mRNA_Ecto-sp13_S_contig10102.135.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10102.135.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI) HSP 1 Score: 734 bits (1895), Expect = 2.430e-250 Identity = 447/533 (83.86%), Postives = 455/533 (85.37%), Query Frame = 1 Query: 1 VGGRGAVSNTMTNTRESVRMLQKRGSGLLRSERTTRRFDCSASGGWSSWRHPIKGGDALKSVGEESDGGESGASGRFLGAWGRRKSASIGVPVRGAATTSAAVALGPSSSVNDRKGAENKPNSVDTMGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGPAGXXXXXXXXXXXXXXXXXXXXXXXAARIGETLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWVISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNASSSVSSATVATLAAYDSGISGSVRPRAGASDSACGTTCTTATARRGKGPSRTXXXXXXXXERARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPMHDNYKIYAAVMISIYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKHVV 1599 VGGRGAVSNTMTNTRESVRMLQKRGSGLLRSE TTRRFD SASGGWSSW+HP KGGD LKSVGEESDGGESG SGRF+GAWGRR SASIGVP+RGAA T AA A GPSSSVND KGA NK +S TMGA F+PLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S GR LQPSAAPAVRGP G AARIGE LARLPLSKLKIVVVVWQISNAFAE+TKVPFPPVYEKFLSIIGIFSFDLGW+ISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNN S+SVSSAT ATLAAYDSGISGSVRPRAGASDSA GT TTA XXXXXXXX QGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTP HDNYK YAA MI IYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKHVV Sbjct: 726 VGGRGAVSNTMTNTRESVRMLQKRGSGLLRSEGTTRRFDFSASGGWSSWQHPTKGGDPLKSVGEESDGGESGGSGRFMGAWGRRMSASIGVPMRGAAITCAAAATGPSSSVNDSKGAGNKLDSAGTMGADFLPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---GRGLQPSAAPAVRGPRGDGKGARGGQQQGMGGGDRKKKTAAARIGEMLARLPLSKLKIVVVVWQISNAFAEVTKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNTSTSVSSATAATLAAYDSGISGSVRPRAGASDSARGTASTTAXXXXXXXXXXXXXXXXXXXXXXXQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKTYAAAMICIYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKHVV 1255
BLAST of mRNA_Ecto-sp13_S_contig10102.135.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE) HSP 1 Score: 592 bits (1525), Expect = 7.830e-190 Identity = 411/540 (76.11%), Postives = 425/540 (78.70%), Query Frame = 1 Query: 1 VGGRGAVSNTMTNTRESVRMLQKRGSGLLRSERTTRRFDCSASGGWSSWRHPIKGGDALKSVGEESDGGESGASGRFLGAWGRRKSASIGVPVRGAATTSAAVALGPSSSVNDRKGAENKPNSVDTMGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGPAGXXXXXXXXXXXXXXXXXXXXXXXAARIGETLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWVISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNASSSVSSATVATLAAYDSGISGSVRPRAGASDS-------ACGTTCTTATARRGKGPSRTXXXXXXXXERARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPMHDNYKIYAAVMISIYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKHVV 1599 VGGRGAVS TMTNTRESVRMLQ+RGSGLLRSE T RRF+ SASG SS HP K G ALKSVGEESDGGESG SGRFLGAWGRRKS IG P SVND KGA +K +S T+ AGF PLARSRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX AARIGE LARLPLSKLKIV+VVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGW+ISAACLTAG+DFYDKLLIVTIGPVGLLLLLGFTFYLGARPVR GR++DMS R+ AS SVSSATVATL AYDSG S SVRP+ A GT XXXXXXXX RARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVY+QVSTVVFQAFACEDFPEIGKSFLRADFRIECDTP HDNYKIYAAVMI IYPLGIPAAF YFL RQ SRINPPTDKGLK+QRGRKHVV Sbjct: 1187 VGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTNRRFNFSASGDGSSGEHPSKSGGALKSVGEESDGGESGGSGRFLGAWGRRKSTRIGAPXXXXXXXXXXXXXXXXXSVNDSKGAGSKSDSAGTVVAGFAPLARSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARIGEMLARLPLSKLKIVIVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRIVDMSSRSTASDSVSSATVATLEAYDSGSSRSVRPQXXXXXXXXXXXXXARGTXXXXXXXXXXXXXXXXXXXXXXXXXRARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVV 1721
BLAST of mRNA_Ecto-sp13_S_contig10102.135.1 vs. uniprot
Match: A0A6H5JI42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI42_9PHAE) HSP 1 Score: 525 bits (1352), Expect = 2.750e-176 Identity = 376/521 (72.17%), Postives = 383/521 (73.51%), Query Frame = 1 Query: 31 MTNTRESVRMLQKRGSGLLRSERTTRRFDCSASGGWSSWRHPIKGGDALKSVGEESDGGESGASGRFLGAWGRRKSASIGVPVRGAATTSAAVALGPSSSVNDRKGAENKPNSVDTMGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGPAGXXXXXXXXXXXXXXXXXXXXXXXAARIGETLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWVISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNASSSVSSATVATLAAYDSGISGSVRPRAGASDSACGTTCTTATARRGKGPSRTXXXXXXXXERARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPMHDNYKIYAAVMISIYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKH 1593 MTNTRESVRMLQKRGSGLLRS+ TTRR D ASGGWSSWRHPI+GGDALK++GEESDGGESG SGRFLGAWGRRKSASIGVP+RGAAT XXXXXXXXXXXXXXXXXXXXXXXXXXXXX R LQPSAAPAVRGP XXXXXXXXXXXXXXXXXXXXX A RIGE LARLPLSK AFAEITKVPFPPVYEKFLSIIG FSF LGWVISAACLTAG DFYDKLL VSSAT ATLAAYDSGISGSVR RAGASD A GTT TTAT RRGKGPSRT XXXXXXXERARQGRARPSARRVWR+GPGDESDIEQNHLWELFARHTTMMLIILYLVY+QVSTVVFQAFACEDFPEIGKSFLRADFRIECD P H YKIYAAVMI IYPLGIP AFCYFL RQMSRINPPTDKGLKNQRGRKH Sbjct: 1 MTNTRESVRMLQKRGSGLLRSDSTTRRLDFGASGGWSSWRHPIEGGDALKNLGEESDGGESGGSGRFLGAWGRRKSASIGVPMRGAATX--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLQPSAAPAVRGPXXXXXXXXXXXXXXXXXXXXXXXTAAVRIGEMLARLPLSKDCR-------RCAFAEITKVPFPPVYEKFLSIIGTFSFGLGWVISAACLTAGNDFYDKLL-----------------------------------------VSSATAATLAAYDSGISGSVRTRAGASDPARGTTSTTATTRRGKGPSRTAXXXXXXXERARQGRARPSARRVWRSGPGDESDIEQNHLWELFARHTTMMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDKPKHYTYKIYAAVMICIYPLGIPGAFCYFLARQMSRINPPTDKGLKNQRGRKH 453
BLAST of mRNA_Ecto-sp13_S_contig10102.135.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 541 bits (1393), Expect = 4.360e-172 Identity = 381/533 (71.48%), Postives = 390/533 (73.17%), Query Frame = 1 Query: 1 VGGRGAVSNTMTNTRESVRMLQKRGSGLLRSERTTRRFDCSASGGWSSWRHPIKGGDALKSVGEESDGGESGASGRFLGAWGRRKSASIGVPVRGAATTSAAVALGPSSSVNDRKGAENKPNSVDTMGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGPAGXXXXXXXXXXXXXXXXXXXXXXXAARIGETLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWVISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNASSSVSSATVATLAAYDSGISGSVRPRAGASDSACGTTCTTATARRGKGPSRTXXXXXXXXERARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPMHDNYKIYAAVMISIYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKHVV 1599 VGGRGAVS TMTNTRESVRMLQ+RGSGLLRSE TTRRF SASGG SS HP KG ALKSVGEESDGGESG SGRFLGAWGRRKSASIG P GA TTS+A GPSSSVND KGA +K +S T+GAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R LQPSAAPAVRGP XXXXXXXXXXXXXXXXXXXXXXXAARIGE LARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGW+ISAACLTAGIDFYDKLL RGKG SRT ERARQGRARPSARRVWRNGPGDESD+EQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTP HDNYKIYAAVMI I +F YFLTRQ SRINPPTDKGLK+QRGRKHVV Sbjct: 1076 VGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFHFSASGGGSSGGHPTKGSSALKSVGEESDGGESGGSGRFLGAWGRRKSASIGAPPPGAITTSSAAGSGPSSSVND-KGAGSKADSAGTVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RGLQPSAAPAVRGPXXXXXXXXXXXXXXXXXXXXXXXXXAARIGEMLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLL----------------------------------------------------------------------------------RGKGASRTAMAAAAAAERARQGRARPSARRVWRNGPGDESDLEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICI-------SFWYFLTRQRSRINPPTDKGLKDQRGRKHVV 1515
BLAST of mRNA_Ecto-sp13_S_contig10102.135.1 vs. uniprot
Match: D7G5M2_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M2_ECTSI) HSP 1 Score: 424 bits (1090), Expect = 5.400e-136 Identity = 291/425 (68.47%), Postives = 304/425 (71.53%), Query Frame = 1 Query: 1 VGGRGAVSNTMTNTRESVRMLQKRGSGLLRSERTTRRFDCSASGGWSSWRHPIKGGDALKSVGEESDGGESGASGRFLGAWGRRKSASIGVPVRGAATTSAAVALGPSSSVNDRKGAENKPNSVDTMGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGPAGXXXXXXXXXXXXXXXXXXXXXXXAARIGETLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWVISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNASSSVSSATVATLAAYDSGISGSVRPRA-GASDSACGTTCTTATARRGKGPSRTXXXXXXXXERARQGRARPSARRVWRNGPGDESDIEQN 1272 VGGRGAVSNT+TNTRE R LQ+RGSGLLR E TTRRFD ASGG S HP KG ALKSVGEESDGGESG +GRF+G WGRRKSASIG P GA TSAA A GP SSV D KG +KP+S +GAGFVP ARS AA AD SN TVGSSSSG LQ AAPAVRGP XXXXXXXXXXXXXXXXAAR+GE LARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGW++SAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVR GRVID R+NASSS GSV P A ASDSA GT XXXXXXXX RARQGRARPSARRVWRNGPGDESD+EQ+ Sbjct: 460 VGGRGAVSNTLTNTREWARTLQRRGSGLLRWEGTTRRFDFRASGGGSEG-HPTKGSGALKSVGEESDGGESGGTGRFMGVWGRRKSASIGAPPPGATATSAAAATGPLSSVTDIKGGGSKPDSAGAVGAGFVPPARSPAAAAAWDAAAGSALVHPTMRRADKEGE----ADASNNTVGSSSSGSGLQSCAAPAVRGPGSGGKGACGXXXXXXXXXXXXXXXXAARVGEMLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMMSAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRVIDTRARSNASSS-----------------GSVSPHAPAASDSARGTXXXXXXXXXXXXXXXXXXXXXXXXXRARQGRARPSARRVWRNGPGDESDLEQS 862
BLAST of mRNA_Ecto-sp13_S_contig10102.135.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 307 bits (786), Expect = 4.080e-88 Identity = 178/311 (57.23%), Postives = 207/311 (66.56%), Query Frame = 1 Query: 673 RIGETLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWVISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNASSSVSSATVATLAAYDSGISGSV--RPRAGASDSACGTTCTTATARRGKGPSRTXXXXXXXXERARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPMHDNYKIYAAVMISIYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKHVV 1599 R+ LA LPLSKLKIV+VVWQI++AFA+ITK PFPP+YEKFLSIIGIFSFDLGW++SAACLT GIDFYDKLLIVTIGP+ L LG TF++G+RP + + + NA+++ D G SGS G AC + T+ TA G AR+ PS R R GD + EQ LW LFARHTTMMLI+LYLVYTQ+STVVFQ FACE PEIGK +LRADF IECDT H YK YA VM+ IYPLGIPA F YFL RQ SRINPPTD+ LK +RG +HVV Sbjct: 1251 RVANLLAALPLSKLKIVIVVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRPAK-----ETNMSPNATTA------------DGGASGSGGRELEEGRVQGACSGSTTSVTANSGAA--------------ARE----PSVRSALRAKSGDRKNPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTDEALKKRRGGRHVV 1526
BLAST of mRNA_Ecto-sp13_S_contig10102.135.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI) HSP 1 Score: 274 bits (700), Expect = 1.020e-76 Identity = 165/309 (53.40%), Postives = 194/309 (62.78%), Query Frame = 1 Query: 673 RIGETLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWVISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNASSSVSSATVATLAAYDSGISGSVRPRAGASDSACGTTCTTATARRGKGPSRTXXXXXXXXERARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPMHDNYKIYAAVMISIYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKHVV 1599 R+ L LPLSKLKIV+ +ITK PFPP+YEKFLSIIGIFSFDLGW++SAACLT GIDFYDKLL+VTIGP+ L LG TF++G+RP + +MS A +S + + + G R+ AS A G ATAR S R + R G + + EQ LW LFARHTT+MLI+LYLVYTQ+STVVFQ F+CED PEIGKS+LRADFRIECDT H YK YA VMI IYPLGIPA F YFL RQ SRINPPTD+ LK +RG +HV Sbjct: 1028 RVANLLTALPLSKLKIVI----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLMVTIGPLLPLCFLGITFFVGSRPAKK---TNMSPNTTAGGGATSGS--RVGEVEEGRVQGASSRSMASVMAIGG----ATARA------------------------QSVRNLLRAKSGQQKNPEQERLWGLFARHTTIMLIVLYLVYTQISTVVFQTFSCEDLPEIGKSYLRADFRIECDTQRHTLYKAYAGVMICIYPLGIPAIFFYFLVRQRSRINPPTDEALKKRRGGRHVA 1293
BLAST of mRNA_Ecto-sp13_S_contig10102.135.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI) HSP 1 Score: 157 bits (398), Expect = 3.540e-37 Identity = 105/227 (46.26%), Postives = 127/227 (55.95%), Query Frame = 1 Query: 673 RIGETLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWVISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNASSSVSSATVATLAAYDSGISGSVRPRAGASDSACGTTCTTATARRGKGPSRTXXXXXXXXERARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTV 1353 R+ LA LPLSKLKIV+ +ITK PFPP+YEKFLSIIGIFSFDLGW++SAACLT GIDFYDKLLIVTIGP+ L LG TF++G+RP + + + NA++ + G R + +S S T A RG PS R R GD + EQ LW LFARHTT+MLI+LYLVYTQ+STV Sbjct: 1068 RVANLLAALPLSKLKIVI----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLFFLGITFFVGSRPAK-----ETNMSPNATAGGXXXXXXXXRELEEG-----RVQGASSGSTTSVTSNRGAAARG-----------------------PSVRSALRAKSGDPKNPEQQRLWGLFARHTTIMLIVLYLVYTQISTV 1251
BLAST of mRNA_Ecto-sp13_S_contig10102.135.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI) HSP 1 Score: 139 bits (349), Expect = 6.480e-31 Identity = 91/298 (30.54%), Postives = 131/298 (43.96%), Query Frame = 1 Query: 673 RIGETLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWVISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNASSSVSSATVATLAAYDSGISGSVRPRAGASDSACGTTCTTATARRGKGPSRTXXXXXXXXERARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPMHDNYKIYAAVMISIYPLGIPAAFCYFLTRQMSRINPPTDKG 1566 +I ARLP+ KLKI+VVVWQI + F IT V FPP Y +FLS I + SFDLG V+SA+C+ +DFY LL+ T+GP+G+ ++L T+++ R R G G + + W +RH L++ +LV+ ST+ F+ FAC+D GKS+LRAD+ I+C T H+ YK+YA VMI +YP+GIP + + L + +NP G Sbjct: 1098 KIKRWAARLPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKR--------------------------------------------------------------------------------------------RAGAGSAGSLMRRAAW---SRHMAAGLLLSFLVFIATSTMAFKTFACDDEAVEGKSYLRADYSIQCHTDKHEWYKVYAGVMIMVYPVGIPLLYAFILWQNRESLNPRVKTG 1300
BLAST of mRNA_Ecto-sp13_S_contig10102.135.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.060e-27 Identity = 99/295 (33.56%), Postives = 143/295 (48.47%), Query Frame = 1 Query: 670 ARIGETLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWVISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTF-YLGARPVRTGRVIDMSFRNNASSSVSSATVATLAAYDSGISGSVRPRAGASDSACGTTCTTATARRGKGPSRTXXXXXXXXERARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPMHDNYKIYAAVMISIYPLGIPAAFCYFLTRQMSRINP 1551 +R+ + LP+ KLKI +VV+QI +A+IT V FPP Y K L + + + D+GWV+SA+C+ + +FY +L++ T+ P+ L L TF Y +R VR G + N SS S TV + P T T T RNG G E + + RH +++ +LVY+ VST+VFQAFAC+ E GK+FLRAD+ +EC TP H Y+ YA +MI +YP+GIP + + L + RI P Sbjct: 1499 SRMVSKVKELPVHKLKIPIVVFQILTQYADITTVDFPPAYTKLLGFMDVLNLDMGWVLSASCIFSP-NFYGRLVLTTLVPIVFGLALCCTFMYAKSRSVRVG----LPKANEGSSIRSINTVVSXXXXXXXXXXXXAPA----------TVFTGT----------------------------------RNGHGMIMS-EARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQAFACDTLDEQGKTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFQHRHRIYP 1743 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10102.135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10102.135.1 >prot_Ecto-sp13_S_contig10102.135.1 ID=prot_Ecto-sp13_S_contig10102.135.1|Name=mRNA_Ecto-sp13_S_contig10102.135.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=523bp MTNTRESVRMLQKRGSGLLRSERTTRRFDCSASGGWSSWRHPIKGGDALKback to top mRNA from alignment at Ecto-sp13_S_contig10102:212..4610- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10102.135.1 ID=mRNA_Ecto-sp13_S_contig10102.135.1|Name=mRNA_Ecto-sp13_S_contig10102.135.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4399bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10102:212..4610- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10102:212..4610- >mRNA_Ecto-sp13_S_contig10102.135.1 ID=mRNA_Ecto-sp13_S_contig10102.135.1|Name=mRNA_Ecto-sp13_S_contig10102.135.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1569bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10102:212..4610- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |