mRNA_Ecto-sp13_S_contig10108.138.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10108.138.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 267 bits (683), Expect = 3.330e-79 Identity = 130/142 (91.55%), Postives = 135/142 (95.07%), Query Frame = 1 Query: 190 LEQLRPTARELMTDVFLSSPPSISDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPISFFRSEATVTDSVRNPINYASSFIDLDFVYGRSKDAADTLRTFQDGMLSMADDNMPIKNDDGTWLV 615 L L+ RELMTDVFLSSPPS+SDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPI FFRSEATVTDSVRNPINYASSFIDLDFVYGRS+DAAD LRTF+DGMLSMADDNMPIKNDDGTWL+ Sbjct: 6 LGALQGQPRELMTDVFLSSPPSVSDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPIPFFRSEATVTDSVRNPINYASSFIDLDFVYGRSEDAADALRTFEDGMLSMADDNMPIKNDDGTWLI 147
BLAST of mRNA_Ecto-sp13_S_contig10108.138.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 261 bits (666), Expect = 6.600e-77 Identity = 127/142 (89.44%), Postives = 132/142 (92.96%), Query Frame = 1 Query: 190 LEQLRPTARELMTDVFLSSPPSISDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPISFFRSEATVTDSVRNPINYASSFIDLDFVYGRSKDAADTLRTFQDGMLSMADDNMPIKNDDGTWLV 615 L LR RELMTDVFLSSPPS+SDMNAV+IAWGQLLLLDLSYTVDNSSEPF+IACDDGGGSVDVWCPLGEASDPI FFRS+ATVTDSVRNPINYASSFIDLDFVYGRSKDAAD LRTF GMLSMADDNMPIKN DGTWL+ Sbjct: 6 LGALRGQPRELMTDVFLSSPPSVSDMNAVSIAWGQLLLLDLSYTVDNSSEPFEIACDDGGGSVDVWCPLGEASDPIPFFRSQATVTDSVRNPINYASSFIDLDFVYGRSKDAADALRTFDGGMLSMADDNMPIKNSDGTWLI 147
BLAST of mRNA_Ecto-sp13_S_contig10108.138.1 vs. uniprot
Match: A0A6H5JQ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ31_9PHAE) HSP 1 Score: 251 bits (642), Expect = 6.750e-74 Identity = 119/132 (90.15%), Postives = 127/132 (96.21%), Query Frame = 1 Query: 220 LMTDVFLSSPPSISDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPISFFRSEATVTDSVRNPINYASSFIDLDFVYGRSKDAADTLRTFQDGMLSMADDNMPIKNDDGTWLV 615 +MTDVFLSSPP +S+MN V IAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPISFFRSEATVTDSVRNPINYASSFIDLDF+YGRS+DAAD LRTF+ GMLSMADDNMPIKN+DGTWL+ Sbjct: 1 MMTDVFLSSPPKVSEMNTVFIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPISFFRSEATVTDSVRNPINYASSFIDLDFLYGRSEDAADALRTFEGGMLSMADDNMPIKNNDGTWLI 132
BLAST of mRNA_Ecto-sp13_S_contig10108.138.1 vs. uniprot
Match: D7FX03_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX03_ECTSI) HSP 1 Score: 226 bits (575), Expect = 5.400e-67 Identity = 114/195 (58.46%), Postives = 142/195 (72.82%), Query Frame = 1 Query: 67 FTARSYDGTGNNEDNPSWGAGGTSQIRAKAGDLYADAAFTPLEQL-RPTARELMTDVFLSSPPSISDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDG--GGSVDVWCPLGEASDPISFFRSEATVTDS-------VRNPINYASSFIDLDFVYGRSKDAADTLRTFQDG--MLSMADDNMPIKNDDGTWLV 615 FT RS+DG GNNE PSWGA G +Q+R+ AG YADA FTP L RPTARE+MTDVFL SPP++S M+A+ I WGQLL DLS T DNSSEP DI C+DG G VDVWCPLG SDPI F+RS+A ++D R+P+NYA++F+DLDFVYGRS+D A LR+ DG +++ ++ +P NDDGTWL+ Sbjct: 112 FTPRSFDGVGNNEAFPSWGAVGATQLRSVAGAYYADADFTPPGDLTRPTAREVMTDVFLESPPALSTMSALFIGWGQLLAFDLSLTSDNSSEPLDIECNDGTGAGGVDVWCPLGAESDPIPFYRSDAALSDDDGALGEETRSPVNYATAFVDLDFVYGRSEDEAAALRSSADGDGFMALTENGLPYVNDDGTWLI 306
BLAST of mRNA_Ecto-sp13_S_contig10108.138.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 228 bits (581), Expect = 1.860e-65 Identity = 119/215 (55.35%), Postives = 157/215 (73.02%), Query Frame = 1 Query: 28 FFLAG-----AAAVDEVI---FTARSYDGTGNNEDNPSWGAGGTSQIRAKAGDLYADAAFTPLEQL-RPTARELMTDVFLSSPPSISDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGS--VDVWCPLGEASDPISFFRSEATVTDS-------VRNPINYASSFIDLDFVYGRSKDAADTLRTFQ-DGMLSMADDNMPIKNDDGTWLV 615 FFLAG + D++ FT RSYDG GNNE NP+WGA G+ ++R+ A YAD FTP L RPTARE+MTDVFL+SPP++S +A+ +AWGQLL DLS TVDNSSEPFDIAC+DG G+ +D+WCPLG +SDPISFFRS+A ++D R+P+NYA++F+DLDFVYGRS++ A TLR+ +G +++ + +P NDDGTWL+ Sbjct: 15 FFLAGLLVWTTVSADDLPTDEFTPRSYDGVGNNEANPTWGAVGSIELRSVAQADYADELFTPPGDLTRPTAREVMTDVFLASPPAVSTESALFVAWGQLLTYDLSLTVDNSSEPFDIACNDGNGAEGIDIWCPLGASSDPISFFRSDAGLSDDDGANSVETRSPVNYATAFMDLDFVYGRSEEDAATLRSSDGNGFMAVTEKGLPYLNDDGTWLI 229
BLAST of mRNA_Ecto-sp13_S_contig10108.138.1 vs. uniprot
Match: D8LB73_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB73_ECTSI) HSP 1 Score: 175 bits (443), Expect = 2.460e-47 Identity = 89/183 (48.63%), Postives = 120/183 (65.57%), Query Frame = 1 Query: 76 RSYDGTGNNEDNPSWGAGGTSQIRAKAGDLYADAAFTPLEQLRPTARELMTDVFLSSPPSISDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPISFFRSEATVT---DSVRNPINYASSFIDLDFVYGRSKDAADTLRTFQDGMLSMADDNMPIKNDDGTWLV 615 R+Y+GTGNN D P WG+ G Q+R+ Y D P RPTARE++++VFL++P + S NA+ + WG L+ DL T DN+SEP DIAC+D DVWCPLG SDPI F RSEA + R+PINYA++F+DLD++YGR + + +LRT G ++M +D +P DDGTWLV Sbjct: 45 RTYNGTGNNLDQPEWGSVGQRQLRSMTEASYGDGVSEPPGDDRPTAREVLSEVFLANPSTTSTANALFVGWGLLVGYDLFLTQDNASEPLDIACNDAE-IRDVWCPLGSLSDPIPFSRSEAGEDAGGEEARSPINYATAFVDLDWMYGRDEATSASLRTEDGGYMNMTNDELPHLLDDGTWLV 226
BLAST of mRNA_Ecto-sp13_S_contig10108.138.1 vs. uniprot
Match: A0A6H5JA13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA13_9PHAE) HSP 1 Score: 159 bits (403), Expect = 5.400e-46 Identity = 76/141 (53.90%), Postives = 104/141 (73.76%), Query Frame = 1 Query: 202 RPTARELMTDVFLSSPPSISDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDG--GGSVDVWCPLGEASDPISFFRSEATV-TDSVRNPINYASSFIDLDFVYGRSKDAADTLRTFQDGMLSMADDNMPIKNDDGTWLV 615 +P +E+MTD+FL+S ++S +++ IAWGQLL DL+ TV N +E D+ C+D G +DVWCPLG AS+ I F RS+A TD VR+PINYASS+IDLDFVYGRS +AA+ LRT + G +++ D +P +N+DGTWLV Sbjct: 13 QPLGKEVMTDIFLTSTAALSAKSSLFIAWGQLLTYDLALTVANETESLDVPCNDADQNGGIDVWCPLGAASEDIPFSRSDAAEGTDGVRSPINYASSYIDLDFVYGRSAEAAELLRTMEGGFMNVTDSGVPFQNEDGTWLV 153
BLAST of mRNA_Ecto-sp13_S_contig10108.138.1 vs. uniprot
Match: A0A6H5K9L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L2_9PHAE) HSP 1 Score: 166 bits (420), Expect = 1.090e-44 Identity = 86/176 (48.86%), Postives = 115/176 (65.34%), Query Frame = 1 Query: 97 NNEDNPSWGAGGTSQIRAKAGDLYADAAFTPLEQLRPTARELMTDVFLSSPPSISDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPISFFRSEATVT---DSVRNPINYASSFIDLDFVYGRSKDAADTLRTFQDGMLSMADDNMPIKNDDGTWLV 615 NN D P WG+ G Q+R+ YAD P RPTARE++++VFL++P + S NA+ + WG L+ DL T+DN+SEP DIAC+D DVWCPLG SDPI F RSEA + R+PINYA++F+DLD++YGR + + +LRT G ++M DD +P DDGTWLV Sbjct: 22 NNLDQPEWGSVGQRQLRSITEASYADGDSEPPGDDRPTAREVLSEVFLANPSTSSTANALFVGWGLLVGYDLFLTLDNASEPLDIACNDAE-IRDVWCPLGSLSDPIPFSRSEAGEDAGGEEARSPINYATAFVDLDWLYGRDEATSASLRTEDGGYMNMTDDELPHLLDDGTWLV 196
BLAST of mRNA_Ecto-sp13_S_contig10108.138.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 164 bits (414), Expect = 5.080e-43 Identity = 80/142 (56.34%), Postives = 102/142 (71.83%), Query Frame = 1 Query: 223 MTDVFLSSPPSISDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDG--GGSVDVWCPLGEASDPISFFRSEATVTDS-------VRNPINYASSFIDLDFVYGRSKDAADTLRTFQDG--MLSMADDNMPIKNDDGTWLV 615 MTDVFL SPP++S M+A+ I WGQLL DLS T DNSSEP DI C+DG G VDVWCPLG SDPI F+RS+A ++D R+P+NYA++F+DLDFVYGRS+D A LR+ DG +++ + +P NDDGTWL+ Sbjct: 1 MTDVFLESPPALSTMSALFIGWGQLLAFDLSLTSDNSSEPLDIDCNDGTGAGGVDVWCPLGAESDPIPFYRSDAALSDDDGALSEETRSPVNYATAFVDLDFVYGRSEDDAAALRSSADGDGFMALTESGLPYVNDDGTWLI 142
BLAST of mRNA_Ecto-sp13_S_contig10108.138.1 vs. uniprot
Match: A0A6H5K036_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K036_9PHAE) HSP 1 Score: 154 bits (388), Expect = 1.780e-40 Identity = 84/153 (54.90%), Postives = 109/153 (71.24%), Query Frame = 1 Query: 166 YADAAFTPLEQL-RPTARELMTDVFLSSPPSISDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDG----GGS----VDVWCPLGEASDPISFFRSEATVTDS-------VRNPINYASSFIDLDFVYGRSKDAADTLRTFQ-DGMLSMAD 573 YAD FTP L RPTARE+MTDVFL+SPP++S +A+ +AW QLL DLS VD SSEPFDIACDDG G + D+WCPLG ++DPISFFRS+A ++D R+P+NYA++FI LDFVYGRS++ A TLR+ +G +++ D Sbjct: 119 YADELFTPPGDLTRPTAREVMTDVFLASPPAVSTESALFVAWAQLLTYDLSLAVDISSEPFDIACDDGERVEGATGRRETDIWCPLGGSTDPISFFRSDAGLSDDDGTNSAETRSPVNYATAFIGLDFVYGRSEEDAATLRSSDGNGFITIPD 271 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10108.138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10108.138.1 >prot_Ecto-sp13_S_contig10108.138.1 ID=prot_Ecto-sp13_S_contig10108.138.1|Name=mRNA_Ecto-sp13_S_contig10108.138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=206bp MRLQYGAVFFLAGAAAVDEVIFTARSYDGTGNNEDNPSWGAGGTSQIRAKback to top mRNA from alignment at Ecto-sp13_S_contig10108:460..1531+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10108.138.1 ID=mRNA_Ecto-sp13_S_contig10108.138.1|Name=mRNA_Ecto-sp13_S_contig10108.138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1072bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10108:460..1531+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10108:460..1531+ >mRNA_Ecto-sp13_S_contig10108.138.1 ID=mRNA_Ecto-sp13_S_contig10108.138.1|Name=mRNA_Ecto-sp13_S_contig10108.138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=618bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10108:460..1531+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |