Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 410 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 387 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462508.907697-UTR-Ecto-sp13_S_contig10118:5255..5278 | 1681462508.907697-UTR-Ecto-sp13_S_contig10118:5255..5278 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10118 5256..5278 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462508.917565-CDS-Ecto-sp13_S_contig10118:5278..5665 | 1681462508.917565-CDS-Ecto-sp13_S_contig10118:5278..5665 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10118 5279..5665 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10118.149.1 >prot_Ecto-sp13_S_contig10118.149.1 ID=prot_Ecto-sp13_S_contig10118.149.1|Name=mRNA_Ecto-sp13_S_contig10118.149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp
MDEVGGREEHEGGSRRNLGRLLRHARFCTALGAGMRQADGAALRPPTRPP
ADDEPLPLKRSREPDQRPRSAGNRDSPLAVPTRRGPRYSRPRHPHPAAPR
PRDGLDVRPRYCPPGGSSHHYYPDTRPR* back to topmRNA from alignment at Ecto-sp13_S_contig10118:5256..5665+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10118.149.1 ID=mRNA_Ecto-sp13_S_contig10118.149.1|Name=mRNA_Ecto-sp13_S_contig10118.149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=410bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10118:5256..5665+ (Ectocarpus species13 EcNAP12_S_4_19m)
CACACCGGAGACAGGTTTAGTGCATGGATGAGGTAGGTGGGCGGGAGGAA
CATGAGGGGGGAAGCAGAAGAAACTTGGGGCGGTTGCTCAGACACGCGAG
GTTTTGCACTGCTCTCGGGGCTGGGATGCGGCAGGCAGACGGTGCAGCGC
TTCGACCTCCGACAAGGCCTCCTGCTGATGACGAACCCCTCCCGTTGAAG
AGGTCGAGAGAACCTGATCAACGCCCCCGCTCCGCTGGTAACCGTGACTC
CCCCCTTGCTGTTCCCACCCGCCGCGGCCCTCGCTACTCCCGGCCCCGTC
ATCCCCACCCTGCTGCCCCCCGCCCTCGTGACGGCCTGGATGTCCGTCCC
CGCTACTGCCCCCCGGGCGGCTCCAGCCACCATTATTACCCCGATACACG
CCCCCGCTAG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10118:5256..5665+ >mRNA_Ecto-sp13_S_contig10118.149.1 ID=mRNA_Ecto-sp13_S_contig10118.149.1|Name=mRNA_Ecto-sp13_S_contig10118.149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=387bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10118:5256..5665+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGATGAGGTAGGTGGGCGGGAGGAACATGAGGGGGGAAGCAGAAGAAA
CTTGGGGCGGTTGCTCAGACACGCGAGGTTTTGCACTGCTCTCGGGGCTG
GGATGCGGCAGGCAGACGGTGCAGCGCTTCGACCTCCGACAAGGCCTCCT
GCTGATGACGAACCCCTCCCGTTGAAGAGGTCGAGAGAACCTGATCAACG
CCCCCGCTCCGCTGGTAACCGTGACTCCCCCCTTGCTGTTCCCACCCGCC
GCGGCCCTCGCTACTCCCGGCCCCGTCATCCCCACCCTGCTGCCCCCCGC
CCTCGTGACGGCCTGGATGTCCGTCCCCGCTACTGCCCCCCGGGCGGCTC
CAGCCACCATTATTACCCCGATACACGCCCCCGCTAG back to top
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