Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 165 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 165 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462509.690448-CDS-Ecto-sp13_S_contig10130:671..757 | 1681462509.690448-CDS-Ecto-sp13_S_contig10130:671..757 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10130 672..757 - |
| 1681462509.7048512-CDS-Ecto-sp13_S_contig10130:3140..3219 | 1681462509.7048512-CDS-Ecto-sp13_S_contig10130:3140..3219 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10130 3141..3219 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10130.158.1 >prot_Ecto-sp13_S_contig10130.158.1 ID=prot_Ecto-sp13_S_contig10130.158.1|Name=mRNA_Ecto-sp13_S_contig10130.158.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=55bp
CCCSWLWLESPRWVTLPKAPSYCCNLWWQDLVSYTDSCVPRTRGFGDDQQ
GQDP* back to topmRNA from alignment at Ecto-sp13_S_contig10130:672..3219- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10130.158.1 ID=mRNA_Ecto-sp13_S_contig10130.158.1|Name=mRNA_Ecto-sp13_S_contig10130.158.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2548bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10130:672..3219- (Ectocarpus species13 EcNAP12_S_4_19m)
TGCTGCTGTTCCTGGCTTTGGCTGGAGAGTCCTCGATGGGTCACTCTCCC
AAAGGCACCATCATACTGCTGCAACTTATGTAAGTTTTCTCTGCCAAGGA
TTCTCTCTGTCTTTATCTGCTACTGACTGAAAACCTCCCACCTATCTCGC
GCTCTCGCGCTTCAAATCTTGTGAATTCTGAAACACTTCAACATGCGGTC
CGTTGGTTTGGGGTCAAAAGGTCAGGTTGTAGCCGTTAGAGGCGGGTGCT
ACCCCGCGACTCTTACAACCCTGCCTACAGTACAGTGGTGCCCACTCACC
TTCTCTCTCCCACCACGCAGTCTGCACGCAACACACAGAACACGAAGGCA
TGCCCACATGTCGGCTCTGGCTTTCGTGTGCTGTTCTGAAATAAGAGAGG
CGAGTTGAACGGCCACCTGCTGCACCGCCGCAATTTTGATTCAAAACCAA
CTTGACTGGTTGCTATTTTAATGTTTTGATAATCAGCTCACACCGGCTCA
GACTAAACTTCGAGCGCATGCTATCTTAGTTCTCACCAAGTGCCGGGCAT
ACTCGAATGTACAAGGCGGCCATGATGCATCACGTCCTGCTGGTGTGTTT
CATATTTTGTTGCTGGCGTGACGCTGCGGGCGGCGCGGTTTGGAAATATA
TGTGTTCGGAAGTTGAACCATTCGATCTCGCGGTGTAGTGTATTACCCCG
AAACGCTGAAAGATGGAGACGCGCAAGGCATCTCCTCCCGGGTGTGCTTA
AACAGAGAGAGAGGGATCAGATAAACGTCCTGGTTGTGTTTGTGCATGCA
AACTCGTAGGCATGCGCATCATGTACGTGTCGATAATTATTTATCATGTT
TTCGTCAGTCGTTCTTTGGTTTAAGTTGGCACGTTGGCTCCAGAGACGGT
TTGCTCTCTTCTTGGGTCGACAACACAATCTTGCTCGTGAATGCTTTGGT
GTGGGTGACTCCAAGAATGTAGCAGGCGAGCGTAATTTATATCGCAAGCA
CCCCGTGTGTCTTTTGGACTGAACGAACACTCGGGTGTTTACTAACTTAC
ACAGCATACAAACAAAGACACGATCGGGTTTCGAGTTATTTTTTTTGTGT
GTTCAGCACGCAGCAGGTCAGGTACGATTTGTTATCCGGTATATATGTCC
CTTTGCTCCCGAACCGCGGCGAAAGGACTAAACATTTTCGGGATCAAATG
TATAAGTGCTGCCTTCCAAACATCATCGGCATAAGCGTCAATATATTGAA
CAGGTGCTGTGATATTTTCCCTGTACCCATGGTTTTGAATAGGTCACGAC
CTGACCTGATCCATTACTTTCACCGATCAGCACAGGTCGTCGAGTTGATC
TGATCTGAACTTCCACGCGGACGGATACTTGCGTATATAGGGGTTGAGAG
GATGATGTAGAAGCTTAGTTAGCGTAGACTAACATCCCTCGAATACATGT
ATGTGGCCGTCGAAGGAGAGATGAGGTCGTCATCAAACGCCAAGCCGAGG
CTGCGCACAACATGGCGCATGCTGGTTTTACCCATCAATCCCTGAAGACG
CTGGAGACTTACCCGTTGATTTTCTTGTTTCAGAGCAATGCTCGCTGTTT
CCTTAATCTCTTTGGTGGACTTGCAAAAACGCGGGGGGGCGGTGACAATC
CGAAATCTACGCCGGAACTTACCGGAACCACACACTTTTCACAGCCGTGC
CCACCGCCACGGACCGCCACGGTCGTCAGCAGTAGCTAGTGGCATCAGCT
ACTTTTCAACCCGCATTTCAGGAGATTGGGGCCAGTGGCGGCGAGCGCAA
GCAGTACAACACGCAGGGTGTCGGTCAAATACCGGAGGTTTGCAGAGATT
GCAGGCGGCTACCACGACCCTCGACATCAGCGTACCCAAGAAGCAGATTT
GAGCGCGCCTACACCCCCCCCCCCCGCTGCTATATGGTATCCCCTAGTGA
TTTCCATAGAATGCATAGAGCCTACAAATAGCGCAAACCCGACCTTGTCT
GAGCGTCTTCCGATCGATTTGACTCTTTAGACTTGAATGTAAAGAGTAGT
GGGGCATTTATTATCTTGATTTCGAAGGAGTCGTTCGGAGGTAGAAGTGA
AGTGTACATGTTTAGAGCAGCCTCTACTGCTGCTGTGCGAAAATCAACAA
TTTCTGTTTTTCGCGTTGCCTTCCGACTGGCCTTGTGATTGTCTTTGTGC
ATTTTTTTGTGCTCGTGCGTTCGTTTTCAAAATTGGTTAACATCAAAACT
CCATATCTTGCAACCCTTGTCATCCCGTGACAATAGTCCCCTATAACTTG
AGCCTCCTTCAATATCCTGCCACTCTCCCAAGAATTACCGTTCAGATTCT
GTGCTCAAATCCCGCAACAACATGCACAGCCTTTAGACCCTCTCCTCTAA
AATTGATCGTCACCACGTACAGCTAACACCATGGACTACTGCTTCTGTTG
ACTCGTGATTAGGGTGGCAAGACTTGGTTTCCTACACCGACTCCTGCGTT
CCGCGAACTCGGGGCTTCGGCGATGATCAGCAAGGGCAAGACCCGTGA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10130:672..3219- >mRNA_Ecto-sp13_S_contig10130.158.1 ID=mRNA_Ecto-sp13_S_contig10130.158.1|Name=mRNA_Ecto-sp13_S_contig10130.158.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10130:672..3219- (Ectocarpus species13 EcNAP12_S_4_19m)
TGCTGCTGTTCCTGGCTTTGGCTGGAGAGTCCTCGATGGGTCACTCTCCC
AAAGGCACCATCATACTGCTGCAACTTATGGTGGCAAGACTTGGTTTCCT
ACACCGACTCCTGCGTTCCGCGAACTCGGGGCTTCGGCGATGATCAGCAA
GGGCAAGACCCGTGA back to top
|