mRNA_Ecto-sp13_S_contig10108.139.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10108.139.1 vs. uniprot
Match: A0A6H5JQ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ31_9PHAE) HSP 1 Score: 336 bits (862), Expect = 4.540e-105 Identity = 169/196 (86.22%), Postives = 177/196 (90.31%), Query Frame = 1 Query: 1 MILLMGRSIGDWTVYQDDDDGSRRRLSPEQRRELLFTFDYYDDTVDPSADVFVTVAMTAAFESALPSTLRILGEGYVATDYDHLELAVAADDIAGLFEHSAIGDILRGAVVSPAMAVGPRYTSAVSNASPLFKLPVDMVQRGRDHGVPSYNVVRAAYGLLEATDFSDVSPDGEVAELLSSAYGGEIENLDACTGAL 588 +ILLMGRSIGDWTVYQDD+DGSRRRLS +QRRELLFTFDYYDDTVDPSADVFVTVAMTAAFESALPSTLRI+GEGYVATDYDHLEL VAADDI GLFEHS IGDILRGAV+SPAMAVG Y SAVSNASPLFKLPVDMVQR RDHGVPSYN VR AY L +AT SDVS D +V ELL +AYGGEIENLDAC GAL Sbjct: 194 LILLMGRSIGDWTVYQDDNDGSRRRLSSQQRRELLFTFDYYDDTVDPSADVFVTVAMTAAFESALPSTLRIVGEGYVATDYDHLELTVAADDITGLFEHSTIGDILRGAVLSPAMAVGAHYASAVSNASPLFKLPVDMVQRARDHGVPSYNDVREAYDLPKATAMSDVSADDDVVELLYAAYGGEIENLDACVGAL 389
BLAST of mRNA_Ecto-sp13_S_contig10108.139.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 335 bits (859), Expect = 1.590e-103 Identity = 168/196 (85.71%), Postives = 176/196 (89.80%), Query Frame = 1 Query: 1 MILLMGRSIGDWTVYQDDDDGSRRRLSPEQRRELLFTFDYYDDTVDPSADVFVTVAMTAAFESALPSTLRILGEGYVATDYDHLELAVAADDIAGLFEHSAIGDILRGAVVSPAMAVGPRYTSAVSNASPLFKLPVDMVQRGRDHGVPSYNVVRAAYGLLEATDFSDVSPDGEVAELLSSAYGGEIENLDACTGAL 588 MILLMGRSIGDWTVYQD LSPEQRRELLFTFDYY+DTVDPSADVFVTVAMTAAFESALPSTLRI+ EGYVATDYDHLEL VAA+DI GLFEHSAIGDILRGAV+SPAMAVG Y SAVSNASPLFKLPVDMVQRGRDHGVPSYN VR AYGL EATDFSDVS DG+V +LL +AYGGEI+NLDACTGAL Sbjct: 209 MILLMGRSIGDWTVYQDXXXXXXXXLSPEQRRELLFTFDYYNDTVDPSADVFVTVAMTAAFESALPSTLRIVSEGYVATDYDHLELTVAAEDITGLFEHSAIGDILRGAVLSPAMAVGAHYASAVSNASPLFKLPVDMVQRGRDHGVPSYNDVRGAYGLPEATDFSDVSSDGDVVQLLDAAYGGEIDNLDACTGAL 404
BLAST of mRNA_Ecto-sp13_S_contig10108.139.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 332 bits (850), Expect = 2.860e-102 Identity = 166/196 (84.69%), Postives = 177/196 (90.31%), Query Frame = 1 Query: 1 MILLMGRSIGDWTVYQDDDDGSRRRLSPEQRRELLFTFDYYDDTVDPSADVFVTVAMTAAFESALPSTLRILGEGYVATDYDHLELAVAADDIAGLFEHSAIGDILRGAVVSPAMAVGPRYTSAVSNASPLFKLPVDMVQRGRDHGVPSYNVVRAAYGLLEATDFSDVSPDGEVAELLSSAYGGEIENLDACTGAL 588 +ILLMGRSIGDWTVYQDDD GSRRRLSPEQRRELLFTFDYYDD ++PSADVFVTVAMTAAFESALPSTLRI+ EGYVATDYDHLEL VAA+DI GLFEHSAIGDILRGAV+SPAMAV P + SAVSNASPLFKLPVDMVQR RDHGVPSYN VR AY L +AT FSDVS D +V +LL +AYGGEIENLDAC GAL Sbjct: 209 LILLMGRSIGDWTVYQDDDGGSRRRLSPEQRRELLFTFDYYDDLLNPSADVFVTVAMTAAFESALPSTLRIVSEGYVATDYDHLELTVAAEDITGLFEHSAIGDILRGAVLSPAMAVWPHFASAVSNASPLFKLPVDMVQRARDHGVPSYNDVREAYELSKATAFSDVSADDDVVQLLYAAYGGEIENLDACVGAL 404
BLAST of mRNA_Ecto-sp13_S_contig10108.139.1 vs. uniprot
Match: D7FX03_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX03_ECTSI) HSP 1 Score: 188 bits (478), Expect = 4.810e-53 Identity = 106/220 (48.18%), Postives = 135/220 (61.36%), Query Frame = 1 Query: 1 MILLMGRSIGDWTVYQDDDDGSRRRLSPEQRRELLFTFDYYDDTVDPSADVFVTVAMTAAFESALPSTLRILGEGYVATDYDHLELAVA--ADDIAGLFEHSAIGDILRGAVVSPAMAVGPRYTSAVSNASPLFKLPVDMVQRGRDHGVPSYNVVRAAYGLLEATDFSDVSP----------------------DGEVAELLSSAYGGEIENLDACTGAL 588 +I L+G +I D D+DG + Q R L+ YD+ +P AD F A AAFESALPST+R++GEGY +T YD++ELA A AD + F + + D+LRGAV+SP A YT+AVSN SPLFKLPVD VQRGRDHG+P+YN RAA+GL EAT F+DV+ D EVA++LS+AYGG + LDA TGAL Sbjct: 368 LIRLLGGNIQDL-----DEDGREHPVPGRQSRRGLWLTTDYDENTNPGADTFTLTAGVAAFESALPSTVRVVGEGYESTRYDNIELAAAVGADGLVSFFNNVKVVDVLRGAVLSPVYAADTHYTAAVSNGSPLFKLPVDSVQRGRDHGLPTYNDARAAFGLSEATTFTDVTTXXXXXXXXXXXXXXXXXXGSDADEEVADILSTAYGGNVSTLDAVTGAL 582
BLAST of mRNA_Ecto-sp13_S_contig10108.139.1 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI) HSP 1 Score: 188 bits (478), Expect = 8.300e-52 Identity = 98/179 (54.75%), Postives = 127/179 (70.95%), Query Frame = 1 Query: 52 DDDGSRRRLSPEQRRELLFTFDYYDDTVDPSADVFVTVAMTAAFESALPSTLRILGEGYVATDYDHLELAVAADDIAGLFEHSAIGDILRGAVVSPAMAVGPRYTSAVSNASPLFKLPVDMVQRGRDHGVPSYNVVRAAYGLLEATDFSDVSPDGEVAELLSSAYGGEIENLDACTGAL 588 D +G+ RR + R L + + Y+ T++ +AD F A AAFESALP T+RI+ +GYV+TD D++EL VA+ D+AG+F + + D+LRGAV+SPA+ V Y+ VSN SPLFKLPVD VQRGRDHG+PSYN R A+GL AT F DVS D ++A LS AYGG+I LDA TGAL Sbjct: 195 DSEGAHRRS--RRGRRLYVSSNDYNTTINAAADAFTVTAGGAAFESALPGTVRIVSDGYVSTDDDNVELNVASADMAGIFARNNVADVLRGAVLSPALTVDAYYSPVVSNLSPLFKLPVDGVQRGRDHGLPSYNGAREAFGLDPATTFEDVSDDADLASRLSDAYGGDINGLDAFTGAL 371
BLAST of mRNA_Ecto-sp13_S_contig10108.139.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 186 bits (473), Expect = 4.050e-51 Identity = 100/204 (49.02%), Postives = 129/204 (63.24%), Query Frame = 1 Query: 43 YQDDDDGSRRRLSPEQRRELLFTFDYYDDTVDPSADVFVTVAMTAAFESALPSTLRILGEGYVATDYDHLELAVA--ADDIAGLFEHSAIGDILRGAVVSPAMAVGPRYTSAVSNASPLFKLPVDMVQRGRDHGVPSYNVVRAAYGLLEATDFSDVSP--------------------DGEVAELLSSAYGGEIENLDACTGAL 588 ++ D+D + Q R L+ YD+ ++P AD F A AAFESALPST+R++GEGY +T YD++ELA A AD + F + + D+LRGAV+SP A YT+AVSN SPLFKLPVD VQRGRDHG+P+YN RAA+GL EAT F+DV+ D EVA++LS+AYGG + LDA TGAL Sbjct: 408 HKSDEDEREHPVPGRQSRRGLWLTTDYDENINPGADTFTLTAGAAAFESALPSTVRVVGEGYESTRYDNIELAAAVGADSLVSFFNNVKVVDVLRGAVLSPVYAADTHYTAAVSNGSPLFKLPVDSVQRGRDHGLPTYNDARAAFGLSEATTFTDVTTSXXXXXXXXXXXXXXXGSDADEEVADILSTAYGGNVSTLDAVTGAL 611
BLAST of mRNA_Ecto-sp13_S_contig10108.139.1 vs. uniprot
Match: A0A6H5JBZ5_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ5_9PHAE) HSP 1 Score: 132 bits (331), Expect = 1.990e-33 Identity = 65/104 (62.50%), Postives = 78/104 (75.00%), Query Frame = 1 Query: 277 IAGLFEHSAIGDILRGAVVSPAMAVGPRYTSAVSNASPLFKLPVDMVQRGRDHGVPSYNVVRAAYGLLEATDFSDVSPDGEVAELLSSAYGGEIENLDACTGAL 588 +AG+F + + D+LRGAV+SPA+ V Y+ VSN SPLFKLPVD VQRGRDHG+PSYN R AYGL AT F DVS D ++A LS AYGG+I+ LDA TGAL Sbjct: 1 MAGIFARNDVADVLRGAVLSPALTVDAYYSPVVSNLSPLFKLPVDGVQRGRDHGLPSYNAAREAYGLDPATTFEDVSDDADLASRLSDAYGGDIDGLDAFTGAL 104
BLAST of mRNA_Ecto-sp13_S_contig10108.139.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 131 bits (329), Expect = 8.650e-32 Identity = 73/141 (51.77%), Postives = 90/141 (63.83%), Query Frame = 1 Query: 220 EGYVATDYDHLELAVA--ADDIAGLFEHSAIGDILRGAVVSPAMAVGPRYTSAVSNASPLFKLPVDMVQRGRDHGVPSYNVVRAAYGLLEATDFSDVSP----------------DGEVAELLSSAYGGEIENLDACTGAL 588 EGY +T YD+ ELA A AD + F+ + D+LRGAV+SP +A +T+AVSN SPLFKLPVD VQRGRDH +P+YN R A+GL AT FSDV+ D VA +LS+AYGG+I LDA TGAL Sbjct: 356 EGYESTRYDNTELAAAVGADSLVSFFDSVEVADVLRGAVLSPVLAANSYFTTAVSNGSPLFKLPVDAVQRGRDHALPTYNDARQAFGLDVATTFSDVTTSXXXXXXXXXXXXXDSDELVATILSAAYGGDISTLDAVTGAL 496
BLAST of mRNA_Ecto-sp13_S_contig10108.139.1 vs. uniprot
Match: D8LB73_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB73_ECTSI) HSP 1 Score: 124 bits (310), Expect = 2.690e-29 Identity = 68/157 (43.31%), Postives = 90/157 (57.32%), Query Frame = 1 Query: 121 YDDTVDPSADVFVTVAMTAAFESALPSTLRILGEGYVATDYDHLELAVAADDIAGLFEH-SAIGDILRGAVVSPAMAVGPRYTSAVSNASPLFKLPVDMVQRGRDHGVPSYNVVRAAYGLLEATDFSDVSPDGEVAELLSSAYGGEIENLDACTGAL 588 YD D DVF A SALPST+ +L +G+ +ELA A D+AGL I I+RGA + A + + + VS +SPLF PV+ +QRGRDHGVPSYN R AY L F++++ D V LS+AYG +++ LDA TGAL Sbjct: 318 YDAGTDAGTDVFFATVAAPALYSALPSTVGLLDDGFEVMAEHEVELATANADLAGLVTRIGGIEPIIRGASYARARGIDASFVAEVSVSSPLFNFPVEAIQRGRDHGVPSYNSAREAYALSRFDSFAEITSDTTVQATLSTAYGNDVDLLDAYTGAL 474
BLAST of mRNA_Ecto-sp13_S_contig10108.139.1 vs. uniprot
Match: A0A6H5K036_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K036_9PHAE) HSP 1 Score: 105 bits (261), Expect = 7.770e-23 Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 145 ADVFVTVAMTAAFESALPSTLRILGEGYVATDYDHLELAVAADDIA--GLFEHSAIGDILRGAVVSPAMAVGPRYTSAVSNASPLFKLPVDMVQRGRDHGVPSYNVVR 462 AD F A AFESALP T+R++ EGY +T L L + + + LF+ + D+LRGAV+SP +A +T+AVSN SPLFKLPVD VQRGRDHG+P+YN R Sbjct: 408 ADTFTLTAGAVAFESALPPTVRVVAEGYESTRIPCLVLELHRSNASTNSLFQ---VADVLRGAVLSPVLAADSHFTTAVSNGSPLFKLPVDAVQRGRDHGLPTYNDAR 512 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10108.139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10108.139.1 >prot_Ecto-sp13_S_contig10108.139.1 ID=prot_Ecto-sp13_S_contig10108.139.1|Name=mRNA_Ecto-sp13_S_contig10108.139.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp MILLMGRSIGDWTVYQDDDDGSRRRLSPEQRRELLFTFDYYDDTVDPSADback to top mRNA from alignment at Ecto-sp13_S_contig10108:3057..3969+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10108.139.1 ID=mRNA_Ecto-sp13_S_contig10108.139.1|Name=mRNA_Ecto-sp13_S_contig10108.139.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=913bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10108:3057..3969+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10108:3057..3969+ >mRNA_Ecto-sp13_S_contig10108.139.1 ID=mRNA_Ecto-sp13_S_contig10108.139.1|Name=mRNA_Ecto-sp13_S_contig10108.139.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=588bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10108:3057..3969+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |