mRNA_Ecto-sp13_S_contig1014.167.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1014.167.1 vs. uniprot
Match: A0A6H5JDR1_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDR1_9PHAE) HSP 1 Score: 475 bits (1222), Expect = 1.910e-158 Identity = 230/244 (94.26%), Postives = 232/244 (95.08%), Query Frame = 1 Query: 70 MNTCAAPGCMEPTSQRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELARLRGATDGEAALQGRSTVGIVSIFDHQVSNCIMSLEELPTAGGPDSQGWELCPVVNMLGVPLAIKKVSPCACHICLRGNSQIPEPRNQVATRLVIEPHNGLAPPKWQGGPHNHLGTVAVARTDLRDFTVEDWRVLDDYINNTIFGVWGMEPSERIQLLPRVCNSQAFARYTAAAGRSQEDEEEAAYGASFGGGFVG 801
MNTCAAPGCME TSQRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELAR RGATD EAALQGRSTVGIVSIFD QVSN IMSLEELPTAG P +QGWELCPVVNMLGVPLAI KV PCACHICLRGNSQIPEPRNQVATRL IEPHNGLAPPKWQGGPHNHLGTVAVAR DLRDFTVEDWRVLDDYI NTIFGVWGMEPSERIQLLPRVC+SQAFARYTAAAGRSQEDEEEAAYGASFGGGFVG
Sbjct: 1 MNTCAAPGCMELTSQRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELARQRGATDSEAALQGRSTVGIVSIFDQQVSNSIMSLEELPTAGAPGAQGWELCPVVNMLGVPLAIMKVCPCACHICLRGNSQIPEPRNQVATRLAIEPHNGLAPPKWQGGPHNHLGTVAVARMDLRDFTVEDWRVLDDYICNTIFGVWGMEPSERIQLLPRVCSSQAFARYTAAAGRSQEDEEEAAYGASFGGGFVG 244
BLAST of mRNA_Ecto-sp13_S_contig1014.167.1 vs. uniprot
Match: A0A0G4EBD7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EBD7_VITBC) HSP 1 Score: 82.4 bits (202), Expect = 8.750e-15 Identity = 46/103 (44.66%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 304 CIMSLEELPTAGGPDS--QGWELCPVVNMLGVPLAIKKVSPCACHICLRGNSQIPEP--RNQVATRLVIEPHNGLAPPKWQGGPHNHLGTVAVARTDLRDFTV 600
C M E+P + P S GW C V +++G+PL I++ + PE NQVATRL+IEP +G APP+W GGPHN LG V VARTD + FT+
Sbjct: 41 CSMENVEIPASVLPVSAANGWHKCKVPHLMGIPLMIRQ-----------WQAYKPEDFTDNQVATRLMIEPDSGFAPPQWLGGPHNMLGRVMVARTDGKPFTI 132
BLAST of mRNA_Ecto-sp13_S_contig1014.167.1 vs. uniprot
Match: A0A8K0RFX9_9PLEO (Uncharacterized protein n=1 Tax=Paraphoma chrysanthemicola TaxID=798071 RepID=A0A8K0RFX9_9PLEO) HSP 1 Score: 69.3 bits (168), Expect = 2.480e-9 Identity = 56/185 (30.27%), Postives = 83/185 (44.86%), Query Frame = 1 Query: 88 PGCMEPTSQRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELARLRGATDGEAALQGRSTVGIVSIFDHQVSNCIMSLEELPTAGGPDSQGWELCPVVNMLGVPLAIKKVSPCACHICLRGNSQIPEPRNQVATRLVIEPHNGLAPPKWQGGPHNHLGTVAVARTDLRDFTVEDWRVLDDYINNTI 642
P E Q CS+CKTA YCS +CQRRDW G HK +C+ + A A G + GI + E+ L V +LG+PL I +V + N+++ + +AT L I+ +G AP +WQ +H+GT VAR D + + E + YI+ +
Sbjct: 17 PNPSETVFQHCSACKTAYYCSTDCQRRDW-KGSHKQQCKVNLLTKEAQAIAAQHTGDTVTGIRLACTKEPGG----FWEVEVPSKHSIFDNALLEVPALLGIPLVIHRVGT-------QSNNRV-DLDCPIATWLNIKYADGFAPMEWQ----SHVGTCLVARKDKKPLSQEHMDAVHMYISRLL 184
BLAST of mRNA_Ecto-sp13_S_contig1014.167.1 vs. uniprot
Match: A0A0C3FQR0_PILCF (MYND-type domain-containing protein n=1 Tax=Piloderma croceum (strain F 1598) TaxID=765440 RepID=A0A0C3FQR0_PILCF) HSP 1 Score: 63.9 bits (154), Expect = 1.060e-7 Identity = 55/184 (29.89%), Postives = 86/184 (46.74%), Query Frame = 1 Query: 106 TSQRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELARLRGATDGEAALQGRSTVGIVSIFDHQVSNCIMSLEELPTAGGPDSQGWELCPVVNMLGVPLAIKKVSPCACHICLRGNSQIPEPRNQVATRLVIEPHNGLAPPKWQGGPHNHLGTVAVARTD---LRDFTVEDWRVLDDYINNTIFG 648
T +CS CK+AKYCS ECQR DW H+ +CR ++QG ++ + + ++ PT P ++ PV ++G+P+ I + + H G E N +AT L+I+P +G AP WQ +GTV V R D L +E + +D++ N +FG
Sbjct: 15 TLSQCSRCKSAKYCSTECQRTDWP--SHRPQCRP-----------PSIQGI----VIGCNNDRYGGTFRPIDIQPTH--PIHSAGQVSPVSRVVGLPIIIYRHT----HADDGGT----ELDNLIATHLMIDPTDGYAPLDWQRA----VGTVTVKREDGQPLSPEAIETIWMYNDHLLN-LFG 166
BLAST of mRNA_Ecto-sp13_S_contig1014.167.1 vs. uniprot
Match: A0A409XQH5_PSICY (MYND-type domain-containing protein n=1 Tax=Psilocybe cyanescens TaxID=93625 RepID=A0A409XQH5_PSICY) HSP 1 Score: 60.5 bits (145), Expect = 3.570e-6 Identity = 66/210 (31.43%), Postives = 92/210 (43.81%), Query Frame = 1 Query: 70 MNTCAAPGCMEPTS-QRCSSCKTAKYCSRECQRRDWIVGGHKDRCREL---------ARLRGAT-DG-EAALQGRSTVGIVSIFDHQVSNCIMS-----LEELPTAGGPDSQ---GW------------ELCPVVNMLGVPLAIKKVSPCACHICLRGNSQIPEPRNQVATRLVIEPHNGLAPPKWQGGPHNHLGTVAVARTDLRDFTVE 603
M TC C T+ +RCS CK+A YCS+ECQ DW HK C +L A+ RG+ DG ++ L + +SI N I S ++ LP D + W ELCP + +P+ I SP H+ + S + + NQ A L IEPH+G AP WQ ++ G+ R D + T E
Sbjct: 1 MTTCER--CKTTTALKRCSRCKSASYCSKECQTADWKT--HKRNCEQLSGSDASIPPAQNRGSQGDGKDSGLTPAAASVPISIPKSLAENTIDSEAVWGVKLLPGRYPFDPKRFISWQFNKDHEIFKRGELCPFTALYKIPIII--FSP-RIHLGVHDPSDMED--NQPAVYLRIEPHDGFAPMHWQ---MDYPGSCYAVRRDGQPLTTE 198
BLAST of mRNA_Ecto-sp13_S_contig1014.167.1 vs. uniprot
Match: A0A067PMT2_9AGAM (MYND-type domain-containing protein n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067PMT2_9AGAM) HSP 1 Score: 58.9 bits (141), Expect = 4.720e-6 Identity = 60/216 (27.78%), Postives = 83/216 (38.43%), Query Frame = 1 Query: 115 RCSSCKTAKYCSRECQRRDWIVGGHKDRCRELARLRGATDGEAALQGRSTVGIVSIFDHQVSNCIMSLEELPTAGGPDS-----------QGWELCPVVNMLGVPLAIKKVSPCACHICLRGNSQIPEPRNQVATRLVIEPHNGLAPPKWQGGPHNHLGTVAVARTDLRDFTVEDWRVLDDYINNTI--FGVWGMEPSERIQLLPRVCNSQAFARY 723
RCS C+TA YCS ECQ+ DW HK C F +V ++ E GGP + +CP+ +G+PL I + + + + NQ+AT L+I +G AP WQ LG+V V R D + T E + Y ++ I FG M P R+ N AF RY
Sbjct: 2 RCSRCRTAFYCSSECQKADWT--SHKAAC---------------------------FPEKVIGIVIRCEGERRGGGPFQTIEIRPNHEIHRSGMICPLSKKIGLPLVIYRHEKVP---WMNRSYEDASLDNQIATYLMIG-QDGFAPADWQ----KQLGSVTVMRKDGKPLTHEAIETIWMYHDSLIEEFGDDPMLPQRRM-------NPNAFQRY 173
BLAST of mRNA_Ecto-sp13_S_contig1014.167.1 vs. uniprot
Match: A0A7S0XWC7_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWC7_HEMAN) HSP 1 Score: 57.8 bits (138), Expect = 6.610e-6 Identity = 22/35 (62.86%), Postives = 30/35 (85.71%), Query Frame = 1 Query: 112 QRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELAR 216
QRCS+C++A YCS+ECQ++ W GGHK +C+ELAR
Sbjct: 44 QRCSACQSAHYCSKECQKKHWSEGGHKTKCKELAR 78
BLAST of mRNA_Ecto-sp13_S_contig1014.167.1 vs. uniprot
Match: A0A8H8CNW8_PSICU (MYND-type domain-containing protein n=2 Tax=Psilocybe cubensis TaxID=181762 RepID=A0A8H8CNW8_PSICU) HSP 1 Score: 55.5 bits (132), Expect = 3.190e-5 Identity = 44/147 (29.93%), Postives = 64/147 (43.54%), Query Frame = 1 Query: 112 QRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELARLRGATDGEAALQGRSTVGIVSIFDHQVSNCIMSLEELPTAGGPDS--------QGWELCPVVNMLGVPLAIKKVSPCACHICLRGNSQIPEPRNQVATRLVIEPHNGLAPPK 528
+RCS CK A YCS+ECQ W + HK C+ ++ AT + G H V + P P + E+CP + GVP+ + SP H+ G S + + NQ A L I+P +G+APP+
Sbjct: 15 KRCSGCKAASYCSKECQETHWAI--HKANCKSSSKSE-ATKSPPLNPNTTPSGSSPGVVHGVKLIAENGRYRPGRFVPFEFKKDHNIFKRGEICPFTALYGVPIIL--YSPLV-HL---GKSDVDDKDNQPAVYLRIQPDSGIAPPQ 152
BLAST of mRNA_Ecto-sp13_S_contig1014.167.1 vs. uniprot
Match: A0A2A9NDP8_9AGAR (MYND-type domain-containing protein n=1 Tax=Amanita thiersii Skay4041 TaxID=703135 RepID=A0A2A9NDP8_9AGAR) HSP 1 Score: 57.0 bits (136), Expect = 3.680e-5 Identity = 54/162 (33.33%), Postives = 71/162 (43.83%), Query Frame = 1 Query: 118 CSSCKTAKYCSRECQRRDWIVGGHKDRCRELARLRGATDGEAALQGRSTVGIVSIFDHQVSNCIMSLEELPTAGGPDSQGWELCPVVNMLGVPLAIKKVSPCACHICLRGNSQIPEPRNQVATRLVIEPHNGLAPPKWQGGPHNHLGTVAVARTDLRDFTVE 603
CS CKTA+YCS+ECQ W + H+ C+ + T G L G + + + + LP + + G ELCPV + G PL I SP H+ G E NQ A L IEP + AP WQ GT +AR D + T E
Sbjct: 28 CSKCKTAQYCSKECQTEHWPI--HRPMCKPHDPQK--TWGIQLL----CKGEFKLLNTEDESARFKHIHLPNSHPVFTIG-ELCPVPALCGFPLLI--FSP-GVHL---GQQPTGEWENQPAVYLRIEPKDAFAPMPWQ---MLDPGTCILARKDHKSLTKE 171
BLAST of mRNA_Ecto-sp13_S_contig1014.167.1 vs. uniprot
Match: A0A074S2P3_9AGAM (MYND finger protein n=3 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A074S2P3_9AGAM) HSP 1 Score: 56.6 bits (135), Expect = 4.340e-5 Identity = 51/188 (27.13%), Postives = 81/188 (43.09%), Query Frame = 1 Query: 70 MNTCAA--PGCMEPTSQRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELARLRGATDGEAALQGRSTVGIVSIFDHQVSNCIMSLEELPTAGGPDSQGWELCPVVNMLGVPLAIKKVSPCACHICLRGNSQIPEPRNQVATRLVIEPHNGLAPPKWQGGPHNHLGTVAVARTDLRDFTVEDWRVLDDY 627
M+TCA ++ +RCS CK A YCS+ECQ W HK C + + A + +++ ++ ++E P S G E+CP+ +G+PL + + ++G + N +A L +E HN AP WQ L TV VAR D + T + L ++
Sbjct: 1 MDTCAQCHKQLVQSDLKRCSKCKKATYCSKECQVAHWKT--HKLSCSKPSAQIVAIE------------VINEYERGNGGSFRTVEISPNHPVFSSAG-EVCPIPTAIGIPLRVYRHP-------IKGPAN-----NAMALWLRVEMHNLFAPMDWQ----LDLSTVTVARQDHKPLTPQVVEALSEF 157 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1014.167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1014.167.1 >prot_Ecto-sp13_S_contig1014.167.1 ID=prot_Ecto-sp13_S_contig1014.167.1|Name=mRNA_Ecto-sp13_S_contig1014.167.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=245bp MNTCAAPGCMEPTSQRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELARLback to top mRNA from alignment at Ecto-sp13_S_contig1014:9673..17416- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1014.167.1 ID=mRNA_Ecto-sp13_S_contig1014.167.1|Name=mRNA_Ecto-sp13_S_contig1014.167.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7744bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1014:9673..17416- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1014:9673..17416- >mRNA_Ecto-sp13_S_contig1014.167.1 ID=mRNA_Ecto-sp13_S_contig1014.167.1|Name=mRNA_Ecto-sp13_S_contig1014.167.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=735bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1014:9673..17416- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |