mRNA_Ecto-sp13_S_contig101167.148.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig101167.148.1 vs. uniprot
Match: A0A6H5KM35_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM35_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.230e-22 Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 1 Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTAGDAATE 156 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPT GDAATE Sbjct: 10 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTVGDAATE 61
BLAST of mRNA_Ecto-sp13_S_contig101167.148.1 vs. uniprot
Match: D8LQC6_ECTSI (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC6_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 3.120e-21 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 1 Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTAGDAATE 156 KVSELK ELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPT GDAATE Sbjct: 10 KVSELKTELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTVGDAATE 61
BLAST of mRNA_Ecto-sp13_S_contig101167.148.1 vs. uniprot
Match: UPI0006D4CA98 (heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1 n=2 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4CA98) HSP 1 Score: 53.1 bits (126), Expect = 9.550e-7 Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = 1 Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTAGDA 147 KV EL+AELASR LD KGNKA L +RLQ ALD+E G S TP G+A Sbjct: 7 KVVELRAELASRGLDTKGNKAALVERLQEALDKETGGVPSEKTPDNGNA 55
BLAST of mRNA_Ecto-sp13_S_contig101167.148.1 vs. uniprot
Match: B7G614_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G614_PHATC) HSP 1 Score: 52.0 bits (123), Expect = 1.580e-6 Identity = 28/45 (62.22%), Postives = 30/45 (66.67%), Query Frame = 1 Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPT 135 KV+EL+ EL R L V GNK DL RLQA LDEEEFG I P T Sbjct: 10 KVAELRTELERRGLPVSGNKPDLINRLQARLDEEEFGLIDAPATT 54
BLAST of mRNA_Ecto-sp13_S_contig101167.148.1 vs. uniprot
Match: A0A835Z395_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z395_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 3.290e-6 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 1 Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFG 111 KV++LKAELA R+LD G K DL QRLQAALDEEEFG Sbjct: 10 KVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFG 46
BLAST of mRNA_Ecto-sp13_S_contig101167.148.1 vs. uniprot
Match: A0A7S3PZ56_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZ56_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 1.110e-5 Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGA--ISMPTPTAGD 144 KV+EL+A LASR L G KADL+ RLQA LDEEEFG ++ P P+ G+ Sbjct: 10 KVAELRAALASRGLPSDGLKADLSNRLQARLDEEEFGMDEVTPPPPSTGE 59
BLAST of mRNA_Ecto-sp13_S_contig101167.148.1 vs. uniprot
Match: A0A7S1D3T5_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3T5_CYCTE) HSP 1 Score: 49.3 bits (116), Expect = 2.080e-5 Identity = 27/45 (60.00%), Postives = 30/45 (66.67%), Query Frame = 1 Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPT 135 KVSEL+A L R L +G KADL RLQA LDEEEFG + P T Sbjct: 33 KVSELRAALQKRGLSTEGLKADLVNRLQARLDEEEFGMVVAPQST 77
BLAST of mRNA_Ecto-sp13_S_contig101167.148.1 vs. uniprot
Match: A0A7S3HLW8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLW8_9STRA) HSP 1 Score: 49.3 bits (116), Expect = 2.120e-5 Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFG 111 KV +LK ELA R+LD G KADL QRLQ ALD+EEFG Sbjct: 16 KVQDLKDELAKRNLDTNGLKADLQQRLQTALDDEEFG 52
BLAST of mRNA_Ecto-sp13_S_contig101167.148.1 vs. uniprot
Match: A0A425D5Z6_9STRA (SAP domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D5Z6_9STRA) HSP 1 Score: 48.9 bits (115), Expect = 2.330e-5 Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 1 Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTAGDAATEV 159 KV+E+K ELA R L G K +L QRL+ ALDEEEFG + P T AA EV Sbjct: 10 KVNEIKDELAKRGLSQAGLKPELIQRLELALDEEEFGGMDGPDSTPVSAAVEV 62
BLAST of mRNA_Ecto-sp13_S_contig101167.148.1 vs. uniprot
Match: A0A8B9C943_9AVES (SAP domain-containing protein n=2 Tax=Galloanserae TaxID=1549675 RepID=A0A8B9C943_9AVES) HSP 1 Score: 45.8 bits (107), Expect = 3.640e-5 Identity = 27/44 (61.36%), Postives = 29/44 (65.91%), Query Frame = 1 Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTP 132 KVSELK EL R L KG KADL +RLQAALD+EE G P Sbjct: 12 KVSELKEELKKRRLSDKGLKADLMERLQAALDQEEAGXXXXVNP 55 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig101167.148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig101167.148.1 >prot_Ecto-sp13_S_contig101167.148.1 ID=prot_Ecto-sp13_S_contig101167.148.1|Name=mRNA_Ecto-sp13_S_contig101167.148.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTAGDAAback to top mRNA from alignment at Ecto-sp13_S_contig101167:61..219- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig101167.148.1 ID=mRNA_Ecto-sp13_S_contig101167.148.1|Name=mRNA_Ecto-sp13_S_contig101167.148.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=159bp|location=Sequence derived from alignment at Ecto-sp13_S_contig101167:61..219- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig101167:61..219- >mRNA_Ecto-sp13_S_contig101167.148.1 ID=mRNA_Ecto-sp13_S_contig101167.148.1|Name=mRNA_Ecto-sp13_S_contig101167.148.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=159bp|location=Sequence derived from alignment at Ecto-sp13_S_contig101167:61..219- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |