Homology
BLAST of mRNA_Ecto-sp13_S_contig101370.164.1 vs. uniprot
Match:
D8LHY7_ECTSI (Heat shock protein 90 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHY7_ECTSI)
HSP 1 Score: 72.8 bits (177), Expect = 5.520e-14
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 1
Query: 1 FQVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 111
FQVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE
Sbjct: 713 FQVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 749
BLAST of mRNA_Ecto-sp13_S_contig101370.164.1 vs. uniprot
Match:
G3G5W9_9PHAE (Heat shock protein 90 family (Fragment) n=24 Tax=Fucaceae TaxID=3010 RepID=G3G5W9_9PHAE)
HSP 1 Score: 61.6 bits (148), Expect = 2.580e-11
Identity = 30/37 (81.08%), Postives = 35/37 (94.59%), Query Frame = 1
Query: 1 FQVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 111
FQVEDTE+FA+RVQR MAKTLNLSS++LL+E EIPDE
Sbjct: 44 FQVEDTESFASRVQRIMAKTLNLSSLELLDEAEIPDE 80
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig101370.164.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 5.52e-14 / Id = 100.00 Expect = 2.58e-11 / Id = 81.08 Sequence D8LHY7_ECTSI G3G5W9_9PHAE
Match Name E-value Identity Description
D8LHY7_ECTSI 5.520e-14 100.00 Heat shock protein 90 n=2 Tax=Ectocarpus TaxID=287... [more] G3G5W9_9PHAE 2.580e-11 81.08 Heat shock protein 90 family (Fragment) n=24 Tax=F... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 0 Model size 111 Hectar predicted targeting category no signal peptide or anchor Exons 1 Cds size 111
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462510.095564-CDS-Ecto-sp13_S_contig101370:387..498 1681462510.095564-CDS-Ecto-sp13_S_contig101370:387..498 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig101370 388..498 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig101370.164.1
>prot_Ecto-sp13_S_contig101370.164.1 ID=prot_Ecto-sp13_S_contig101370.164.1|Name=mRNA_Ecto-sp13_S_contig101370.164.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=37bp
FQVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE back to top mRNA from alignment at Ecto-sp13_S_contig101370:388..498-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig101370.164.1 ID=mRNA_Ecto-sp13_S_contig101370.164.1|Name=mRNA_Ecto-sp13_S_contig101370.164.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=111bp|location=Sequence derived from alignment at Ecto-sp13_S_contig101370:388..498- (Ectocarpus species13 EcNAP12_S_4_19m)TTCCAGGTGGAAGATACCGAGGCATTCGCCAACCGGGTACAGCGCGCCAT
GGCCAAGACCCTCAACCTTAGCAGCATGGACCTACTCGAGGAGATGGAGA
TCCCAGATGAG back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig101370:388..498-
>mRNA_Ecto-sp13_S_contig101370.164.1 ID=mRNA_Ecto-sp13_S_contig101370.164.1|Name=mRNA_Ecto-sp13_S_contig101370.164.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=111bp|location=Sequence derived from alignment at Ecto-sp13_S_contig101370:388..498- (Ectocarpus species13 EcNAP12_S_4_19m) back to top