mRNA_Ecto-sp13_S_contig10143.170.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10143.170.1 vs. uniprot
Match: A0A6H5JJV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV9_9PHAE) HSP 1 Score: 871 bits (2250), Expect = 3.380e-307 Identity = 444/464 (95.69%), Postives = 453/464 (97.63%), Query Frame = 1 Query: 181 QARSGERVVINVETGEEELQXXXXXXXXXX--VDGTVAVARAGEWGALERGFSRLLSSVRREREGAGQRRGGADADGXXXXXXXXXGEEKTSAAWRVTASLYEEVTWAHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSPLVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLDSPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEV 1566 QARSGERVVINVETG+EELQ XXXXXXXX VDGTVAVARAGEWGAL+RGFSRLLSSVRRER+GAG+RRGGADADG XXXXXX GEE+TSAAWRVTASLYEEVTWAHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGE WS VSP+VVQGLLGLSVQQVCCGGQHAAVLTDCG+IFTWGRGGFGRLGHGNREGL+SPRRI+ALEGIPC QVACGFAYTAAVTASGELYTWGAGENGRLGLGDV DRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEV Sbjct: 498 QARSGERVVINVETGQEELQPQXXXXXXXXEEVDGTVAVARAGEWGALDRGFSRLLSSVRRERKGAGRRRGGADADGTRXXXXXXNGEEETSAAWRVTASLYEEVTWAHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGERWSGVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGDIFTWGRGGFGRLGHGNREGLESPRRIQALEGIPCAQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVVDRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEV 961
BLAST of mRNA_Ecto-sp13_S_contig10143.170.1 vs. uniprot
Match: D7G5L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L0_ECTSI) HSP 1 Score: 778 bits (2008), Expect = 2.870e-276 Identity = 374/378 (98.94%), Postives = 377/378 (99.74%), Query Frame = 1 Query: 433 GEEKTSAAWRVTASLYEEVTWAHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSPLVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLDSPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEV 1566 GEE+TSA WRVTASLYEEVTWAHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSP+VVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGL+SPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEV Sbjct: 197 GEEETSATWRVTASLYEEVTWAHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEV 574
BLAST of mRNA_Ecto-sp13_S_contig10143.170.1 vs. uniprot
Match: A0A7S2FHZ6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHZ6_9STRA) HSP 1 Score: 473 bits (1216), Expect = 2.130e-155 Identity = 231/369 (62.60%), Postives = 277/369 (75.07%), Query Frame = 1 Query: 463 VTASLYEEVTWAHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSPLVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLDSPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLH-SKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEV 1566 V YE +T AHGGLY FQ L DP RVV+AMG V+D + V +P +V GLLGL + Q+CCGGQHAA+LT GE++TWGRGGFGRLGHG+ + L P+ + ALEGI C QVACGFAYTA VT G LYTWGAGENGRLGLGDV DRH PS VE + + +++V+AGSVH+CVLTR G VY+FGKHEYTGHG EDVL PRL+ F G + ++QISVGPGGYHT+ALT VY WGHNRV QLG NS PRN+EGA+FLP+P+ V SL +N+ +VVAGWGHSAALTV G++ +CGRN+QGQLGLG PQ FP+NERGHP+QA F +D+L K+ QIACGGEHSVA+ E G+V Sbjct: 298 VGVGAYEALTSAHGGLYAGFQHLCDPARVVYAMGTVEDDANLMV---------TTPTLVNGLLGLPISQICCGGQHAAILTAFGEVYTWGRGGFGRLGHGDTQSLSDPKFVSALEGIKCCQVACGFAYTAVVTTEGALYTWGAGENGRLGLGDVEDRHVPSHVEDMSLTPIQQVFAGSVHTCVLTRPGQVYSFGKHEYTGHGCTEDVLLPRLLDVFDGKT---IKQISVGPGGYHTIALTTDRGVYTWGHNRVGQLGYSNS-DAPRNVEGAHFLPTPKKVASLQKLNVRQVVAGWGHSAALTVSGEVLICGRNFQGQLGLGDPQDFPKNERGHPYQAQFITLDKLDGQKVIQIACGGEHSVALTECGDV 653
BLAST of mRNA_Ecto-sp13_S_contig10143.170.1 vs. uniprot
Match: A0A7S2HV15_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV15_9STRA) HSP 1 Score: 441 bits (1133), Expect = 1.120e-143 Identity = 222/357 (62.18%), Postives = 266/357 (74.51%), Query Frame = 1 Query: 499 HGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSPLVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLDSPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHS-KVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVA--ENG 1560 HGG++E FQ L DP RVV+ MG V+D V P +VQGLLGLS+ Q+CCGGQHAAVLT GE++TWGRGGFGRLGHGN E L +P ++ AL+ I C QVACGFAYTA VT G LYTWGAGENGRLGLGD DR PS+VE L +++V+AGSVH+CVL+R G VY+ GKHEYTGHG EDVL PR++ F G L++QISVGPGGYHT+ALT +V+ WGHNRV QLG NS PRN+EGA+FLP+P+ V SL I +VVAGWGHSA LTV G++ +CGRNYQGQLGLGSP+ F +NERGHPFQA F ++DRL ++ QIACGGEH+VA+ ENG Sbjct: 239 HGGVFECFQRLCDPARVVYVMGTVEDDTSMVVAR---------PTMVQGLLGLSIAQICCGGQHAAVLTSFGEVYTWGRGGFGRLGHGNTETLTTPNKVTALDSIVCSQVACGFAYTAVVTTEGALYTWGAGENGRLGLGDSEDRCIPSQVEDLSDIPIEQVFAGSVHTCVLSRTGHVYSCGKHEYTGHGATEDVLLPRILDIFQG---KLIKQISVGPGGYHTIALTIDREVFTWGHNRVGQLGYSNS-DAPRNVEGAHFLPTPKRVMSL-HHTIRQVVAGWGHSAVLTVSGEVLICGRNYQGQLGLGSPEEFQKNERGHPFQAKFEVLDRLDGDRVAQIACGGEHTVALCKEENG 581
BLAST of mRNA_Ecto-sp13_S_contig10143.170.1 vs. uniprot
Match: A0A7S4E565_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E565_9STRA) HSP 1 Score: 439 bits (1129), Expect = 1.780e-143 Identity = 219/360 (60.83%), Postives = 260/360 (72.22%), Query Frame = 1 Query: 496 AHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSPLVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLDSPRRIEA-LEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSK--VKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEV 1566 + GG Y AF AL+DP RVV+AMG VDD + GG D SP +V+GLLGL V VCCGGQHAAVLT G+++TWGRGGFGRLGHG+ L +PR + L G+ C QVACGFAYTAAV+ G LYTWGAGENGRLGLGDV DRH PS VE L + ++ V AGSVH+C L +G Y+FGKHEYTGHG DVL PR + GG VR+ISVGPGGYHT+AL VY WGHNRV QLG N VPRN EGA+F+P P+ VES+ G+ + +VVAGWGH+A LT DG YVCGRN+QGQLGLG P+ FP NERGHP+Q DF L++ L ++ Q+ACGGEHSVA+ +GEV Sbjct: 210 SRGGFYAAFVALSDPARVVYAMGTVDDDAN-----GG----DASPQLVEGLLGLPVASVCCGGQHAAVLTRDGDVYTWGRGGFGRLGHGDVRSLKAPRLVRGGLAGVVCAQVACGFAYTAAVSRDGALYTWGAGENGRLGLGDVDDRHEPSLVEALWPRRPLRRVNAGSVHTCALGVDGVAYSFGKHEYTGHGAAADVLAPRPLAGAFGGRA--VREISVGPGGYHTVALVSPSDVYTWGHNRVGQLGYANEDVVPRNGEGAHFVPRPRRVESVAGLRVRRVVAGWGHTALLTADGACYVCGRNFQGQLGLGDPEAFPHNERGHPYQPDFRLVETLARKRVAQVACGGEHSVALTADGEV 558
BLAST of mRNA_Ecto-sp13_S_contig10143.170.1 vs. uniprot
Match: A0A7S1XMC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC2_9STRA) HSP 1 Score: 414 bits (1065), Expect = 4.290e-135 Identity = 208/356 (58.43%), Postives = 255/356 (71.63%), Query Frame = 1 Query: 505 GLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSPLVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLDSPR--RIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEV 1566 GLYEAFQ +A+P +V+ MG V+D P E +P + GLLG++V QV CGGQHA LT+ G I+TWGRGGFGRLGHG+ + +PR R E L CVQVACGFAYTAA+TA G LYTWGAGENGRLG+GD DR+ P+ V+ + +VKEV+AGSVH+C+LT EG + + GKHEYTGHG EDVL P +P GA V++ISVGPGGYHT+ALT G V+ WGHNRV QLG GNS RN +GAYF+P PQ V L G+ + VVAGWGHSA LT G++Y+CGRN+QGQLGLGSP FP NERGHPFQ+ F + L HL+++Q++CGGEHSV + EV Sbjct: 47 GLYEAFQKIANPGTIVYCMGTVEDFPQTE---------PAAPAPIPGLLGVAVAQVSCGGQHATALTEDGRIYTWGRGGFGRLGHGDGRDVAAPRLVRSEPLRRERCVQVACGFAYTAAITAGGALYTWGAGENGRLGVGDDQDRYAPTLVK-IVQRVKEVFAGSVHTCILTLEGVMMSCGKHEYTGHGLTEDVLWP--LPLDDAFGGAAVKRISVGPGGYHTIALTSSG-VFTWGHNRVGQLGYGNSSRARRNTDGAYFIPVPQRVTCLDGVEVTDVVAGWGHSAVLTAAGEVYICGRNFQGQLGLGSPDKFPLNERGHPFQSVFVRLHTLGHLRVRQVSCGGEHSVCIDGRNEV 389
BLAST of mRNA_Ecto-sp13_S_contig10143.170.1 vs. uniprot
Match: A0A4D9CRE3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRE3_9STRA) HSP 1 Score: 405 bits (1042), Expect = 1.910e-128 Identity = 202/378 (53.44%), Postives = 260/378 (68.78%), Query Frame = 1 Query: 463 VTASLYEEVTWAHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSPLVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLDSPRRIEAL--EGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGL-HSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVG----MNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQ---HLKIKQIACGGEHSVAVAENGEV 1566 V +Y+ +T GGLYE FQ ADP +++AMG V+D H S +P V++ LG + QVCCGGQHAA+LT+ G ++TWGRGGFGRLGHG+ +P+R++AL E + C QVACGFAYTAAVT G++YTWGAGENGRLGLGD D+ P V+ L VKE++AGSVH+C L +G ++++GK EYTGHG +DVL P + F G L Q+SVGPGGYHT+ L+ G+VY WGHNRV QLG N+ VPRN EGA+FLP+P+ V++L G + I KV+AGWGHSA + +G +Y+CGRN+QGQLGLG P+ F +NER HP+ A F +I LQ K+KQ ACGGEHS A+ N EV Sbjct: 373 VAIEMYDRLTRRAGGLYEFFQEEADPATLLYAMGTVEDDAHSHP-------SSYTPAVLRSFLGYKIVQVCCGGQHAAILTESGHVYTWGRGGFGRLGHGDDALQATPKRVDALALEHVKCKQVACGFAYTAAVTTEGQVYTWGAGENGRLGLGDELDKMRPGHVKDLARYPVKEIFAGSVHTCALLEDGRIFSWGKCEYTGHGLQQDVLSPLHLDAFQG---QLFAQVSVGPGGYHTITLSTTGEVYTWGHNRVGQLGYTNNEEVPRNNEGAHFLPTPRRVKTLTGGGPPLRIQKVIAGWGHSAVVCGNGDVYICGRNFQGQLGLGDPKNFERNERNHPYLAHFRVITDLQTGGQQKVKQFACGGEHSAALLNNDEV 740
BLAST of mRNA_Ecto-sp13_S_contig10143.170.1 vs. uniprot
Match: W7TK43_9STRA (Regulator of chromosome condensation-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK43_9STRA) HSP 1 Score: 367 bits (943), Expect = 4.260e-118 Identity = 180/313 (57.51%), Postives = 227/313 (72.52%), Query Frame = 1 Query: 658 SVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLDSPRRIEAL--EGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGL-HSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVG----MNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQ---HLKIKQIACGGEHSVAVAENGEV 1566 SV QVCCGGQHAA+LT+ G ++TWGRGGFGRLGHG+ +P+R++AL E + C QVACGFAYTAAVT G++YTWGAGENGRLGLGD D+ P V+ L VKE++AGSVH+C L +G ++++GK EYTGHG +DVL P + F G L Q+SVGPGGYHT+ L+ G+VY WGHNRV QLG N+ VPRN EGA+FLP+P+ V++L G + I KV+AGWGHSA + +G +Y+CGRN+QGQLGLG P+ F +NER HP+ A F +I LQ K+KQ ACGGEHS A+ N EV Sbjct: 9 SVTQVCCGGQHAAILTESGHVYTWGRGGFGRLGHGDDALQATPKRVDALALEHVKCKQVACGFAYTAAVTMEGQVYTWGAGENGRLGLGDELDKMRPGHVKDLARYPVKEIFAGSVHTCALLEDGRIFSWGKCEYTGHGLQQDVLSPLHLDAFQG---QLFAQVSVGPGGYHTITLSTTGEVYTWGHNRVGQLGYTNNEEVPRNNEGAHFLPTPRRVKTLAGGGPPLRIQKVIAGWGHSAVVCGNGDVYICGRNFQGQLGLGDPKNFERNERNHPYLAHFRVITDLQTGGQQKVKQFACGGEHSAALLNNDEV 318
BLAST of mRNA_Ecto-sp13_S_contig10143.170.1 vs. uniprot
Match: F0Y909_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y909_AURAN) HSP 1 Score: 338 bits (866), Expect = 4.920e-108 Identity = 171/304 (56.25%), Postives = 202/304 (66.45%), Query Frame = 1 Query: 658 SVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLDSPRRIE-ALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEV 1566 +V VCCGGQHAAVLT GE++TWGRGGFGRLGHG+ L +PR + AL G+ C QVACGFAYTAAV+A G LYTWGAGENGRLGLGD YTGHG DVL PR + F G + VR+ISVGPGGYHT+AL VY WGHNRV QLG N+ VPRN EGA+F+P P+ V+S+ G+ + +VVAGWGH+A LT +G YVCGRN+QGQLGLG P+ FP NERGHP+Q DF L+DRL ++ QIACGGEHSVA+ E+GEV Sbjct: 1 AVAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACGFAYTAAVSAQGALYTWGAGENGRLGLGD-------------------------------------------YTGHGAAADVLTPRPLDAFGGRA---VREISVGPGGYHTVALVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLGAKRVAQIACGGEHSVALTEDGEV 258
BLAST of mRNA_Ecto-sp13_S_contig10143.170.1 vs. uniprot
Match: A0A835Z9L6_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L6_9STRA) HSP 1 Score: 300 bits (769), Expect = 2.460e-89 Identity = 181/421 (42.99%), Postives = 233/421 (55.34%), Query Frame = 1 Query: 436 EEKTSAAWRVTASLYEEVTWAHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSPLVVQGLLGLSVQQ---------------------VCCGGQHAAVLTDCGEI----------FTWGRGGFGRLGHGNREGLDSPRRIEALEGIPCVQVACGFA----YTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKI-----------KQIACGGEHSVAVAENG 1560 + +S++ RV+ ++ +T H G+YEA+QA++DP R+V+ MGVV D H +P+VV GLLGL V Q VC H A C + ++ + L R + R+ L + V AC Y A + GAGENGRLG G D+ P+ VE LH +V+ VYAGSVH+CVLT G+VY+FGK EYTGHG DVL P+L+ F+G V+ ISVGPGGYHT+ALT G VY WGHNRV QLG GNS P+N+EGA+F P PQ V +L +V VVAGWGHSAALT GQLY+CGRNY+GQLGLG P F QNERGH +QA F ++ L + ++ QI+CGGEHS + + G Sbjct: 220 QRSSSSSARVSMHRFDALTHEHAGVYEAYQAVSDPGRLVYVMGVVGDDAHAV---------QSTPIVVTGLLGLKVSQSAAVEGVALVHLALSASXXGTVCEXXCHFADDDACSPVAYLSFVTIHDYSEKHAAYRCLVRPIRGSCERSCRLP-LVSLYRVARACRITELDDYLCTAKALRQE-AMGAGENGRLGHGSAQDKLLPTEVEALHGRVQLVYAGSVHTCVLTTVGSVYSFGKFEYTGHGATRDVLSPQLVGAFNG---MPVKSISVGPGGYHTIALTQAGTVYTWGHNRVGQLGYGNSEVAPKNVEGAFFQPLPQEVTTLRDKGVVAVVAGWGHSAALTASGQLYICGRNYKGQLGLGDPVLFQQNERGHHYQAHFQQLEDLSYERVTQAVLCYAAHTSQISCGGEHSAVITQGG 626 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10143.170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10143.170.1 >prot_Ecto-sp13_S_contig10143.170.1 ID=prot_Ecto-sp13_S_contig10143.170.1|Name=mRNA_Ecto-sp13_S_contig10143.170.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=365bp MGVVDDGPHHEVGEGGEGWSDVSPLVVQGLLGLSVQQVCCGGQHAAVLTDback to top mRNA from alignment at Ecto-sp13_S_contig10143:60..5603+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10143.170.1 ID=mRNA_Ecto-sp13_S_contig10143.170.1|Name=mRNA_Ecto-sp13_S_contig10143.170.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5544bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10143:60..5603+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10143:60..5603+ >mRNA_Ecto-sp13_S_contig10143.170.1 ID=mRNA_Ecto-sp13_S_contig10143.170.1|Name=mRNA_Ecto-sp13_S_contig10143.170.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1095bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10143:60..5603+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |