mRNA_Ecto-sp13_S_contig1013.157.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: A0A6H5KN39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN39_9PHAE) HSP 1 Score: 756 bits (1951), Expect = 1.290e-265 Identity = 397/416 (95.43%), Postives = 406/416 (97.60%), Query Frame = 1 Query: 373 AWDAFMDGEEDATVLASGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAKVVEADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEGHDH 1620 AWDAFMDGEEDATVLA GETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTAL+SP G AVAASVSEGM+EXXXXXXXXXXXXXGDTVSGAKWAQA+VATCIACF SFAGIFLLI+KRIANG+DLSHAYMFATGAILTA+LIHIIPESFERFEDAELGL+DLGIHTGVT+LAGITASIIIRAVCTAGHSHTGAPATAKVV ADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNL SGIPAILGAVLIL LGDQFT FQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGAL+IGIPLMFHAHCHA E HEGHDH Sbjct: 93 AWDAFMDGEEDATVLAFGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALVSPSGTAVAASVSEGMEEXXXXXXXXXXXXXGDTVSGAKWAQAMVATCIACFASFAGIFLLISKRIANGIDLSHAYMFATGAILTAALIHIIPESFERFEDAELGLHDLGIHTGVTMLAGITASIIIRAVCTAGHSHTGAPATAKVVGADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLASGIPAILGAVLILGLGDQFTTFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGALVIGIPLMFHAHCHADEGHEGHDH 508
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: D7FRW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW4_ECTSI) HSP 1 Score: 738 bits (1906), Expect = 7.270e-259 Identity = 378/408 (92.65%), Postives = 387/408 (94.85%), Query Frame = 1 Query: 373 AWDAFMDGEEDATVLASGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAKVVEADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGALIIGIPLMFHAHCHAG 1596 AWDAFMDGEEDATVLASGET IPDATVVYQTTLDESI+VVPAEVTDAGAYALLLEHGGGEVSTALISP G AVAASVSE MDE GDTVSGAKWAQAIVATCIACFTSF GIFLLINKRIANGVDLSHAYMFATGAILTASLIHI+PESFERFED+ELGLYDLGIHTGVT+LAGITAS+IIRAVCTAGHSHTGAPATAKVVEADG QSRGPTTPTIP+NL ELV+QRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALS T+DGKGLGDS+RKLGSFAFGALIIGIPLMFHAHCHAG Sbjct: 105 AWDAFMDGEEDATVLASGETVIPDATVVYQTTLDESIIVVPAEVTDAGAYALLLEHGGGEVSTALISPLGTAVAASVSEFMDEEEEEE--------GDTVSGAKWAQAIVATCIACFTSFVGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIVPESFERFEDSELGLYDLGIHTGVTMLAGITASVIIRAVCTAGHSHTGAPATAKVVEADGGQSRGPTTPTIPDNLLELVEQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSLTMDGKGLGDSIRKLGSFAFGALIIGIPLMFHAHCHAG 504
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: A0A6H5L662_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L662_9PHAE) HSP 1 Score: 381 bits (978), Expect = 8.080e-119 Identity = 226/501 (45.11%), Postives = 305/501 (60.88%), Query Frame = 1 Query: 280 RTKSQTSAFLVNLAGCQLTQHPAFRVPSCRTAWDAFMDGEEDATVLASGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHT----------------------------GAPATAKVVEADGSQ-SRGP--------------TTPTIP-----ENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSST--VDGKG----LGDSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEGHDH 1620 R + T AF+V LA T+ A AWDA+ G EDATVLA GE A P VVYQ L++ +V+V EVT AGAYA+ LEHG EV L SP G XXXXXXXXXX + SG +W +VA+ + SFAG+ ++ NKR+A + LSHA++FA+GA+LTA+L+HIIPE+ E + + L+DLG++ G+T+L G++ S++I + +GHSH+ GA T + A+G + S P T P P +NL L+ +R GR+L D KGL+P+CWNV++GD VH+F G TIGAAFL+C +T+GWT+TAS ++HE+P E+ADF+ALLNGGMS+KQA +N +S + A+LG ++ILALGD ++ ++I+LLLG+GSFIFI L+ELLPEAL T V KG + L KLGSF GA++IGIPL+ HC A HEGHDH Sbjct: 61 RFEQDTLAFMVVLAASADTEGLAGAEEDAEAAWDAYTSGAEDATVLAPGEPATPSTVVVYQVALEDPLVLVQVEVTIAGAYAVFLEHGAEEVGIVLASPSGVVXXXXXXX-------XXXXXXXXXXSGSASGTQWVNGLVASFVVSVCSFAGLLVVANKRVAYSIGLSHAFIFASGALLTAALVHIIPEAMEGLDSSYDNLHDLGLYAGLTVLGGLSVSVVIHGLMESGHSHSPHEGHSHGGGTETVRPGGGHGHHARVSDGAGTTMPLGMAEGDKVSAWPGGNSPHAVQIQADVTQPPSPAESSTDNLRALIAERAGRSLLDVKGLQPVCWNVVIGDLVHNFADGLTIGAAFLTCSATVGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILALGDTLSDKDVSIVLLLGSGSFIFIALSELLPEALVVTHAVSEKGAVAVMCSQLLKLGSFLLGAILIGIPLLVDQHCDAA--HEGHDH 552
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: D7FLW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLW4_ECTSI) HSP 1 Score: 372 bits (956), Expect = 4.320e-116 Identity = 213/434 (49.08%), Postives = 287/434 (66.13%), Query Frame = 1 Query: 373 AWDAFMDGEEDATVLASGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAK---VVEADGSQSR-----GPTTPTIP--------ENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALS--STVDGKGLGDSLR----KLGSFAFGALIIGIPLMFHAHCHAGEEHE 1608 AWD + G EDATVLASGE+A P A VVYQ TL++ +V+VP +VT AGAYA+ LEHG E EG XXXXXXXXXXX G +G KW A+VA+ + SFAGI ++ +K +AN +DLSHA++FA+GA+LTA+L+HIIPE+ E E++ L+DLG++ G+ ++ G++ I++ A+ +GHSH+ + VEA G ++ G + T+P +NL L+ RKG++L D KGL+P+CWNVI GD VH+F G IGAAFLSC +TMGWT+ AS ++HEVP E+ADF+ALLNGGMS+ QA +N +S + A+LG V+ILAL D + IAI+LL+GAGSFIFI L ELLP AL+ + V +G G R KLGSF GA++IGIPL+F HC G +H+ Sbjct: 98 AWDEYTSGAEDATVLASGESATPSADVVYQVTLEDPLVLVPVDVTAAGAYAVFLEHGSDE------------------EGXXXXXXXXXXXXXXETGTATAG-KWGNALVASLVVSACSFAGIVVVASKHVANNIDLSHAFVFASGALLTAALLHIIPEALEGLEESYGSLHDLGLYAGLAVMGGMSLGIVLHALLESGHSHSPGESXXXXXXAVEAGGGGAKASAYTGTSEATLPPSPVESNSDNLQALISARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKRGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCGTGHDHD 512
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: D8LNP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP7_ECTSI) HSP 1 Score: 320 bits (819), Expect = 7.700e-98 Identity = 189/385 (49.09%), Postives = 246/385 (63.90%), Query Frame = 1 Query: 484 VVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAKVVEADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSST------VDGKGLGDSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEGHDH 1620 +++P +V D GAYALL EHG EV TAL+S G + + EG DEXXXXXXXXXXXX + + A+W AI+AT I SF GI +IN+++AN + LSH + FA+GA+LTASL+HI+PES E L+D G+ G+ IL GI SI+I A+ +GH L K R+LFD KGLKP+CWNVI G+ VH+F G TIGAAFL+CGS+MGWTITAST++HE+P E+ADF+ALL GGMS+KQA +N +S + +LGAV+IL+L Q ++ +++ILLLG+GSFIFI LTELLP AL T G + + ++KLGSF GA +IG L+F HC A EGHDH Sbjct: 1 MMIPVDVVDTGAYALLFEHGSDEVGTALVSESGDVLVGTSEEG-DEXXXXXXXXXXXX---SATAAQWGNAILATVIVSLCSFTGILTIINQKVANAIGLSHTFTFASGALLTASLLHIVPESLEGIAAEYDHLHDAGLWAGLAILGGIGFSILIHALLESGHXXXXXX---XXXXXXXXXXXXXXXXXXXAGTAPLALTDKERSLFDLKGLKPVCWNVIAGELVHNFADGVTIGAAFLTCGSSMGWTITASTVLHEIPQELADFIALLAGGMSLKQAFLFNFLSALTCVLGAVVILSLRSQLSDADVSVILLLGSGSFIFIALTELLPGALEVTKAESDKAGGAVMCNQMKKLGSFVLGAALIGGALIFDQHCEA----EGHDH 374
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: D7FLV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV2_ECTSI) HSP 1 Score: 299 bits (766), Expect = 2.280e-90 Identity = 156/353 (44.19%), Postives = 226/353 (64.02%), Query Frame = 1 Query: 727 SFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHT-------------------------------------------------GAPATAKVVEADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSST--VDGKG----LGDSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEGHDH 1620 SFAG+ +++NKR+A + LSHA++FA+GA+LTA+L+HIIPE+ E + + L+DLG++ +T+L+G+ SI+I + +GHSH+ G A ++AD +Q P + +NL L+ +R+GR+L D KGL+P+CWNV++GD VH+F G TIGAAFL+C +T+GWT+TAS ++HE+P E+ADF+ALLNGGMS+KQA +N +S + A+LG ++IL+LGD ++ ++I+LLLG+GSFIFI L+ELLPEAL+ T V KG + L KLGSF GA++IG+PL+F HC A HEGHDH Sbjct: 5 SFAGLLVVVNKRVAYSIGLSHAFIFASGALLTAALLHIIPEAMEGLDSSYDNLHDLGLYASLTVLSGLFVSIVIHGLMESGHSHSPNEAHSHGGGEETVRPGGGNGHHARVSDDASTMMPLGLAEGDKVSAWPGGNSPQAVQIQADVTQPPSPAESST-DNLRALIAEREGRSLLDVKGLQPVCWNVVIGDLVHNFADGVTIGAAFLTCSATIGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILSLGDTLSDKDVSIVLLLGSGSFIFIALSELLPEALAVTHAVSEKGAVAMMCSQLLKLGSFVLGAILIGLPLLFDQHCDAA--HEGHDH 354
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: A0A6V1U7C3_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U7C3_HETAK) HSP 1 Score: 162 bits (410), Expect = 1.640e-38 Identity = 133/455 (29.23%), Postives = 200/455 (43.96%), Query Frame = 1 Query: 448 TVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKR----IANGVDLSHAYMFATGAILTASLIHIIPESF---ERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAKVVEADGSQSRGPTTPTIP--ENLWELVQQ---------------------------------------------RKGRALFDF----------KGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEGHDH 1620 T+V DE++ E DA YAL +H E+ L G + A +SE E XXXXXXXX VS W I A +A + G+ L R + + A F +GA+L+A+++H+IPE + E F D E LG + G+TIL G+ S+I+ H+ A V E + + T P +++ E+ + R+GR+ +G++P WN+++GD + + G I AF C S+MGW + + + HE+P E+ DF L++ G+S QAL NL SG+ AI G +++L L T + +LL G+G F+F G ELLPE L++ G L ++ + A GA + + LM HAHC AG H H Sbjct: 107 TLVLDNENDETVFTF--ETLDASGYALFFQHSPDELDFTLKDASGTTLVAELSESSTEDHDHXXXXXXXXDELEVSSTVWGLVIGANVLAGAAAMVGLVLFSLMRGMGDRTKAIAMQLATAFGSGALLSAAIVHLIPEGYALIESFVDGE----QLGTNAGLTILGGLMFSLILHMAIQHKHAAVDAEPGCSVKEERAAVAPTSTFEASPGGDDVVEMALEAEAVEGPPEAQVHVEGDSCDDECGLAATNEVGDCNDCAEEGGGRLRQGRSAVKLLAALPRVGPVRGVRPQAWNLVLGDCICNGLDGMVIAVAFAGCDSSMGWIVFGAVMSHEIPQEIGDFFVLIDSGLSFGQALLANLFSGVCAIFGGIIVLLLNSSLTADVVGYMLLFGSGMFLFAGAAELLPELLAAP-GGPKL--AVARAAMVALGAAAVVVSLMSHAHCDAGFLGAAHAH 552
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: K3WD58_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD58_GLOUD) HSP 1 Score: 137 bits (344), Expect = 3.750e-30 Identity = 113/415 (27.23%), Postives = 183/415 (44.10%), Query Frame = 1 Query: 487 VVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLI--NKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAE---LGLYDLG-IHTGVTILAGITASIIIRAVCTAGHSHTGAP----------------------ATAKVVEADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLK------PICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSF---AFGALIIGIPLMFHAHCHAGEEHEGHDH 1620 +VP VT AGA+ LL +HGG EVS ++ S ++G+ D+ SG+ W IVA+ + TSF G+ +L RI + V+ + FA G +L + H+ PE E D +G++ LG I + + +G+ + H+H G + + A+G+ P TP + + + F +K P+ W +GD H+FT G + AF SC +++GW + ++HEVP + DF L GM + QAL N ++ + ++LGA+++LA G + + ++ G G+ +FIGL+ LLP L G+ D R L F + G ++IG+ + H HC A H H Sbjct: 152 IVP--VTTAGAFMLLTQHGGDEVSVEVMD--------STNQGVSFLECHAGCDNEEEESDSKSGS-WVGPIVASLVISLTSFVGVIILSFGKSRIESIVE--YMTSFAAGCLLGVVVFHLYPEGSEYLGDVGEWVMGVWVLGGIAFSMAVESGVHMLLSSFGADHHDHAHGGXXXXXXXXXXXXXGEDAEKGLTHSSLQQPRAAEGNYVSHPLTPDAHHSHNDDPKLNHQSLTFSETYIKSLWFVEPVAWITAIGDFFHAFTDGVVLAVAFKSCSTSLGWAVALGIVLHEVPHRVGDFFIYLKAGMVVPQALFVNFLASLASLLGAIILLAAGTVSAH-ALGYLMGFGCGALLFIGLSVLLPPML-------GVRDRRRVLLHFFWFSLGCILIGLSTLQHKHCDAEGSGLVHSH 545
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: A0A0P1AM43_PLAHL (Serine threonine protein phosphatase 2a n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM43_PLAHL) HSP 1 Score: 134 bits (336), Expect = 2.250e-28 Identity = 103/369 (27.91%), Postives = 176/369 (47.70%), Query Frame = 1 Query: 502 VTDAGAYALLLEHGG-GEVSTALISPFG--AAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYM-FATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTA-----GHSHTGAPATAKVVEADGSQSRGPTTP--TIPENLWELVQQRKGRALF----DFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGALIIGI 1563 V +AG YAL ++H E ++ G AVA S++E +E + A W +VA I S GIFLLI R+ L A + + GA+ A+ +HI+PES E + + L + V + + + + + H+H PAT + G Q+ P T + + Q ++F D++ +KP+ + +++GD H+F G I AFL+C ++G ++TAS ++HE+P E ADF+ L++ G + QA+ +N +S + A +GA+++LA TN + ++L +G+G+ ++I T+LLP L ++ G F L+ GI Sbjct: 126 VDEAGYYALHMQHDAVTEFGMQVLDAAGDEVAVALSLAEVAEENAETRSAR-------NATAAVWINTLVAVAIVTILSIVGIFLLIF-RVKFSTKLMDAMIALSAGALFGAAFLHILPESIEFYSAYGQMNFTLSMMFTVGFVVAMVVEMALELWVSLVQDGESHTHDHHPATIVLDHETGKQNVTPETGEYNAADTVSLSSQNETSVSVFSLKVDWQTIKPMAYIILLGDLFHNFVDGVLIATAFLACDDSLGISVTASAVLHELPQEFADFIILVDSGFTPFQAVLFNFLSALSAFVGAIVVLA-AVPVTNETMGLLLAVGSGTLVYIAGTDLLPGVLR-----------VKSFGYFVINLLMFGI 474
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: A0A6H5K199_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K199_9PHAE) HSP 1 Score: 131 bits (330), Expect = 3.590e-28 Identity = 93/303 (30.69%), Postives = 136/303 (44.88%), Query Frame = 1 Query: 754 NKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAKVVEAD-----------GSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTV--DGKGLG----DSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEG 1611 + ++A+ + LSH + FA+ A+LT L+HIIPES E L+D G+ G IL SI+I A+ +GH G+ P NLW LV +R+GR+LFD KGL+ +CWNVI G+ V +F G A +N +S +LGAV+I++L + ++ + + +LLG+GSFIFI T LLP L T G+ G + ++KLGSF GA + G L+F+ +C H G Sbjct: 10 STKVAHAIGLSHTFTFASDALLTTFLLHIIPESLEGIVAKHDHLHDAGLWAGPAILDRTGFSILIHALMESGHXXXXXXXXXXXXXXXXXXXXXXXXXAGTAPLALKGKVTPGNLWALVSERQGRSLFDLKGLQLVCWNVIAGELVRNFADG----------------------------------------------AFRFNFLSAPTCVLGAVVIISLRSKLSDADVWVTILLGSGSFIFIAPTGLLPGVLEVTKVESGRAGGAVTCNQVKKLGSFLHGAALTGGALIFNQYCEGEGSHIG 266 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1013.157.1 >prot_Ecto-sp13_S_contig1013.157.1 ID=prot_Ecto-sp13_S_contig1013.157.1|Name=mRNA_Ecto-sp13_S_contig1013.157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=412bp MDGEEDATVLASGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEback to top mRNA from alignment at Ecto-sp13_S_contig1013:14304..18765- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1013.157.1 ID=mRNA_Ecto-sp13_S_contig1013.157.1|Name=mRNA_Ecto-sp13_S_contig1013.157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4462bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1013:14304..18765- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1013:14304..18765- >mRNA_Ecto-sp13_S_contig1013.157.1 ID=mRNA_Ecto-sp13_S_contig1013.157.1|Name=mRNA_Ecto-sp13_S_contig1013.157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1236bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1013:14304..18765- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |