mRNA_Ecto-sp13_S_contig10125.154.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10125.154.1 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI) HSP 1 Score: 612 bits (1578), Expect = 5.310e-196 Identity = 363/398 (91.21%), Postives = 367/398 (92.21%), Query Frame = 1 Query: 1 RASLLGVSADDCGICQAGFVCYPGEPIPEQCYRGYYCPQGEDPIPCPIGTYNPLMEQDDRDDCNSCPAGYFCFSEGIGDHAQYPXXXXXXXLARETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTSNNTLWSRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSEEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSE 1194 RASLLGVSAD YRGYYCPQGEDPIPCPIGTYNPLMEQDDRDDCNSCPAGY+CFSEGIGDHAQYP L RETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPD+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTSNNTLWSRDDAC ECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTS EE+GGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECF+CPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSE Sbjct: 3118 RASLLGVSADXXXXXXXXXXXXXXXXXXXXXYRGYYCPQGEDPIPCPIGTYNPLMEQDDRDDCNSCPAGYYCFSEGIGDHAQYPCPAGSFCLVRETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTSNNTLWSRDDACDECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEEGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFICPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSE 3515
BLAST of mRNA_Ecto-sp13_S_contig10125.154.1 vs. uniprot
Match: A0A662XLD3_9STRA (Ephrin_rec_like domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLD3_9STRA) HSP 1 Score: 244 bits (622), Expect = 5.990e-68 Identity = 198/404 (49.01%), Postives = 236/404 (58.42%), Query Frame = 1 Query: 1 RASLLGVSADDCGICQAGFVCYPGEPIPEQCYRGYYCPQGEDPIPCPIGTYNPLMEQDDRDDCNSCPAGYFCFSEGIGDHAQYPXXXXXXXLARETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTS-NNTLWSRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSEEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEEC 1209 R G S DDCG C AG C G T+N Q +DC C AG C GI D Y L + P CP G++R +GA S E+C LC GG C G+V P IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + G T + S +C CPPGT+G D +R CD C GYVCLG T ++ PT E DGG+ C G YCP GS EI C GSY P+ + AS C +CP + YQ+ G A+CLPCS+S+ + + AT+C C+G +RAFQ+SDG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G CVS C Sbjct: 1722 RLETHGASVDDCGPCPAGMSCEDGANTVXXXXXXXXXXXXXXXXXX-XXTFNAYEGQAHLEDCVLCDAGKLCNRTGILDLTDYDCPPGSYCLRGSSTPRACPEGSFRAVSGAKSTEECSLCVGGSFCESGAVQPTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQIPCPLGYLGRQTPLDGAYTSLYSSCEACPPGTFGIDANRSRCDECLEGYVCLGATSSSHPTGRETDGGYPCPAGFYCPAGSSVEITCPRGSYQPQTKAPNASSCLLCPENSYQNAIGQASCLPCSTSAFAGSGATKCTCVGSHRAFQMSDGYCICEPGYEFYDQDMILRSDEDGEVDCQPIVYDRCGSNQVRSDSGSCVSSSGSAC 2124
BLAST of mRNA_Ecto-sp13_S_contig10125.154.1 vs. uniprot
Match: A0A067CMH4_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CMH4_SAPPC) HSP 1 Score: 238 bits (608), Expect = 4.350e-66 Identity = 203/405 (50.12%), Postives = 240/405 (59.26%), Query Frame = 1 Query: 1 RASLLGVSADDCGICQAGFVCYPGEPIPEQCYRGYYCPQGEDPIPCPIGTYNPLMEQDDRDDCNSCPAGYFCFSEGIGDHAQYPXXXXXXXLARETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTSNNTLWS-RDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSEEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNP-EVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEEC 1209 R S G DC C AG C G + C GYYCP + P PCP GT N D CPAG FC L D CPAGTY TTG +SV C +CP G++C GS+TP +XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L N +L+S R +AC CP GTYG + C CP G+VCL + TP + D G+ C G+YC G+++E PC G++NP +G+S + C C A+ YQ Q G A C PCS+SS + + +C+C+G NRAFQ SDG CIC GYEYY+ G+L S D DCQP+VY RC + + A G CV C Sbjct: 2406 RLSPFGTELYDCAACPAGKSCLDGT-VTVDCPVGYYCPYAQLPQPCPKGTVN--------DTAFDCPAGSFC-------------------LRGAPDASPCPAGTYLPTTGGSSVSSCRVCPAGYECPLGSITPIVXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLSLLRPNGSLYSSRSEACQLCPKGTYGNGAN---CTTCPEGFVCLEGCTSPTPRNASMDNGYPCPAGYYCGNGTFQEQPCPVGTFNPLTMGTSLNTSCMPCAANTYQYQVGQATCYPCSTSSNAALGSAQCQCVGQNRAFQKSDGYCICEPGYEYYDSNGILRSDSDDTADCQPVVYPRCGSSQVRSASGSCVDPSSVSC 2779
BLAST of mRNA_Ecto-sp13_S_contig10125.154.1 vs. uniprot
Match: A0A5D6XKV9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKV9_9STRA) HSP 1 Score: 232 bits (591), Expect = 7.750e-64 Identity = 195/398 (48.99%), Postives = 239/398 (60.05%), Query Frame = 1 Query: 1 RASLLGVSADDCGICQAGFVCYPGE-PIPEQCYRGYYCPQGEDPIPCPIGTYNPLMEQDDRDDCNSCPAGYFCFSEGIGDHAQYPXXXXXXXLARETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTSNNTLWSR-DDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSEEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICV 1188 R G S DCG+C AG C G IP YNP + +DC C AG C GI D Y LA E+ P QCP G +R G S +DC LC GG C GS+ P + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G T + ++ DAC CPPGT+G+DP RL C+ C G+VCLG T ++ P S E + G++C G YC GS E+ C G+Y G++ + C CP++ YQ+ G ++CLPCS S+ S A AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S D +DCQPIVY+RC + + G CV Sbjct: 2264 RLETHGSSVGDCGLCPAGMSCEDGAMTIPXXXXXXXXXXXXX--XXXXXXXYNPSEGKRVLEDCIPCAAGKLCNRTGIVDPTDYNCPPGHYCLAAESFPRQCPIGRFRRGAGGRSADDCQLCVGGSYCALGSIEPTVCESKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGRATPLSGAYTTLTDACESCPPGTFGSDPKRLRCETCSEGFVCLGATTSSRPISRELEKGYECPPGFYCQAGSSRELACPIGTYQSGSGATNVTFCRECPSNSYQNFAGQSSCLPCSKSAYSSAGATKCTCIGSHRAFQMTDGYCICEPGYEFYDQDLILRSDEDDDVDCQPIVYDRCGSNQVRSESGSCV 2659
BLAST of mRNA_Ecto-sp13_S_contig10125.154.1 vs. uniprot
Match: A0A0P1B283_PLAHL (Insulin-like growth factor binding protein, N-terminal n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B283_PLAHL) HSP 1 Score: 227 bits (579), Expect = 3.230e-62 Identity = 187/405 (46.17%), Postives = 228/405 (56.30%), Query Frame = 1 Query: 1 RASLLGVSADDCGICQAGFVCYPG-EPIPEQCYRGYYCPQGEDPIPCPIGTYNPLMEQDDRDDCNSCPAGYFCFSEGIGDHAQYPXXXXXXXLARETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTSNNTLW-SRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSEEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEEC 1209 R LG + DCG+C AG C G + IP T+N +++ +DC C AG C GI D Y T+P CP GTYR G S EDC LC G C G+ P + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + G T + + S +C C PGT+G+D +R CD C G+VCLG T T+ PTS E D G+ C G YCP GS EI C G+Y P AS C +CP + YQ+ EG CLPCSSS+ + + +C C G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY RC + + +G CVS + C Sbjct: 3123 RIQTLGAALSDCGLCPAGKSCTDGIKTIPXXXXXXXXXXXXX--XXXXXXTFNGAQGKENLEDCRPCDAGKLCNRTGIIDLGGYDCPSGHFCHRGSTEPSPCPDGTYRAFAGGKSPEDCLLCIEGSFCRAGAAQPIVCDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAQIPCPLGFRGRATPLDGAYISLYTSCEACSPGTFGSDFNRTRCDQCLEGFVCLGATTTSHPTSPEADRGYPCPPGFYCPAGSSLEIACPRGTYQPSYEGKNASACLLCPDNTYQNLEGQTTCLPCSSSAYAGTGSAKCSCAGSHRAFQMTDGYCICEPGYEFYDQNMILRSDEDGEVDCQPIVYARCSSSQVRSDNGSCVSASGKVC 3525
BLAST of mRNA_Ecto-sp13_S_contig10125.154.1 vs. uniprot
Match: A0A329SQQ8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SQQ8_9STRA) HSP 1 Score: 224 bits (572), Expect = 2.740e-61 Identity = 183/425 (43.06%), Postives = 224/425 (52.71%), Query Frame = 1 Query: 91 CYRGYYCPQGE-DPIPCPIGTYNPLMEQDDRDDCNSCPAGYFCFS--------------------------------------------------EGIGDHAQYPXXXXXXXLARETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTS-NNTLWSRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSEEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEEC 1209 C GYYCP+G DP PCP + DC+ CPAG C GI D Y L +P+ CPAG YR +GA S +DC C GG C G P + XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXX+ G T + S +C CPPGT+G D +R CD C G+VCLG T ++ PTS E D G+ C G+YCP GS EI C G+Y P +S S C +CP + YQ+ EG A+CLPCS+S+ + AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G CVS + C Sbjct: 2187 CPIGYYCPEGVLDPFPCPKNSSRLQTLGIAESDCDPCPAGKSCNDGTNTVXXXXXXXXXXXXXXXXXXXXTFNGAEGKANQEXXXXXXXXXXXNRTGILDLTDYDCPPGNYCLRGSFEPQPCPAGQYRAVSGAKSSDDCLQCIGGSYCEAGVTQPTVCNATTYCPVGVGSPRLXXXXXXXXXXXXXXXXXXXXXXXSPAXXXXXXXXXXXXXXXXXXXXXXXXXXYLGRTTPLDGAYTSLYSSCEACPPGTFGIDVNRTRCDECLEGFVCLGATNSSHPTSREVDRGYPCPTGYYCPAGSSSEIACPRGTYQPSYKASNESACLLCPENSYQNSEGQASCLPCSTSAFAGTGATKCTCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQPIVYDRCSSNQVRSDSGSCVSASGKAC 2611
BLAST of mRNA_Ecto-sp13_S_contig10125.154.1 vs. uniprot
Match: D0MZ33_PHYIT (Ephrin_rec_like domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MZ33_PHYIT) HSP 1 Score: 224 bits (570), Expect = 5.040e-61 Identity = 179/425 (42.12%), Postives = 221/425 (52.00%), Query Frame = 1 Query: 91 CYRGYYCPQGE-DPIPCPIGTYNPLMEQDDRDDCNSCPAG--------------------------------------------------YFCFSEGIGDHAQYPXXXXXXXLARETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTS-NNTLWSRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSEEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEEC 1209 C GYYCP+G DPIPCP + DCN CPAG C GI D Y +P+ CPAG YR GA S +DC C GG C G + P + XXXXXXXXXXXXXXXXXXXX XX XXXXXXXXXXXXXXXXXXXXXXXX+ G T + S +C CPPGT+G D +R CD C G+VCLG T ++ PTS E D G+ C G+YCP GS EI C G+Y P +S S C +CP + YQ+ G ++CLPCS+S+ + AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G+CVS + C Sbjct: 1920 CPIGYYCPEGVLDPIPCPKNSSRLQTLGIAESDCNPCPAGKSCDDGTSTVXXXXXXXXXXXXXXXXXXXXXYNGAEGMANQEDXXXXXXXXXCNRTGILDLTDYDCPPGNYCPRGSFEPQPCPAGKYRALRGAKSSDDCSQCIGGSYCEAGVILPTVCNATTYCPEGVGSPRLXXXXXXXXXXXXXXXXXXXXFXXSPAVAXXXXXXXXXXXXXXXXXXXXXXXXYLGRTTPLDGAYTSLYSSCEACPPGTFGIDVNRTRCDECLEGFVCLGATNSSHPTSREVDRGYPCPPGYYCPTGSSSEIACPRGTYQPNYKASNVSACLLCPENSYQNSVGQSSCLPCSTSAFAGTGATKCMCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQPIVYDRCSSSQVRSDSGLCVSASGKAC 2344
BLAST of mRNA_Ecto-sp13_S_contig10125.154.1 vs. uniprot
Match: A0A6G0S9T2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0S9T2_9STRA) HSP 1 Score: 218 bits (554), Expect = 6.730e-59 Identity = 190/425 (44.71%), Postives = 233/425 (54.82%), Query Frame = 1 Query: 91 CYRGYYCPQGE-DPIPCPIGTYNPLMEQDDRDDCNSCPAGYFC--------------------------------------------------FSEGIGDHAQYPXXXXXXXLARETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTS-NNTLWSRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSEEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEEC 1209 C GYYCP+G DPIPCP + DC+ CPAG C GI D Y L ++P C AGT+R S +DC C G C G+ P +X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XX XXXXXXXXXXXXXXXXXXXXXXXX + G T + S D +C C PGT+G D +R CD C GYVCLG T ++ P S E D G+ C G+YCP GS EI C +G+Y P +S AS C +CPA+ YQ+ G ++CLPCS+S+ + A AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G CVS + C Sbjct: 1691 CPIGYYCPEGVLDPIPCPKNSSRLETLGIALTDCDPCPAGKSCNDGTKTVXXXXXXXXXXXXXXXXXXXXTFNGAEGKANLEXXXXXXXXXXXXRTGIIDLTDYDCPPGSFCLRGSSEPHACAAGTFRAVGAGKSSDDCATCIRGSYCEAGATQPQVXNATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFXXSPGVXXXXXXXXXXXXXXXXXXXXXXXXGYLGRTTPLDGAYTSLDSSCEACEPGTFGIDANRTRCDECLEGYVCLGATNSSHPESRELDRGYPCPPGYYCPAGSSSEIACPSGTYQPIYKASNASACLLCPANSYQNAPGQSSCLPCSTSAYAGAGATKCTCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQPIVYDRCSSSQVRSDSGSCVSASGKAC 2115
BLAST of mRNA_Ecto-sp13_S_contig10125.154.1 vs. uniprot
Match: A0A6G0M0R9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0M0R9_9STRA) HSP 1 Score: 218 bits (554), Expect = 6.800e-59 Identity = 189/425 (44.47%), Postives = 232/425 (54.59%), Query Frame = 1 Query: 91 CYRGYYCPQGE-DPIPCPIGTYNPLMEQDDRDDCNSCPAGYFC--------------------------------------------------FSEGIGDHAQYPXXXXXXXLARETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTS-NNTLWSRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSEEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEEC 1209 C GYYCP+G DPIPCP + DC+ CPAG C GI D Y L ++P C AGT+R S +DC C G C G+ P +X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XX XXXXXXXXXXXXXXXXXXXXXXX + G T + S D +C C PGT+G D +R CD C GYVCLG T ++ P S E D G+ C G+YCP GS EI C +G+Y P +S AS C +CPA+ YQ+ G ++CLPCS+S+ + A AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G CVS + C Sbjct: 3101 CPIGYYCPEGVLDPIPCPKNSSRLETLGIALTDCDPCPAGKSCNDGTKTVXXXXXXXXXXXXXXXXXXXXTFNGAEGKANLEXXXXXXXXXXXXRTGIIDLTDYDCPPGSFCLRGSSEPHACAAGTFRAVGAGKSSDDCATCIRGSYCEAGATQPQVXNATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFXXSLGVXXXXXXXXXXXXXXXXXXXXXXXLGYLGRTTPLDGAYTSLDSSCEACEPGTFGIDANRTRCDECLEGYVCLGATNSSHPESRELDRGYPCPPGYYCPAGSSSEIACPSGTYQPIYKASNASACLLCPANSYQNAPGQSSCLPCSTSAYAGAGATKCTCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQPIVYDRCSSSQVRSDSGSCVSASGKAC 3525
BLAST of mRNA_Ecto-sp13_S_contig10125.154.1 vs. uniprot
Match: W2R4U9_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2R4U9_PHYPN) HSP 1 Score: 217 bits (552), Expect = 1.250e-58 Identity = 176/404 (43.56%), Postives = 218/404 (53.96%), Query Frame = 1 Query: 1 RASLLGVSADDCGICQAGFVCYPGEPIPEQCYRGYYCPQGEDPIPCPIGTYNPLMEQDDRDDCNSCPAGYFCFSEGIGDHAQYPXXXXXXXLARETDPEQCPAGTYRNTTGAASVEDCPLCPGGFQCHEGSVTPDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGSLTS-NNTLWSRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSEEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEEC 1209 R LG++ DC C AG C G T+N + +R+DC AG C GI D Y L +P CPAG YR +GA S +DC C GG C G+ P + XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX G T + S +C CPPGT+G D +R CD C G+VCLG T ++ PTS E D G+ C GHYCP GS EI C G+Y P +S AS C C + YQ+ EG + +S+ + AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G+CVS + C Sbjct: 3093 RLQTLGIAESDCDPCPAGKSCNDGSNTVXXXXXXXXXXXXXXXXXX-XXTFNGAEGKANREDCLPXDAGKLCSRTGILDLTDYDCPPGNYCLRGSFEPHPCPAGKYRAVSGAKSADDCSQCIGGSYCETGATQPTVCNATTHCPAGVGSPLLXXXXXXXXXXXXXXXXXXXXXXXSPAXXXXXXXXXXXXXXXXXXXXXXXXXGHLGRTTPLDGAYTSLYSSCEACPPGTFGIDVNRTRCDGCLEGFVCLGATNSSHPTSREVDRGYPCPPGHYCPAGSSLEIACPRGTYQPNYKASKASACLPCTENSYQNSEGQGSXXXXXTSAFAGTGATKCTCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQPIVYDRCGSNQVRSDSGLCVSASGKAC 3495 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10125.154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10125.154.1 >prot_Ecto-sp13_S_contig10125.154.1 ID=prot_Ecto-sp13_S_contig10125.154.1|Name=mRNA_Ecto-sp13_S_contig10125.154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=403bp RASLLGVSADDCGICQAGFVCYPGEPIPEQCYRGYYCPQGEDPIPCPIGTback to top mRNA from alignment at Ecto-sp13_S_contig10125:2349..5833+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10125.154.1 ID=mRNA_Ecto-sp13_S_contig10125.154.1|Name=mRNA_Ecto-sp13_S_contig10125.154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3485bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10125:2349..5833+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10125:2349..5833+ >mRNA_Ecto-sp13_S_contig10125.154.1 ID=mRNA_Ecto-sp13_S_contig10125.154.1|Name=mRNA_Ecto-sp13_S_contig10125.154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1209bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10125:2349..5833+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |