mRNA_Ecto-sp13_S_contig10148.174.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10148.174.1
Unique NamemRNA_Ecto-sp13_S_contig10148.174.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10148.174.1 vs. uniprot
Match: D8LL55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL55_ECTSI)

HSP 1 Score: 540 bits (1390), Expect = 5.670e-186
Identity = 281/291 (96.56%), Postives = 284/291 (97.59%), Query Frame = 1
Query:   40 EKAAQKAKEAKAKAELDAARRVAEEMGMGSVGKADGIRLAAHRIKRKVAGTKTVYGGAFDNEKAAVEAAIKSRHKAKLGKVEAVVEFAFTVGVEETDAMASKQARLESQGLPSFRKMSKGLGGKDVVFLWVRKTLDSSEFITEIQITHADLSNAGYKNLKPLGFTSWGHPQLAAKIGGHPSILLWGKRDPHSDGIADIDLSYNQADEKKLADVGFKVVPGALVDCGLPDVRLWYNSIKRGAHTLPIVKAILHEIGEVRSMRKQNPGDAALMDVESKLESKLAQAREAEERK 912
            EKA QKAKEAKAKAELDAARRVAEEMGMGSVGKADGIRLAAHRIKRK+AGTKTVYGGAFDNE AAVEAAIKSRHKAKLGKVEAVVEFAFTVGVEETDAMASKQARLESQGLPS+RKMSKGLGGKDVVFLWVRKTLDSSEFITEIQITHAD SNAGYKNLKPLGFTSWGHPQLAAK+GG PSILLWGKRDPHSDGIADIDLSYNQADEKKLADVGFKVVPGALVDCGLPDVRLWYNSIKRGAHTLP VK ILHEIGEVRSMRKQNPGDA LMDVESKLESKLAQAREAEERK
Sbjct:  135 EKAVQKAKEAKAKAELDAARRVAEEMGMGSVGKADGIRLAAHRIKRKIAGTKTVYGGAFDNENAAVEAAIKSRHKAKLGKVEAVVEFAFTVGVEETDAMASKQARLESQGLPSYRKMSKGLGGKDVVFLWVRKTLDSSEFITEIQITHADPSNAGYKNLKPLGFTSWGHPQLAAKVGGQPSILLWGKRDPHSDGIADIDLSYNQADEKKLADVGFKVVPGALVDCGLPDVRLWYNSIKRGAHTLPTVKVILHEIGEVRSMRKQNPGDATLMDVESKLESKLAQAREAEERK 425          
BLAST of mRNA_Ecto-sp13_S_contig10148.174.1 vs. uniprot
Match: A0A836CC26_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC26_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.030e-47
Identity = 97/248 (39.11%), Postives = 144/248 (58.06%), Query Frame = 1
Query:  214 FDNEKAAVEAAIKSRHKAKLGKVEAVVEFAFTVGVEETDAMASKQARLESQGLPSFRKMSKGLGGKDVVFLWVRKTLDSSEFITEIQITH--------------ADLSNAGYKNLKPLGFTSWGHPQLAAKIGGH-PSILLWGKRDPHSDGIADIDLSYNQADEKKLADVGFKVVPGALVDCGLPDVRLWYNSIKRGAHTLPIVKAILHEIGEVRSMRKQNPGDAALMDVESKLESKLAQAREAEERK 912
            F  E+AA+EAAI+ +HK +LGKVE V    FT+G EET     +Q RL++ G P F K+++G+G  + V +W ++T+D  EF+T++Q+ H                      K+L+  G+  + HP L AK GG  P++++WGKRD  S GI  ++++Y+  DE +    G + +PG L + GL D  LW     RGA  +P V  + HEIGE R M    PGDA L+    +LE KLAQA+E E+++
Sbjct:  517 FQTEEAAMEAAIREKHKIRLGKVEGVSAIMFTIGNEETGRNYEEQMRLKNAGFPHFEKLARGVGRSEAVDIWQKRTIDPDEFLTQLQLAHFXXXXXXXXXXXXXXXXXXXXXKDLRKEGYDRFAHPALGAKTGGGGPTLVIWGKRDGQSSGIEGLEVAYDDKDEAQQKASGCRKIPGNLSEFGLADATLWIRFGGRGAQVIPPVNHVQHEIGEARRMLSAMPGDARLLAKLQQLEGKLAQAKEMEDKR 764          
BLAST of mRNA_Ecto-sp13_S_contig10148.174.1 vs. uniprot
Match: A0A812QS92_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QS92_SYMMI)

HSP 1 Score: 92.8 bits (229), Expect = 2.200e-17
Identity = 61/196 (31.12%), Postives = 101/196 (51.53%), Query Frame = 1
Query:  307 TVGVEETDAMASKQARLESQGLPSFRKMSKGLGGKDVVFLWVRKTLDSSEFITEIQITHADLSNAGYKNLKPLGFTSWGHPQLAAKIGGHPSILLWGKRDPHSD-GIADIDLSYNQADEKKLADVGF-KVVPG-ALVDCGLPDVRLWYNSI-KRGAHTLPIVKAILHEIGEVRSMRKQNPGDAALMDVESKLESKL 882
            T  V+E++    +   L S+G P +R M +G+G    VFLW + T +  +FIT I++ HAD S+  YK L  LG+    +P +         ++++ KRD   D  +  I +SY  ++E +    G+ K+  G +L++ G PD+ LW   + K   +    V A++ E+   R M K  PGD  + ++   LE KL
Sbjct:  322 TASVKESEQFQRQNDILASKGFPYYRMMERGIGTSGDVFLWFKMTPNPEDFITHIELAHADRSHPLYKELDRLGYEKIENPLV--------KLVIFVKRDRRRDKALKAIRVSYEASEESRFMVDGYSKISDGVSLLEFGFPDIFLWSLYMDKDDKNEAANVNALIGELKGARKMLKHRPGDKDIQNLVKMLEEKL 509          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10148.174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LL55_ECTSI5.670e-18696.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CC26_9STRA1.030e-4739.11EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A812QS92_SYMMI2.200e-1731.12Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10148contigEcto-sp13_S_contig10148:2..5803 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score543.1
Seed ortholog evalue8.2e-152
Seed eggNOG ortholog2880.D8LL55
Model size914
Hectar predicted targeting categoryother localisation
Exons8
EggNOG OGs2EV1A@1,2SX3F@2759
Cds size912
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10148.174.1prot_Ecto-sp13_S_contig10148.174.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10148 2..5801 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462510.7507193-CDS-Ecto-sp13_S_contig10148:1..401681462510.7507193-CDS-Ecto-sp13_S_contig10148:1..40Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10148 2..40 +
1681462510.7715704-CDS-Ecto-sp13_S_contig10148:1171..13271681462510.7715704-CDS-Ecto-sp13_S_contig10148:1171..1327Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10148 1172..1327 +
1681462510.7826393-CDS-Ecto-sp13_S_contig10148:2669..28221681462510.7826393-CDS-Ecto-sp13_S_contig10148:2669..2822Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10148 2670..2822 +
1681462510.793673-CDS-Ecto-sp13_S_contig10148:3134..32891681462510.793673-CDS-Ecto-sp13_S_contig10148:3134..3289Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10148 3135..3289 +
1681462510.8110685-CDS-Ecto-sp13_S_contig10148:3750..39071681462510.8110685-CDS-Ecto-sp13_S_contig10148:3750..3907Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10148 3751..3907 +
1681462510.8215303-CDS-Ecto-sp13_S_contig10148:4205..43801681462510.8215303-CDS-Ecto-sp13_S_contig10148:4205..4380Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10148 4206..4380 +
1681462510.8311055-CDS-Ecto-sp13_S_contig10148:5225..52781681462510.8311055-CDS-Ecto-sp13_S_contig10148:5225..5278Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10148 5226..5278 +
1681462510.8410947-CDS-Ecto-sp13_S_contig10148:5777..58011681462510.8410947-CDS-Ecto-sp13_S_contig10148:5777..5801Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10148 5778..5801 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10148.174.1

>prot_Ecto-sp13_S_contig10148.174.1 ID=prot_Ecto-sp13_S_contig10148.174.1|Name=mRNA_Ecto-sp13_S_contig10148.174.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp
KEQLENERQQTKKEKAAQKAKEAKAKAELDAARRVAEEMGMGSVGKADGI
RLAAHRIKRKVAGTKTVYGGAFDNEKAAVEAAIKSRHKAKLGKVEAVVEF
AFTVGVEETDAMASKQARLESQGLPSFRKMSKGLGGKDVVFLWVRKTLDS
SEFITEIQITHADLSNAGYKNLKPLGFTSWGHPQLAAKIGGHPSILLWGK
RDPHSDGIADIDLSYNQADEKKLADVGFKVVPGALVDCGLPDVRLWYNSI
KRGAHTLPIVKAILHEIGEVRSMRKQNPGDAALMDVESKLESKLAQAREA
EERK
back to top

mRNA from alignment at Ecto-sp13_S_contig10148:2..5803+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10148.174.1 ID=mRNA_Ecto-sp13_S_contig10148.174.1|Name=mRNA_Ecto-sp13_S_contig10148.174.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5802bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10148:2..5803+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGAACAGCTAGAAAACGAACGTCAACAGACAAAAAAGGTGAAGTTATT GTAGAACCATACCAAATGACCGTTGGGTGAAATGGACAAGCATTCGGATG CTTGTAAGTCCTTACAACGGTAGGTAGATGATCCGATGTTTTAGGGAAAT CGCGAGGGTCATGAAATAATCCCGTGGAAATCTGAAGCAGAAGACGGGAC CCGAACAGAGCACACCAGACAGTGTGGACTATTCCAAAGGCTTTCAGCCA TAGAAAATCATTAGCAAAAATCATTCTTTGCTTACCATCGAAACGGTCGT GATGCCTACCCGCGAAGAACACGAGACGACCTGGTCTCGTAGATCCGCCA GGGCGTTACAGTTTTCGAAAGAAGAGCAGCACCCGACACCCAAAGGCAGG TGGGTAATCATCAGATCAACACTTCTAGTTTGGGGCGCACCTCGATGTTT TTCGACTGAGCTCCTCAGCAAAGTGATGGACATGCGCTCACAGATAGCGC GACCTCCTACCCTAACATACCAACCGGTAGGCAAACCGGCAGGTGGCTCA AGCAAAATTCACTCGAGTGGAATCGCCAGCCGCCGGCTACACCCCTCCAT ACTGTCTCGAACAACCTCTTGGTAGGGTGGCGGGGTGAACAACCAGTCCG ACACTACCGTAGGAGAAATCAAACTCTGTCGACCAATCTCAAGGCTGCAT CAACACAGGATCTGCAAAACGTCTTGTTGAGGACACGAGTCTGCGTTCCC AGCCCGCGACAGTTGGGTGGGGCGCGAGAGCCATCACGCGGGGTGAATGA ATTGCCCACAGAATATTAAGCGTTGAGCCTTCCTAAGTGTCAGAATCTAC CTTCACGCATGCGACAGAGAAGAGGCCATGCTCCAAGCGACGGACGCAAG CGCGAAAAAGAAAAATGGAACGATCCCGCCATTGAAAACAGTGACGCAAA GTGATCTTACTGGAGACAGGTGGGAACAACCGAGCACAACATACTTTACA CCATTGCTTACAGACCGAATGAATATCACCTTTCAGACTAAAACAGTCGG ACAATCGCGCAAGATGCCGCAAAAGCACTGCCCCCGCGATATCAAGATTT TGAACCCGCCTTGTTCTGCTGCTGTCGTCGTGTGGTTGTTCGCTCTTTTC CTTGGTACTGCTGCTTGCAGGAGAAAGCTGCTCAGAAAGCTAAAGAAGCC AAGGCAAAGGCAGAGTTGGATGCAGCCAGACGGGTGGCGGAGGAGATGGG CATGGGTAGCGTGGGCAAGGCTGATGGCATCAGGCTAGCCGCACACCGAA TCAAGAGGAAAGTCGCTGGGACGAAGGTGCGACACAAGTTTTTGGGTCTT CTAGCTCACTCTCTATACTGTGAACTTCGTCCTTTTGGGTGCAGGGTTTG GGGTTTCGGGCTTGGTGGGACGGGTGTGGGTGGAAACCTACGGATCCCCC CACCGATCAAGTGCTTCTCGAATTGGAACTTCCTCTTGTTTGTATATGTA CTGTAAGTTATCCAGAAGCTCTGGCCTTGGCACTTCAGTCCTTCATGCCG AACATGGTTATTGTAAGTGGTTGATGCGTCTCTTCCGGCTGCTTTGAACA AGGGAGGAATGGTTTGCACTTTATCCCCCTTTTTCGACCTTCAATCGGAC ATTGATCAGCCGACATATAGCGCGAATGGGATAAATATGATAAAGCAGAA AAAGCTCCCCCACGAACGGTATGGTGGTTGGCTAGCAACGTCAGGAACAC AAAAGCAGGATGAGGCAGGAAACGCTTTCCACAAAATGAAGAACTCATTG TTCCGATTCGAAACGTAGGTCACAAAACATTCTTGAAGATTCAGGATTAT CAGGAACTTTAGTCGCACCCCCTACCGCTGGGAACGTTCGATGCCGGCTA TGATCTCATCGGCTAGGCCAAGCTCACTTCACCCCGCGCAGGGTTGTATA GGGCTTAAAACATCAAATTGAATCCAAGCAAGGAACAAACAGCCACGTGC ACCCTGCAAAACAGTGCGCTCTGTGTGTTGAATTTCACCCGTGGGAACAT CGATAACTGATACCAACGGTACCGTTCTAGGATATGCGACGGTCAAGGGT TTCATGCTAGACCTCCTCCTGGTCGCAGTGAGCGTACGTTTAGCGCCACA CTTCGCGTAGGGGTTAGCATACCGTCGTCTCACCATGAAATTTAAAGATA GCACGATGTCAACAAAGCACATCCAACTTTACACTACATTAATAACATAG CACAATATTGGTTGATGATGGCCGGAATGGCTTCGGTTGAAGGGAATAAA TGTCATGCGAGGGTTGACATTCATTGAAACTTTCAGATACATTCAGTCAC CAGAGATCTATCCGATACCATCGGTGATTGCATGGATGACACCATTCGGG TTTCATTGTGTTTGGTCGAAACTCTCCGACAGGAACACTTCCAACCTCGC AAGGATCGATTCCTACACACCTTACAGCTTGGTGTTGGTTGTTTCCAATG ACAATGACACATTCACCGAGCTACGATGATGATGGGATATCACTGCTACC CTTCCTTTCCATGCTCCCGTACATCGAAACTTCAGTTCTTGTCTCAACAT GTCACATAGACGCTACCAATCCGCGACGTGTCCTAACGTGAGCACGTCGA CGTATTGGGAATGTCCAGACGGTGTACGGAGGGGCGTTCGACAATGAGAA GGCGGCTGTGGAAGCTGCCATCAAAAGTAGGCACAAGGCCAAGCTGGGCA AAGTCGAAGCAGTCGTCGAATTCGCCTTCACAGTCGGCGTGGAGGAGACC GATGCCATGGCCTCCAAACAGGTGTTTGGAACACATTGTGTCGTCGTCGT TTTCATGCTTGCTCCTTGTTGCTGTAGCTGTCCTCGTGGTCGAAATTCTT ATCCCTAACGGTTCGACAACCAGTGGAGGCAAACATCGTCGTACCGCAAC CGCACACCGAGGGTGCGGCTTTCAGTCTCGACGAACACATCGTGACTTCA TCTGCACCATGGATTACTGAAGAGGAACCACCAGGCAGACATAGGGTCGC ACGTACGGGAAACATCCTCCATGTGCACCATGAAAGCCCTGCCCCAATGC ACCGTTCTCCTACCTGCGGCACCTTACGAACAGGCCAGGCTTGAATCGCA AGGGTTACCCAGCTTTCGAAAGATGTCCAAAGGGCTCGGCGGTAAAGACG TCGTGTTTTTGTGGGTCAGAAAGACGCTCGACTCATCAGAGTTCATCACC GAGATACAGATCACGCACGCGGATCTCTCAAACGCCGGGTGGGTGTGTGG CCACTTTTTTGAAGATTCTAAGTTCGGAATTCCTTAGGTGCACTCTTTGG CAGTATGGACGCATGCTTTGTGCACTTTTGTAAGCTTGGGCTCGACAGTA CAGGCTAGTCGCTAGGTACGACAACACGCGAGAAGAAGCCACAACGGTTG AGTTACTCATGGTTTTCCTCACCGTCAGAACAGTGCCAGGCTGCACTGAA CACACCCAAAACAGATATATACCTCGGATCCATGCCACGAAGGCAAGGCT TGTTGATGATCGGTCGGCACACACCCGGTGTCTGTAACCCGTTTGTCTGG TGAAAGGATACGACGATGAATTCCCCACCTTTGTACCGAAGTGTATCTTC CAGGTGAACGCATGTTTATCATTTCGTAATTTGAGACAGGCCTTTTTTCT CAAGTTTCGTTGAACGCGGCGACGTCGCTTTTTCCCGCGCTTGCCCCAGC TACAAGAACTTGAAGCCACTCGGGTTCACGTCTTGGGGTCATCCACAGCT GGCGGCGAAGATTGGCGGGCACCCAAGCATTTTGCTGTGGGGCAAGAGGG ACCCACACAGTGATGGCATCGCGGACATCGACCTGTCGTACAACCAAGCA GACGAGGTACAAAGCTCGAGACTCAAGGGTTCAGTGCCGGGTGTTCGTTA TAGTATCTGCATTCTGCTCCTCGGTCGGATACTTTAGTTGTTGATGAGGA CGTCCCATCCATGGCCCCGACTTCTACAATACAGGGTATAGACGTTGGTT GGCCTTGCTTTGAGTAGAGAGACACAAATGCACGTCACACATCCAGAACC GCAGAGACTGCGCCAAGAATCTGCCGGCATATTGGGAGATATGACGCCGA ACCTGACTCGCATGCACGTGTCTTGTTTGTGATTATCGGCGTTCAACAAC ACAGAAAAAACTGGCGGACGTGGGCTTCAAGGTGGTGCCGGGTGCATTGG TAGATTGCGGTCTTCCCGATGTCCGACTTTGGTACAACAGCATCAAGCGC GGCGCCCATACACTCCCCATCGTCAAGGCTATCCTCCACGAAATTGGCGA GGTTCGAAGCATGCGCAAGCAGAATCCAGGTGAGAGGCAAAAGCATGCCG CTTCGCTGGAGTCACCTAGAAAGCAACTCCGTAAACCACGATCATGCCCA GTGGTGTTTTGCAGTACCTCTCTTTGGTGCCCGAGAATGGGCAAAAGGGG ACGGTTTACGGTTGTTTCGGAGTTTCTACTCTACAGCTTCAACTTGGCTG AGCCCGGGCTTTCGGAAACAACAGCGTAGATGCGCTACGTTGTGCGGAAG TCTCGCACTGTGGATTTAATACCTGTTTGGTGAAGGACAGAGCATTGCAT ATACCAAGAATACGGTGCTGCCGGTTCTGACGGAGCCTTGTAGTGAGATG GCTAGCGGCCAGGAGTACCCTTTGATTGGAGGGTTAGACCGTCCAACAAC AGCCTCTTCGCGAGTCTTCAGTTGTAGTCCCCAATCTTACTCCAGGCTTC GATAGCCTTGCCATGTATATGCTCGAATGGACCATTGTACGCAGTGTTTC ACGCAGCTTGCGAGGGCGTACGAACTTGCTTGATGTGCTGAAGAGCTTTC AGGGAACTAGTCATAATTGCGGGTCACGGCACCAGGGTCGTGACTGGCAT GGTTTGACATAAATTTTAGCGCCTAGAACGCGGGAGATCGTTTGCCCATT TTCAGGCTATCCTGTGCGAGAGCACAGATGGTCTTGGCCGCAGAATCGGC ATGGGTGCAAGGATAAATGTATTTCTACGGCTGGTTCTTGAGCGCTAAGA CTAGAGAAGCTGAACCCGGGCAGTCGCTTCGGCGTATTTCGAAGATTGCC CATTTCGTGAAGATTGCCCATTTCGTGAAGATTCAAGATCGTGAAACGCT CTCATATGTCTGTGCCTACTGCAGGCGATGCAGCGCTTATGGACGTCGAG TCCAAGTTGGAGTCCAAGCTTGCCCAGGTGAGTGGACCCCAAACCATAGC AGCGTACACACCGAATGCTTCTATGGTAAATGACAAACGCAACTCATTCA TGTTGCCATTGCCCAGGTTTTCTAGGAATGTTGGCTTTCGTGGCGAGTTG TCGTTGTTTTGGGTGGTACAGCGACGTTTGGAAGAATTTTGGATAACTTC GACCTTACGGAAGGCTGAACCCAGCGGGACGGGGTCGGCTATGAAAAGGA GCTGACACGTGCAATGATCACAAAGAACCATTTCTGCAAGCTCGGGATCC TATTCAGTGTTCCTTGATCGTCAGCACATAACTCGTAAGAGAGGAAGCCG CCGCAACACGTTCCGCCTGAATTTCTCTGCCGTACTAGACCGTGAAACAG TTGGATTATCCAGAACCCGCTCACGTCGTTCAAGCGATGCATTAAAACAG TGCCGAAACAACACGAAATACCAGCAACCGTAACCCCGCCTCCGACTCCG CTGCCGGCATTGTTGGAGAATTGCAGGCACGCGAGGCAGAAGAGAGAAAA GC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10148:2..5803+

>mRNA_Ecto-sp13_S_contig10148.174.1 ID=mRNA_Ecto-sp13_S_contig10148.174.1|Name=mRNA_Ecto-sp13_S_contig10148.174.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=912bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10148:2..5803+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGAACAGCTAGAAAACGAACGTCAACAGACAAAAAAGGAGAAAGCTGC
TCAGAAAGCTAAAGAAGCCAAGGCAAAGGCAGAGTTGGATGCAGCCAGAC
GGGTGGCGGAGGAGATGGGCATGGGTAGCGTGGGCAAGGCTGATGGCATC
AGGCTAGCCGCACACCGAATCAAGAGGAAAGTCGCTGGGACGAAGACGGT
GTACGGAGGGGCGTTCGACAATGAGAAGGCGGCTGTGGAAGCTGCCATCA
AAAGTAGGCACAAGGCCAAGCTGGGCAAAGTCGAAGCAGTCGTCGAATTC
GCCTTCACAGTCGGCGTGGAGGAGACCGATGCCATGGCCTCCAAACAGGC
CAGGCTTGAATCGCAAGGGTTACCCAGCTTTCGAAAGATGTCCAAAGGGC
TCGGCGGTAAAGACGTCGTGTTTTTGTGGGTCAGAAAGACGCTCGACTCA
TCAGAGTTCATCACCGAGATACAGATCACGCACGCGGATCTCTCAAACGC
CGGCTACAAGAACTTGAAGCCACTCGGGTTCACGTCTTGGGGTCATCCAC
AGCTGGCGGCGAAGATTGGCGGGCACCCAAGCATTTTGCTGTGGGGCAAG
AGGGACCCACACAGTGATGGCATCGCGGACATCGACCTGTCGTACAACCA
AGCAGACGAGAAAAAACTGGCGGACGTGGGCTTCAAGGTGGTGCCGGGTG
CATTGGTAGATTGCGGTCTTCCCGATGTCCGACTTTGGTACAACAGCATC
AAGCGCGGCGCCCATACACTCCCCATCGTCAAGGCTATCCTCCACGAAAT
TGGCGAGGTTCGAAGCATGCGCAAGCAGAATCCAGGCGATGCAGCGCTTA
TGGACGTCGAGTCCAAGTTGGAGTCCAAGCTTGCCCAGGCACGCGAGGCA
GAAGAGAGAAAA
back to top