mRNA_Ecto-sp13_S_contig10150.177.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: D7FQR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR4_ECTSI) HSP 1 Score: 414 bits (1063), Expect = 2.400e-144 Identity = 215/225 (95.56%), Postives = 220/225 (97.78%), Query Frame = 1 Query: 1 MNGGRFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFHR 675 MNGGRFLLLVTG+SRGFGRCVAEEFVRQVAPANPVDL+LVARSETGLESATDSVNEIAASI APGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVL+NNAGSLGHIGVAS LPSLAAFRSEMDFNITSALWLSSRF+AVFGAKRPNLSSGNSVEGTLGE GADVDKNGATT +TASADTVHDVSNNIVVNISSLAALQPF TWGGYSSGKAARDMFHR Sbjct: 6 MNGGRFLLLVTGASRGFGRCVAEEFVRQVAPANPVDLVLVARSETGLESATDSVNEIAASINAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLVNNAGSLGHIGVASALPSLAAFRSEMDFNITSALWLSSRFSAVFGAKRPNLSSGNSVEGTLGESGADVDKNGATTAATASADTVHDVSNNIVVNISSLAALQPFETWGGYSSGKAARDMFHR 230
BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: A0A836CM32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM32_9STRA) HSP 1 Score: 122 bits (306), Expect = 7.270e-30 Identity = 88/250 (35.20%), Postives = 121/250 (48.40%), Query Frame = 1 Query: 1 MNGGRFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGG--VVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSN------------------------NIVVNISSLAALQPFVTWGGYSSGKAARDMFH 672 M+G +L++VTG+SRG GRC+A+E VR + + + L+L+ARSE+GL E AASI V + +P+DLG+L LE +L+ FS +D Y R VL NNAGSLG + A +L S A R +D NITSA+W++ F + + ++VVNISSLAA++PF TW Y +GKAARDMFH Sbjct: 1 MSGLPWLVIVTGASRGLGRCLAQEAVRSIGKDHRMTLLLMARSESGLM-------ETAASIRGMNSEDVTIEVQPVDLGNLSTLETSLQNAFSGLDARHYQRCVLFNNAGSLGELAPAMDL-SFAGLREAVDLNITSAMWVTCAFVNLILPRWQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMPDVVVNISSLAAVKPFPTWAAYCAGKAARDMFH 242
BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: A0A7S4W3N7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W3N7_9STRA) HSP 1 Score: 117 bits (293), Expect = 6.650e-28 Identity = 80/237 (33.76%), Postives = 121/237 (51.05%), Query Frame = 1 Query: 13 RFLLLVTGSSRGFGRCVAEEFVRQ---VAPANPVDLILVARSETGL--------ESATDSVNEIAASIGAPGGVV-VRKEPLDLGDLDHLEANLEGVF-----SRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFH 672 R +++VTG+SRG GR +A FV++ +P+ ++L+ARSE GL + A ++ A A ++ + +DL DLD+L+ NL + S+ + + +A+L+NNAGSLGH+G + SL ++ +DFNITS+LW+S+RF F + +V VVNISSL A++PF T G Y +GKAARDMFH Sbjct: 40 RTVVIVTGASRGLGRAIALSFVKEEKTFQKFSPLRILLLARSEEGLVGTKSLMQQEADKFLDTTANDNDATSDLLDMTHHVIDLSDLDNLDDNLNDILDFSSSSKNNLPPFEKAILINNAGSLGHLGPCMNMTSLKELQTSLDFNITSSLWVSTRFVRSFSQQXXXXXXXKTV----------------------------------VVNISSLCAIEPFKTMGVYCTGKAARDMFH 242
BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: A0A8K1FK79_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK79_PYTOL) HSP 1 Score: 115 bits (289), Expect = 1.090e-27 Identity = 75/223 (33.63%), Postives = 109/223 (48.88%), Query Frame = 1 Query: 13 RFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIG--APGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFHR 675 R +++TG+SRGFGRC+A +F R++ A VD+ L+AR E L V E AS A + + +DLGD + + ++ T Y R L++NAGS+G + ELPS A +FN+ S +W + RF V+GA R L S + + +VNISS A++PF T+G Y +GKAAR+M HR Sbjct: 2 RSAVVITGASRGFGRCLALDFTREIT-AGDVDMFLLARHEGDLGETVRLVTEAWASKANAAESKLQTFVKTVDLGDQVDYVTKFDAILEQLQATAYDRVYLVHNAGSIGDLCFTQELPSPAELAQYWEFNVNSVVWFNKRFLDVYGATREELLSDAPLSASY---------------------------QAFIVNISSGCAIKPFKTYGMYCTGKAAREMHHR 196
BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: W7U863_9STRA (Sepiapterin reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U863_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.670e-27 Identity = 84/235 (35.74%), Postives = 119/235 (50.64%), Query Frame = 1 Query: 4 NGGRFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPT------------RYSRAVLLNNAGSLGHIGVASEL-PSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMF 669 +G RFL+ +TG+SRGFGRC+A E R+ PA VD+ L+AR+ L + + E + S + GV V P DLG+L+ LE N +F+ +D +Y L NNAGS+G I A +L L A R +D N+TS++ ++S F F LSS ++ L ++NISS+AA+QPF +WG Y +GKAARDMF Sbjct: 5 SGTRFLVFITGASRGFGRCLALEAARKWGPA--VDMHLIARNAEALTAVKRDI-EASLSDQSKIGVRVWTWPFDLGNLETLEPNFARIFATVDEFSAEQESTAMIMHKYGNVYLFNNAGSVGPIAYAKDLCTDLPALRQSLDLNLTSSILITSLFLRRF----CTLSSPSNKVPAL-----------------------------FIINISSMAAIQPFHSWGVYCAGKAARDMF 203
BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: K3WFV0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFV0_GLOUD) HSP 1 Score: 108 bits (271), Expect = 4.240e-25 Identity = 66/218 (30.28%), Postives = 105/218 (48.17%), Query Frame = 1 Query: 22 LLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFHR 675 +L+TG+SRGFGRCVA +F +Q++ + +D+ L ARSE L+ V + + +DLG+ D ++ + ++I Y+R +++NAGSLGH+G+ E S FN+ S LW + RF FGA R L A+ + +++VN++SL +QP T+G Y K AR+M H+ Sbjct: 5 VLITGASRGFGRCVAVDFAQQISAGDDLDIHLWARSEADLKETERMVQDAWERTHPSHTLRTFTLTVDLGNKDDYTPKIDALLAQIKAESYARVFVVHNAGSLGHLGLTQEWSSHEMLDQYWHFNVHSVLWFNKRFLEEFGASREELQK--------------------------PAEAAQPPTLSVIVNVTSLFGIQPAATFGLYCLSKGAREMHHK 196
BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: A0A080ZH75_PHYPR (Sepiapterin reductase n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A080ZH75_PHYPR) HSP 1 Score: 106 bits (265), Expect = 8.440e-25 Identity = 70/220 (31.82%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 22 LLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTR-YSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVV-NISSLAALQPFVTWGGYSSGKAARDMFHR 675 +LVTG+SRGFGRC+A +F R++ ++ +DL L AR E GL+ + V E S+ + + +P+DL + L+ + +++ Y R L++NAG+LG +G A E PS + + N+TS +WL+ RF VFGA R +++ V D + +V+ N+SS +A+ P+ T Y + KAAR+M R Sbjct: 5 VLVTGASRGFGRCLALDFARELVSSD-LDLFLWARDENGLKETSRLVREARDSLQQAEDLHIFIQPVDLRNSADYTKKLDDLLAQLTTAAPYDRVFLVHNAGALGGLGFAQECPSPSEMARHFELNVTSVMWLNKRFLDVFGASRRDITKLP----------------------------VSDTTTKLVIFNVSSRSAIAPYPTLSQYCTAKAAREMHFR 195
BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: H3H918_PHYRM (Sepiapterin reductase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H918_PHYRM) HSP 1 Score: 106 bits (265), Expect = 3.440e-24 Identity = 77/219 (35.16%), Postives = 110/219 (50.23%), Query Frame = 1 Query: 22 LLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEM-DFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFHR 675 +LVTG+SRGFGRC+ +FVR++ N VDL L ARSE L+ A G + + +DL D ++ V ++ Y R L++NAGS G +G+A E S ++ + N+TS LWL+ RF V+GA R L T+TS + + H V +VNI+SL ++PF T Y +GKAAR+M HR Sbjct: 6 VLVTGASRGFGRCLTLDFVRELKTQN-VDLHLWARSEEDLQETERLARVEWQKAAATGELRCFLQCVDLSDAADYTHKVDHVLLQLAAQSYGRVFLVHNAGSQGQLGLAQECASSPTELAQYWELNVTSVLWLNKRFLDVYGASREEL---------------------LTSTSVSEEKSTHLV----IVNITSLCGIEPFKTHMMYCTGKAAREMHHR 198
BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: W2PPJ8_PHYPN (Sepiapterin reductase n=7 Tax=Phytophthora TaxID=4783 RepID=W2PPJ8_PHYPN) HSP 1 Score: 106 bits (265), Expect = 3.640e-24 Identity = 70/220 (31.82%), Postives = 112/220 (50.91%), Query Frame = 1 Query: 22 LLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTR-YSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVV-NISSLAALQPFVTWGGYSSGKAARDMFHR 675 +LVTG+SRGFGRC+A +F R++ ++ +DL L AR E GL+ + V E S+ + + +P+DL D L+ + ++ Y R L++NAG+LG +G A E PS + + N++S +WL+ RF VFGA R +++ V D + +V+ N+SS +A+ P+ T Y + KAAR+M R Sbjct: 5 VLVTGASRGFGRCLALDFARELVSSD-LDLFLWARDENGLKETSRLVREARDSLQQTEDLHIFIQPVDLRDSADYTKKLDDLLGQLTTAAPYDRVFLVHNAGALGGLGFAQECPSPSEMARHFELNVSSVMWLNKRFLDVFGASRRDITKLP----------------------------VSDTTTKLVIFNVSSRSAIAPYPTLSQYCTAKAAREMHFR 195
BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: A0A8K1CF97_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CF97_PYTOL) HSP 1 Score: 106 bits (264), Expect = 5.180e-24 Identity = 70/221 (31.67%), Postives = 110/221 (49.77%), Query Frame = 1 Query: 13 RFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFHR 675 R ++++TG+SRG+GRC+A +F R++ + VD+ L AR E L V+E A + G + V + +DL +E + ++ Y + L++NAGSLG +G +EL S A + + N+ S +W + RF VFGA R L + +V + ++NISSL A++PF T G Y +GKAAR+M R Sbjct: 2 RSVVVITGASRGYGRCLALDFAREIEQGD-VDMYLWARHEADLAETKRLVHE--AWQQSKGALDVATQVVDLSLQADYVPKIETLIVQLQSKSYEQVFLVHNAGSLGDLGYTNELSSPAQLSAYWELNVNSVVWFNKRFLDVFGATREELVASTAVS-------------------------TKPATQATIINISSLCAIEPFATQGLYCTGKAAREMHFR 194 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10150.177.1 >prot_Ecto-sp13_S_contig10150.177.1 ID=prot_Ecto-sp13_S_contig10150.177.1|Name=mRNA_Ecto-sp13_S_contig10150.177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp MNGGRFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESAback to top mRNA from alignment at Ecto-sp13_S_contig10150:60..1162- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10150.177.1 ID=mRNA_Ecto-sp13_S_contig10150.177.1|Name=mRNA_Ecto-sp13_S_contig10150.177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1103bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10150:60..1162- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10150:60..1162- >mRNA_Ecto-sp13_S_contig10150.177.1 ID=mRNA_Ecto-sp13_S_contig10150.177.1|Name=mRNA_Ecto-sp13_S_contig10150.177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=675bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10150:60..1162- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |