-UTR-Ecto-sp13_S_contig10157:3861..3905 | 1681462511.562457-UTR-Ecto-sp13_S_contig10157:3861..3905 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10157 3862..3905 + |
| 1681462511.5896595-UTR-Ecto-sp13_S_contig10157:4205..4284 | 1681462511.5896595-UTR-Ecto-sp13_S_contig10157:4205..4284 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10157 4206..4284 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462511.578586-CDS-Ecto-sp13_S_contig10157:3905..4205 | 1681462511.578586-CDS-Ecto-sp13_S_contig10157:3905..4205 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10157 3906..4205 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10157.186.1 >prot_Ecto-sp13_S_contig10157.186.1 ID=prot_Ecto-sp13_S_contig10157.186.1|Name=mRNA_Ecto-sp13_S_contig10157.186.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp
MKGGKTPVGWQQIVPGGACQPANTEARFSLFPYTARVRGKKETNNKNGIS
TRCTNALSSFAAYFLPLLKDGLPGPTVDKPTVSKEGILSVKGQNSYFTR* back to topmRNA from alignment at Ecto-sp13_S_contig10157:3862..4284+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10157.186.1 ID=mRNA_Ecto-sp13_S_contig10157.186.1|Name=mRNA_Ecto-sp13_S_contig10157.186.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=423bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10157:3862..4284+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTCCCGGGCGGGGGGGGCGTAGCGTACGGGTCACTTAACAACAAATGAAG
GGGGGTAAAACGCCTGTAGGATGGCAACAGATAGTTCCGGGGGGAGCGTG
TCAACCGGCCAACACTGAAGCCCGATTCTCACTTTTTCCGTACACAGCCC
GCGTTAGAGGGAAGAAGGAGACCAACAACAAGAACGGCATCAGCACCAGG
TGTACCAATGCACTATCTTCTTTCGCAGCTTATTTTCTACCGCTGCTCAA
AGACGGCCTGCCTGGCCCAACGGTGGACAAGCCTACGGTCAGTAAAGAAG
GTATACTTTCTGTGAAAGGACAAAACTCATACTTCACACGCTAGACACCG
CGACAAGTTTCAAGATGACAGAAAAAGAAAGCAGGAATACCAACACGTGC
GTACGTCGCCTTTCCGCTGGATA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10157:3862..4284+ >mRNA_Ecto-sp13_S_contig10157.186.1 ID=mRNA_Ecto-sp13_S_contig10157.186.1|Name=mRNA_Ecto-sp13_S_contig10157.186.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=300bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10157:3862..4284+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGGGGGGTAAAACGCCTGTAGGATGGCAACAGATAGTTCCGGGGGG
AGCGTGTCAACCGGCCAACACTGAAGCCCGATTCTCACTTTTTCCGTACA
CAGCCCGCGTTAGAGGGAAGAAGGAGACCAACAACAAGAACGGCATCAGC
ACCAGGTGTACCAATGCACTATCTTCTTTCGCAGCTTATTTTCTACCGCT
GCTCAAAGACGGCCTGCCTGGCCCAACGGTGGACAAGCCTACGGTCAGTA
AAGAAGGTATACTTTCTGTGAAAGGACAAAACTCATACTTCACACGCTAG back to top
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