mRNA_Ecto-sp13_S_contig10149.175.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10149.175.1 vs. uniprot
Match: D7FIE2_ECTSI (Abhydrolase domain-containing protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIE2_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 2.590e-140 Identity = 283/336 (84.23%), Postives = 288/336 (85.71%), Query Frame = 1 Query: 1 QVTVKNYRKFKVLETLTAEADASVTGGRSSGPIRNSSSCFSDDGGIGVERSSSSSTAEEPLRPSTGPMRTRKKLR-----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAGSGASGGLVDAQMTPTTAAVETVASRGADEVFHTASLLDFGSGKEGEVAVPAGAGPGAGATSGLVTAKEMAAMKDPSAFHEALTLPFTGDSSVDAYFQRIGRVMGQDVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWFDGLGAGSWLDRATGNFLSSALELSKEPAAARATADHGASPIAEASTRTS--EAAESR 987 +VTVKNYRKFKVLETLTAEAD SV GGRSSGPIRNSS C SDD G+GV SSSS+TAEEPLRPSTGPMRTRKKLR S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LVD + T TA E VASR DEVFHTASLLD G GK EV +PAGAGPGAGATSGLVTAKEMAAMKDPSAFHEALTLPFTGDSSVDAYFQRIGRVMGQ VSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWFDGLGAGSWLDRATGNFLSSALELSKE AA ATAD GASP AEAST T AAESR Sbjct: 323 KVTVKNYRKFKVLETLTAEADVSVPGGRSSGPIRNSSFCSSDDEGMGVGPSSSSATAEEPLRPSTGPMRTRKKLRPASAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVDGETTQGTATAEAVASRRGDEVFHTASLLDSGHGKGREVGMPAGAGPGAGATSGLVTAKEMAAMKDPSAFHEALTLPFTGDSSVDAYFQRIGRVMGQGVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWFDGLGAGSWLDRATGNFLSSALELSKESTAAGATADRGASPTAEASTSTRILAAAESR 658
BLAST of mRNA_Ecto-sp13_S_contig10149.175.1 vs. uniprot
Match: A0A6H5JJN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN0_9PHAE) HSP 1 Score: 134 bits (336), Expect = 1.700e-35 Identity = 75/92 (81.52%), Postives = 76/92 (82.61%), Query Frame = 1 Query: 721 LCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWF---DGLGAGSWLDRATGNFLSSALELSKEPAAARATADHGASPIAEASTRTSEAAESR 987 L P WVGALEAAAKSDGIVVAIT+HGGHCGWF DGLGAGSWLDRAT NFLSSA ELSKEP A TADHGAS AEASTR SEAAESR Sbjct: 20 LAPACLWVGALEAAAKSDGIVVAITKHGGHCGWFGWFDGLGAGSWLDRATKNFLSSASELSKEPKADGTTADHGASTTAEASTRISEAAESR 111
BLAST of mRNA_Ecto-sp13_S_contig10149.175.1 vs. uniprot
Match: A0A150GN41_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GN41_GONPE) HSP 1 Score: 68.9 bits (167), Expect = 3.380e-9 Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 1 Query: 538 LVTAKEMAAMKDPSAFHEALTLPFTGDSSVDAYFQRIGRVMGQDVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWFDGLGAGSWL 849 LV E+ A F AL LP G + +DAY++R + V+VP LCL A+DDP+ P A AAA + +V+A+T+ GGH GW G SW+ Sbjct: 433 LVDFNEVLACNTLHEFERALMLPICGVADLDAYYERNNCKTA--LQHVSVPLLCLSARDDPIIGPRLLRHAEAAAAANPRVVLAVTKRGGHLGWLAGWRGHSWM 534
BLAST of mRNA_Ecto-sp13_S_contig10149.175.1 vs. uniprot
Match: A0A524NIV3_9DELT (Hydrolase_4 domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524NIV3_9DELT) HSP 1 Score: 65.1 bits (157), Expect = 3.920e-8 Identity = 45/123 (36.59%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 535 GLVTAKEMAAMKDPSAFHEALTLPFTGDSSVDAYFQRIGRVMGQDVSSVTVPTLCLLAKDDPLCPP---HAWVGALEAAAKSDGIVVAITEHGGHCGWFDGLGAG-SWLDRATGNFLSSALEL 891 G+ + AA + S FH L P G +S +AYF G + V PTL + A DDP+C H +G L+ + + +A+T HGGHCG+++G AG SW DRA ++L++A L Sbjct: 248 GIAGYEACAASRSMSEFHACL-YPLAGYTSAEAYFS--GSNPMEVALDVATPTLVINAADDPVCVERNVHHHLGDLQTLPR---MTLALTRHGGHCGFYEGPLAGQSWSDRAVVDYLTAAHRL 364
BLAST of mRNA_Ecto-sp13_S_contig10149.175.1 vs. uniprot
Match: A0A2R6XT16_MARPO (AB hydrolase-1 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XT16_MARPO) HSP 1 Score: 64.3 bits (155), Expect = 1.130e-7 Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 1 Query: 622 SVDAYFQRIGRVMGQDVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWFDGLGAGS-WLDRATGNF----LSSAL 885 +VD Y++R G Q + V VP LC+ A+DDP+C A + + I++A+T+HGGH G+FDG GA S W RA F LSS+L Sbjct: 342 TVDTYYRRCGS--SQYLEGVAVPLLCVSAEDDPICTKEAI--PYDECRVNPNIILAVTKHGGHLGYFDGFGAKSIWYVRAATEFSKVLLSSSL 430
BLAST of mRNA_Ecto-sp13_S_contig10149.175.1 vs. uniprot
Match: A0A6P4Y0K7_BRABE (protein ABHD15-like isoform X1 n=2 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Y0K7_BRABE) HSP 1 Score: 62.0 bits (149), Expect = 4.810e-7 Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 1 Query: 577 SAFHEALTLPFTGDSSVDAYFQRIGRVMGQDVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWFDGLGAGSWLDRATGNFLSSALE 888 S FH+ + + G SS D Y+ + +DV V P LC+ +KDDPL P + +E +A+T+ GGHCG+F GL SW +R FL +L+ Sbjct: 329 STFHQRVHVRLNGYSSWDLYWAENEPL--RDVDEVATPLLCVSSKDDPLVPEDSI--PVELFQTYPHFFLALTQKGGHCGFFQGLFPSSWSERLAVEFLKVSLD 428
BLAST of mRNA_Ecto-sp13_S_contig10149.175.1 vs. uniprot
Match: A0A8J9VBN1_BRALA (ABHD15 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VBN1_BRALA) HSP 1 Score: 58.9 bits (141), Expect = 4.740e-6 Identity = 35/103 (33.98%), Postives = 53/103 (51.46%), Query Frame = 1 Query: 583 FHEALTLPFTGDSSVDAYFQRIGRVMGQDVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWFDGLGAGSWLDRATGNFLSSALEL 891 FH+ + + +S D Y+ + +DV V P LC+ +KDDPL P + +E +A+TE GGHCG+F GL SW +R FL +L++ Sbjct: 318 FHQRVHVKLNKYNSWDQYWAENEPL--RDVDEVATPLLCVSSKDDPLVPEESI--PIELFQTYPHFFLALTEKGGHCGFFQGLIPSSWSERLAIEFLKVSLDM 416
BLAST of mRNA_Ecto-sp13_S_contig10149.175.1 vs. uniprot
Match: A0A6P4YUZ3_BRABE (protein ABHD15-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YUZ3_BRABE) HSP 1 Score: 58.2 bits (139), Expect = 8.060e-6 Identity = 34/103 (33.01%), Postives = 54/103 (52.43%), Query Frame = 1 Query: 583 FHEALTLPFTGDSSVDAYFQRIGRVMGQDVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWFDGLGAGSWLDRATGNFLSSALEL 891 F E + G +++ Y+++ +++ V VP LC+ +KDDPL PH + E +A+TE GGHCG+F+G SW +R FL +A +L Sbjct: 288 FEEMVFCRTNGARTIEEYWEQ--NEPTREIDEVAVPLLCISSKDDPLV-PHESIPT-ELFLTYPHFFLALTEKGGHCGFFEGFQPDSWAERLAFEFLRAAQKL 386
BLAST of mRNA_Ecto-sp13_S_contig10149.175.1 vs. uniprot
Match: A0A2S5BIX5_9BASI (A/B superfamily hydrolase n=1 Tax=Rhodotorula taiwanensis TaxID=741276 RepID=A0A2S5BIX5_9BASI) HSP 1 Score: 58.2 bits (139), Expect = 8.970e-6 Identity = 39/114 (34.21%), Postives = 56/114 (49.12%), Query Frame = 1 Query: 583 FHEALTLPFTGDSSVDAYFQRIGRVMGQDVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWFDGL-GAGSWLDRATGNFLSSALELSKEPAAARAT 921 F +T P G + AY++ + + V+VP L L A +DP+ LEAA K+ +V A+T+HGGH GWF+GL W+ + FL + E P RAT Sbjct: 297 FDSLVTAPLGGHETAIAYYRSASAT--RFIDQVSVPLLSLSAMNDPVVCSGGI--PLEAATKNPNLVFALTKHGGHLGWFEGLLRPRRWIAKPVVEFLKALHEADPTPRRKRAT 406
BLAST of mRNA_Ecto-sp13_S_contig10149.175.1 vs. uniprot
Match: C3XVW5_BRAFL (C2H2-type domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XVW5_BRAFL) HSP 1 Score: 57.8 bits (138), Expect = 9.980e-6 Identity = 35/103 (33.98%), Postives = 53/103 (51.46%), Query Frame = 1 Query: 583 FHEALTLPFTGDSSVDAYFQRIGRVMGQDVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWFDGLGAGSWLDRATGNFLSSALEL 891 FH+ + + +S D Y+ + +DV V P LC+ +KDDPL P + +E +A+TE GGHCG+F GL SW +R FL +L++ Sbjct: 265 FHQRVHVELDKYNSWDQYWAENEPL--RDVDEVATPLLCISSKDDPLVPKESI--PIELFQTYPHFFLALTEKGGHCGFFQGLIPCSWSERLAVEFLKVSLDV 363 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10149.175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10149.175.1 >prot_Ecto-sp13_S_contig10149.175.1 ID=prot_Ecto-sp13_S_contig10149.175.1|Name=mRNA_Ecto-sp13_S_contig10149.175.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=329bp QVTVKNYRKFKVLETLTAEADASVTGGRSSGPIRNSSSCFSDDGGIGVERback to top mRNA from alignment at Ecto-sp13_S_contig10149:3824..5787- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10149.175.1 ID=mRNA_Ecto-sp13_S_contig10149.175.1|Name=mRNA_Ecto-sp13_S_contig10149.175.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1964bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10149:3824..5787- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10149:3824..5787- >mRNA_Ecto-sp13_S_contig10149.175.1 ID=mRNA_Ecto-sp13_S_contig10149.175.1|Name=mRNA_Ecto-sp13_S_contig10149.175.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=987bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10149:3824..5787- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |