mRNA_Ecto-sp13_S_contig10119.150.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10119.150.1 vs. uniprot
Match: D7G365_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G365_ECTSI) HSP 1 Score: 213 bits (542), Expect = 3.540e-59 Identity = 115/228 (50.44%), Postives = 141/228 (61.84%), Query Frame = 3 Query: 687 VIALLAENSRVYHADDYIYDNQGWKASAQEAMKEGWNGILATEYIHSLERNLNVDLSSLGGNTQAFAVFSEVYTQLVHLRSDGFWTGLLLDDVDLE-----PVLHNPNRYSW--------------------------ESAAVDAGVTPASIRDALGVRGDDSHGMVQLADAVGD-CTDDIEDLLYLAQTFSMVKALEMNRDGSVQAAEFHPESNDETMDMRTCAASA 1274 +IALLAENSRV+HAD+YIY + GWK SAQEAMKEGWN I++ EY+ SLE NLNVDL L G QAF + SE+Y QL LRSDG WT LLLD+ P LHNPNR SW ESAA+DAG+TP+ IR+ LG+ G DS VQLAD VG C D+ED++YLA +V+ +E+N DGSV+A + + DE + R C A Sbjct: 143 IIALLAENSRVHHADEYIYGDHGWKVSAQEAMKEGWNAIVSPEYVRSLEENLNVDLGGLEGIIQAFDLLSELYAQLYDLRSDGLWTSLLLDNSSFGGSADGPTLHNPNRDSWVRAAFVFGVKPVWMSCYCVVQRPGDKESAALDAGLTPSRIREILGLDGGDSTATVQLADLVGTGCDGDVEDVVYLADALGLVETIELNADGSVEAVQLCAAAEDEPIATRICKVDA 370
BLAST of mRNA_Ecto-sp13_S_contig10119.150.1 vs. uniprot
Match: A0A6C0JAQ4_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JAQ4_9ZZZZ) HSP 1 Score: 156 bits (394), Expect = 8.080e-37 Identity = 105/346 (30.35%), Postives = 160/346 (46.24%), Query Frame = 3 Query: 12 PRSGMSNQLGLYTRTRGEDYMCSTCTTCDLKDYTGSYHVSISLPKDPNGWVLYNESALTKDGSTCSETYVREFDDSETPVGVWVDAHMNFANMVQWIEPLLMAVFGSPDADAVCDDGKFIEGSYRTMSAGWGVPGTTDVRTFTTNGTGRYAQYGFDWLLEVAPSPHAGIFGCTE-------------EGMGSDIRTKSSVDEHLMAPGSELPPMDVGQGLEIRVFDNFPIKNMKSVYRVIALLAENSRVYHADDYIYDNQGWKASAQEAMKEGWNGILATEYIHSLERNLNVDLSSLGGNTQAFAVFSEVYTQLVHLRSDGFWTGLLLDDVDLEPVLHNPNRYSWE 1010 P GMS+ + R ++Y KDY GSYH++++LP N L+K ++D H NFANM+QWIEPL++ F S D ++ K + GSYR + GWG +DVR G GRY+ W + I C + G S+ RT S D M +G G+E+R+FD+FPIK + S+ ++I+L+AENSRV+ DY+Y N+GW + +E MK GW L + + L + L++ L++ + A+ + +Y +L S G + +L+ D L NR S+E Sbjct: 159 PPFGMSSYIKTSENYRSKNYKLRPKL---YKDYCGSYHITLTLPYKKN-------MKLSK----------------------FIDIHKNFANMIQWIEPLMITAFFSADDKSMGTSKKKVRGSYRVVRTGWGNLAGSDVRKLD-KGIGRYSNIPSYWRKGLTFDEQKMINYCKDLSPVLKKREPGAKAGFSSNFRTFGSTDPDRPEHRESGIGMTIGNGIELRIFDHFPIKYLNSLLQLISLIAENSRVHKCTDYVYKNKGWIHAVKEIMKYGWCAKLTNGFKNKLRKMLDIPLAT--SSLIAYDIMKTLYKELYDKNSKGDYYIILVGDNKKYIELPEINRKSFE 469
BLAST of mRNA_Ecto-sp13_S_contig10119.150.1 vs. uniprot
Match: A0A7S4ID32_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ID32_9STRA) HSP 1 Score: 145 bits (365), Expect = 4.140e-35 Identity = 100/276 (36.23%), Postives = 144/276 (52.17%), Query Frame = 3 Query: 612 MDVGQGLEIRVFDNFPIKNMKSVYRVIALLAENSRVYHADDYIYDNQGWKASAQEAMKEGWNGILATEYIHSL---------ERNLNVDLSSLGGNTQAFAVFSEVYTQLVHLRSDGFWTGLLLDDVD-LEPVLHNPNRYSWESAAVDAG---------VTPASIRDA---------LGVRG------DDSHGMVQLAD--------AVGDC-TDDIEDLLYLAQTFSMVKALEMNRDGSVQAAE-------FHPESNDETMDM-------RTCAA 1268 M+ G G+E+ + DNF I+++ VYR++AL+AE R A +YIYD++ W A+ ++ MKEGWN IL +Y+ L E+ VD S L G TQAF VFS VY L +DGFWT LLL++V + P NPNR SWE AA G + P RD+ +RG D +V +++ + G C +D+EDL+YLAQ++ M+K L + DG+V+ F ++N + DM RTCA+ Sbjct: 7 MEPGDGVELTILDNFGIEHLPQVYRLLALIAEAGRTRTASNYIYDDESWIAAIRQVMKEGWNAILPADYVSGLCAALGIEEEEKEALVD-SKLRGTTQAFEVFSAVYGALWEAHADGFWTRLLLENVPKVMPEPSNPNRDSWEMAAAHDGFNVERLYRYLVPGDFRDSPPADSVKSGRRIRGAAAAAEDLRRPVVSVSELRAAYLNFSPGACGVEDVEDLIYLAQSYGMIKELVLEDDGTVRRFTLRDPRELFWRDANARSDDMPEYLIYERTCAS 281
BLAST of mRNA_Ecto-sp13_S_contig10119.150.1 vs. uniprot
Match: A0A5B8IGP8_9VIRU (Uncharacterized protein n=1 Tax=Mimiviridae sp. ChoanoV1 TaxID=2596887 RepID=A0A5B8IGP8_9VIRU) HSP 1 Score: 149 bits (376), Expect = 3.130e-34 Identity = 101/326 (30.98%), Postives = 153/326 (46.93%), Query Frame = 3 Query: 105 DYTGSYHVSISLPKDPNGWVLYNESALTKDGSTCSETYVREFDDSETPVGVWVDAHMNFANMVQWIEPLLMAVFGSPDADAVC--DDGKFIEGSYRTMSAGWGVPGTTDVRTFTTNGTGRYAQYGFDWLLEVAPSPHAGIFGCTEEG------------MGSDIRTK----SSVDEHLMAPGSELPPMDVGQ-----GLEIRVFDNFPIKNMKSVYRVIALLAENSRVYHADDYIYDNQGWKASAQEAMKEGWNGILATEYIHSLERNLNVDLSSLGGNTQAFAVFSEVYTQLVHLRSDGFWTGLLLDDVDLE-PVLHNPNRYSWE 1010 DYTGSYHV+I+LP C E + +++ ++ H NFAN QWIEPLL+A S D + D K I GS+R ++ GWG ++VR T+G GRY+ W + + + C E+ + SDIRT S E P + G G+EIR+FD+F ++ + R + L+EN+R++ +Y+Y N WK + + MK GW IL+ +YI L +NLN++L+ N AF + +L +GF+ LL++ E P L NR+SW+ Sbjct: 259 DYTGSYHVTITLP--------------------CREN-ISDYE--------FIKLHQNFANQFQWIEPLLLASLFSGDPRTITEKDYNKKIRGSFRILATGWGNLAGSNVRKLGTSGVGRYSNIESVWRKGLNFNSTKKLMECDEKAKKNKNLKKRGSILSSDIRTFNFDFSDKCSERTGRSDECPKVSGGNMVHPNGMEIRIFDHFNSVHLIDLLRFMVYLSENARLFETKNYVYSNLTWKTAVRNIMKNGWRAILSDKYIDELRKNLNLELNFK--NKTAFGFLEALNEELFMNHKNGFFPSLLIEKKYREAPDLPELNRFSWQ 553
BLAST of mRNA_Ecto-sp13_S_contig10119.150.1 vs. uniprot
Match: A0A2L2DIJ5_MIMIV (Uncharacterized protein n=9 Tax=Mimivirus TaxID=315393 RepID=A0A2L2DIJ5_MIMIV) HSP 1 Score: 82.8 bits (203), Expect = 7.840e-13 Identity = 64/300 (21.33%), Postives = 124/300 (41.33%), Query Frame = 3 Query: 114 GSYHVSISLPKDPNGWVLYNESALTKDGSTCSETYVREFDDSETPVGVWVDAHMNFANMVQWIEPLLMAVFGSPDADAVCDDGKFIEGSYRTMSAGWGVPGTTDVRTFTTNGTGRYAQYGFDWLLEVAPSPHAGIFGCTEEGMGSDIRTKSSVDEHLMAPGSELPPMDVGQGLEIRVFDNFPIKNMKSVYRVIALLAENSRVYHADDYIYDNQGWKASAQEAMKEGWNGILATEYIHSLERNLNVDLSSLGGNTQAFAVFSEVYTQLVHLRSDGFWTGLLLDDVDLEPVLHNPNRYSWES 1013 G+YH++I++P N L ++ +++ H N +++WIEP ++A++GSPD + D+ K+ GS R ++ + GT D +T + L S + I+ T+ G +I + +HL G+E R+ D FP +KS+ + LL ++S Y++ W + ++ G+N + + I +L ++L + NT + + +H + L+ +P+L+N N+Y WE+ Sbjct: 213 GTYHINITIPTKLNNQGLIDDKIK------------------------FIEQHCNAIKLIKWIEPFIIALYGSPDVFSFNDESKYSAGSLRLTASRYVSIGTFDAKTMKIGKQLNDIKTIMPVYLNDK-SWYNKIYNITDYKPGDNIGYDINYSKHL------------NSGIEFRILDFFPEIALKSLLDFLILLLDHSLQNDIKISCYESDEWHEFTKNSLLYGYNARIPYKLIITLHKSLGFPII----NTSNISTYLLQLIDFLHNKYANSTCSKLMSPDMSKPILYNVNQYMWEN 471
BLAST of mRNA_Ecto-sp13_S_contig10119.150.1 vs. uniprot
Match: M1PC85_9VIRU (Uncharacterized protein n=1 Tax=Moumouvirus goulette TaxID=1247379 RepID=M1PC85_9VIRU) HSP 1 Score: 79.3 bits (194), Expect = 9.670e-12 Identity = 70/307 (22.80%), Postives = 128/307 (41.69%), Query Frame = 3 Query: 114 GSYHVSISLPKDPNGWVLYNESALTKDGSTCSETYVREFDDSETPVGVWVDAHMNFANMVQWIEPLLMAVFGSPDADAVCDDGKFIEGSYRTMSAGWGVPGTTDVRTFTTNG------TGRYAQ-YGFDWLLEVAPSPHAGIFGCTEEGMGSDIRTKSSVDEHLMAPGSELPPMDVGQGLEIRVFDNFPIKNMKSVYRVIALLAENSRVYHADDYIYDNQGWKASAQEAMKEGWNGILATEYIHSLERNLNVDLSSLGGNTQAFAVFSEVYTQLVHLRSDGFWTGLLLDDVDLEPVLHNPNRYSWES 1013 G+YH++I++P + L + GS D+ E +++ H N +++WIEP ++A++GSPD + D+GK+ GS R ++ + GT D + T T YA Y W + I+ T+ +I + +HL G+E+R+ D FP + ++++ I LL ++S + Y++ W + + G+ + + + L R L L NT + ++ + + L+ +P LHN NRY WE+ Sbjct: 212 GTYHINITMP-----------TKLNEYGS---------IDNKED----FLNKHKNAIKIIKWIEPFIVALYGSPDVFSFEDNGKYSSGSLRLTASRYVSIGTYDTKIMKTGKQLNDLKTLMYAYLYDKSWYNK--------IYSVTDYKQVENIGYDINYAKHL------------NSGIELRILDYFPEECLENLINFIILLLDHSLENKINISCYESDEWHEFTKNVLLYGYTSKIPFKLLIILNRILKFPLI----NTSDVVTYINSLIDYLYSKYNNSNCSSLMSPNMKKPKLHNVNRYMWEN 470
BLAST of mRNA_Ecto-sp13_S_contig10119.150.1 vs. uniprot
Match: A0A8K1T113_9VIRU (Uncharacterized protein n=1 Tax=Megavirus baoshan TaxID=2496520 RepID=A0A8K1T113_9VIRU) HSP 1 Score: 77.8 bits (190), Expect = 3.000e-11 Identity = 63/305 (20.66%), Postives = 124/305 (40.66%), Query Frame = 3 Query: 114 GSYHVSISLPKDPNGWVLYNESALTKDGSTCSETYVREFDDSETPVGVWVDAHMNFANMVQWIEPLLMAVFGSPDADAVCDDGKFIEGSYRTMSAGWGVPGTTDVRTFTTNGTGRYAQ-----YGFDWLLEVAPSPHAGIFGCTEEGMGSDIRTKSSVDEHLMAPGSELPPMDVGQGLEIRVFDNFPIKNMKSVYRVIALLAENSRVYHADDYIYDNQGWKASAQEAMKEGWNGILATEYIHSLERNLNVDLSSLGGNTQAFAVFSEVYTQLVHLRSDGFWTGLLLDDVDLEPVLHNPNRYSWES 1013 G+YH++I++P N L ++ +++ H N +++WIEP ++A++GSPD + D+ K+ GS R ++ + GT D +T + Y +D S + I+ T+ G DI + +HL G+E R+ D FP +KS+ + LL ++S Y++ W + ++ G+ + + + + ++L + NT + + +H + L+ +P+L+N N+Y WE+ Sbjct: 213 GTYHINITMPTKLNDQGLIDDKIK------------------------FMEQHRNAIKIIKWIEPFIIALYGSPDVFSFNDNFKYSGGSLRLTASRYVSIGTFDTKTMKIGKQLNDIKTIMPIYSYD------KSWYNKIYNVTDYKPGDDIGYDINYSKHL------------NSGIEFRILDFFPEIALKSLIDFLILLLDHSLENDIKISCYESDEWHEFTKNSLLYGYTAHVPYKLVVIMHKSLGFPII----NTSNISTYMSQLIDFLHNKYMNSTCSKLMSPNMSKPILYNINQYMWEN 471
BLAST of mRNA_Ecto-sp13_S_contig10119.150.1 vs. uniprot
Match: L7RBX7_9VIRU (Uncharacterized protein n=3 Tax=Moumouvirus TaxID=985782 RepID=L7RBX7_9VIRU) HSP 1 Score: 75.9 bits (185), Expect = 1.210e-10 Identity = 64/301 (21.26%), Postives = 125/301 (41.53%), Query Frame = 3 Query: 114 GSYHVSISLPKDPNGWVLYNESALTKDGSTCSETYVREFDDSETPVGVWVDAHMNFANMVQWIEPLLMAVFGSPDADAVCDDGKFIEGSYRTMSAGWGVPGTTDVRTFTTNGT-GRYAQYGFDWLLEVAPSPHAGIFGCTEEGMGSDIRTKSSVDEHLMAPGSELPPMDVGQGLEIRVFDNFPIKNMKSVYRVIALLAENSRVYHADDYIYDNQGWKASAQEAMKEGWNGILATEYIHSLERNLNVDLSSLGGNTQAFAVFSEVYTQLVHLRSDGFWTGLLLDDVDLEPVLHNPNRYSWES 1013 G+YH++I++P NE+ L + DD +++ H N +++WIEP ++A++GSPD + D+ K+ GS R ++ + GT D + T F +L + S + I+ T+ +I + +HL G+E R+ D +P + ++ + + LL ++S + Y++ W + + +G+ + + + +L + L L NT + ++ + L+ +P LHN NRY WE+ Sbjct: 213 GTYHINITMP------TKLNENGL-----------IENKDD-------FLNKHKNAIKIIKWIEPFIIALYGSPDVFSFEDNNKYSSGSLRLTASRYVSIGTYDTKVMKTGKQLNDLKTTMFTYLYDK--SWYNKIYNITDYKQVDNIGYDINYAKHL------------NSGIEFRILDYYPEECLEDLINFMILLLDHSLENKINISCYESDEWHEFTKNVLLDGYTSKIPYKLLITLNKILKFPLI----NTYNVTTYINSLIDFLYAKYKNGPCSSLMSPNMKKPKLHNVNRYMWEN 471
BLAST of mRNA_Ecto-sp13_S_contig10119.150.1 vs. uniprot
Match: A0A650DA61_9VIRU (Uncharacterized protein n=3 Tax=Moumouvirus TaxID=985782 RepID=A0A650DA61_9VIRU) HSP 1 Score: 75.5 bits (184), Expect = 1.570e-10 Identity = 67/310 (21.61%), Postives = 126/310 (40.65%), Query Frame = 3 Query: 114 GSYHVSISLPKDPNGWVLYNESALTKDGSTCSETYVREFDDSETPVGVWVDAHMNFANMVQWIEPLLMAVFGSPDADAVCDDGKFIEGSYRTMSAGWGVPGTTDVRTF----------TTNGTGRYAQYGFDWLLEVAPSPHAGIFGCTEEGMGSDIRTKSSVDEHLMAPGSELPPMDVGQGLEIRVFDNFPIKNMKSVYRVIALLAENSRVYHADDYIYDNQGWKASAQEAMKEGWNGILATEYIHSLERNLNVDLSSLGGNTQAFAVFSEVYTQLVHLRSDGFWTGLLLDDVDLEPVLHNPNRYSWES 1013 G+YH++I++P NES L ++ E ++ + H N +++W+EP ++A++GSPD + DD K+ GS R ++ + GT D + TT T Y + ++ + + + +G DI + +HL G+E R+ D FP + ++ + I LL ++S + Y++ W + + +G+ + + I L + L L NT + ++ + L+ ++P LHN NRY WE+ Sbjct: 212 GTYHINITIP------TKLNESGLIEN----EEEFLVK--------------HKNAIKIIKWMEPFIIALYGSPDVFSFEDDKKYSSGSLRLTASRYVSIGTYDTKIMKKGKQLNDPKTTMFTYLYDKSWYNKIYSITDYKQV-------DNIGYDI----NYAKHL------------NSGIEFRILDYFPEECLQDLINFIILLLDHSLENKINISCYESDEWHEFTKNVLLDGYTSKIPYKLIIILNKVLKFPLI----NTSNIISYINSLIDFLYTKHKNGTCSSLMSPNMVKPKLHNVNRYMWEN 470
BLAST of mRNA_Ecto-sp13_S_contig10119.150.1 vs. uniprot
Match: A0A6N1NNN9_9VIRU (Uncharacterized protein n=1 Tax=Tupanvirus soda lake TaxID=2126985 RepID=A0A6N1NNN9_9VIRU) HSP 1 Score: 72.0 bits (175), Expect = 1.960e-9 Identity = 66/307 (21.50%), Postives = 124/307 (40.39%), Query Frame = 3 Query: 114 GSYHVSISLPKDPNGWVLYNESALTKDGSTCSETYVREFDDSETPVGVWVDAHMNFANMVQWIEPLLMAVFGSPDADAVCDDGKFIEGSYRTMSAGWGVPGTTDV------RTFTTNGTGRYAQ-YGFDWLLEVAPSPHAGIFGCTEEGMGSDIRTKSSVDEHLMAPGSELPPMDVGQGLEIRVFDNFPIKNMKSVYRVIALLAENSRVYHADDYIYDNQGWKASAQEAMKEGWNGILATEYIHSLERNLNVDLSSLGGNTQAFAVFSEVYTQLVHLRSDGFWTGLLLDDVDLEPVLHNPNRYSWES 1013 G+YH++I++P +++A D + ++ + H N +++WIEPLL+A++GSPD + D+GK+ GS R ++ + GT + + T +A Y W + I+ T G I + +H A G+E R+FD FP + + + I LL +++ Y+ Q W + +G+ G + + I S + + + FA+ + ++ + G + + +P LHN N+Y WE+ Sbjct: 213 GTYHINITIP------TKLDDNANIAD------------------LNLFENQHRNVVRLLKWIEPLLIAIYGSPDVFSFEDNGKYSAGSLRLTASRYISIGTYNSVLMKKGKLLQDTKTNMHAYLYKKSWYNQ--------IYKTTNYVQGDQIGYDINYCKHYNA------------GIEFRIFDYFPEEALTDIINFIVLLLDHALENEIKISCYECQEWHNFTATVLHDGYIGKIPHQMIMSYHKIVGFPMIIEPTIKDYFAILIDY----LYKKYCGSYCSANMSPGMKKPRLHNVNQYMWEN 471 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10119.150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10119.150.1 >prot_Ecto-sp13_S_contig10119.150.1 ID=prot_Ecto-sp13_S_contig10119.150.1|Name=mRNA_Ecto-sp13_S_contig10119.150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp MSNQLGLYTRTRGEDYMCSTCTTCDLKDYTGSYHVSISLPKDPNGWVLYNback to top mRNA from alignment at Ecto-sp13_S_contig10119:622..3991+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10119.150.1 ID=mRNA_Ecto-sp13_S_contig10119.150.1|Name=mRNA_Ecto-sp13_S_contig10119.150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3370bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10119:622..3991+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10119:622..3991+ >mRNA_Ecto-sp13_S_contig10119.150.1 ID=mRNA_Ecto-sp13_S_contig10119.150.1|Name=mRNA_Ecto-sp13_S_contig10119.150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10119:622..3991+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |