mRNA_Ecto-sp13_S_contig101.132.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig101.132.1 vs. uniprot
Match: A0A6H5JQJ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQJ6_9PHAE) HSP 1 Score: 294 bits (752), Expect = 1.790e-97 Identity = 162/176 (92.05%), Postives = 167/176 (94.89%), Query Frame = 1 Query: 1 MVGQKSSTFAFAGVSAWLVAGSSAFVLPSLQTARTSAVPSAPSASTSVFCGRPAAVPSASHEATAAGVGRRRGGGRGLRMAESEKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENIKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPQV 528 MVGQKSS FAFAGVSAWLVA SSAFVLPSLQTART+AVPSAPSASTSVFCGRPAAV S+SHEATAAGVGR GLRMAESE+LEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGEN+KGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNP+V Sbjct: 1 MVGQKSSRFAFAGVSAWLVARSSAFVLPSLQTARTAAVPSAPSASTSVFCGRPAAVASSSHEATAAGVGRXXXXXXGLRMAESEELEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPKV 176
BLAST of mRNA_Ecto-sp13_S_contig101.132.1 vs. uniprot
Match: A0A7S2V295_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V295_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.310e-18 Identity = 42/93 (45.16%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 250 EKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENIKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPQV 528 E L++++ KPMG++ EEN FGGL + + + G+A + ++ GDQL+EVQGE++KG FD+ M L+ P +G ++K+FRG A++LYNP+V Sbjct: 52 EFLDITIPKPMGILFEENDSNFGGLYINSINEDGAAAKT-ELKAGDQLVEVQGEDVKGYTFDKAMDALVAGPAEGTQIKIFRGDAAELYNPKV 143
BLAST of mRNA_Ecto-sp13_S_contig101.132.1 vs. uniprot
Match: A0A7S2DNR3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNR3_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.460e-17 Identity = 41/93 (44.09%), Postives = 64/93 (68.82%), Query Frame = 1 Query: 238 MAESEKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENIKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLY 516 M+E ++VSL PMG+V EEN GG+ V ++DGG+A DG++R GDQL+ V G+N++G+DFD + ++D+ + GV + FRG ++LY Sbjct: 101 MSEENYIKVSLSIPMGIVFEENDPSTGGVFVASLSDGGNAVSDGSLRTGDQLVSVNGKNVRGMDFDTCLGMIVDSKDSGVNMIFFRGGVANLY 193
BLAST of mRNA_Ecto-sp13_S_contig101.132.1 vs. uniprot
Match: A0A6U5LP01_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5LP01_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 3.380e-16 Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 256 LEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENIKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNP 522 + V+L+KPMG++ EEN +GG+ V+ + DGGSAQ +GT++ GDQL+ V + G+ FD+ + ++ + E+ KL +FRG LY P Sbjct: 13 VAVALEKPMGIIFEENDEEYGGIFVQSLKDGGSAQVEGTLQPGDQLVGVDTTKVSGMPFDDALNTIISSTEETTKLLMFRGAPKQLYGP 101
BLAST of mRNA_Ecto-sp13_S_contig101.132.1 vs. uniprot
Match: A0A6U1TN17_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1TN17_TRICV) HSP 1 Score: 82.0 bits (201), Expect = 4.200e-16 Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 238 MAESEKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENIKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNP 522 M + + V+L KPMG+V EEN +GG+ V E+ +GG+A ++G+V+ GDQL+ V + G+ FD+ + ++D+ E KL LFRG A D Y P Sbjct: 95 MDPTNYVSVTLTKPMGIVFEENDEKYGGIFVFELKEGGAADQNGSVKPGDQLISVGTNKVSGLPFDDALGVIVDSDESSPKLLLFRGSADDFYGP 189
BLAST of mRNA_Ecto-sp13_S_contig101.132.1 vs. uniprot
Match: A0A6T6DUS8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6DUS8_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 6.110e-16 Identity = 38/95 (40.00%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 238 MAESEKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENIKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNP 522 M E+ + V LKKPMG+V EEN FGG+ ++ + + G+A +G+++ GDQL+ V + G+ FD+ + ++D+P++ +KL LFRG A Y P Sbjct: 94 MDETNYVGVVLKKPMGIVFEENDAKFGGIFIQSIKEDGAAAANGSLKDGDQLVAVGTTKVSGMSFDDALGAIIDSPDEEIKLTLFRGNAKQFYGP 188
BLAST of mRNA_Ecto-sp13_S_contig101.132.1 vs. uniprot
Match: A0A7S1ZHK2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHK2_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.640e-14 Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 238 MAESEKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENIKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNP 522 M + + V+LKKPMG+V EEN FGG+ V + +GG A E+G+++ GDQL+ V + G+ FD+ + ++D+ + KL FRG A +LY P Sbjct: 97 MDTANYVTVALKKPMGIVFEENDEEFGGIFVLSLTEGGIAAENGSIQPGDQLVAVGENKVGGLAFDDALGAIIDSQAEETKLVFFRGSAKNLYGP 191
BLAST of mRNA_Ecto-sp13_S_contig101.132.1 vs. uniprot
Match: A0A7S0HIV4_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HIV4_9EUKA) HSP 1 Score: 61.2 bits (147), Expect = 4.770e-8 Identity = 36/83 (43.37%), Postives = 55/83 (66.27%), Query Frame = 1 Query: 256 LEVSLKKPMGLVLEE-NVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENIKGIDFDEGMKKLMDAPEDGVKLKLFRGL 501 ++++L KP+GLVLEE GG G+ V + +GG+A+E G V+ GD+L V G ++ +DFD M+ L+ APE + L+L R L Sbjct: 54 VDLTLSKPLGLVLEEFGGGGTAGVVVVSLVEGGAAEESGDVQPGDRLSRVDGADVSKLDFDAVMEALVAAPET-LTLRLSRKL 135
BLAST of mRNA_Ecto-sp13_S_contig101.132.1 vs. uniprot
Match: L1K294_GUITC (PPIase cyclophilin-type domain-containing protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K294_GUITC) HSP 1 Score: 57.0 bits (136), Expect = 2.030e-6 Identity = 36/99 (36.36%), Postives = 52/99 (52.53%), Query Frame = 1 Query: 250 EKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQE------DGTVRVGDQLLEVQGENIKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPQV 528 E V++KKPMGLV EEN G+ VK++ D SA + + + + D LL V GE+ G FDE + + P ++L RG +YNP+V Sbjct: 80 EAYTVTMKKPMGLVFEENDSQAKGILVKKI-DKASADQANLFNLENKISIRDYLLRVNGESCLGKSFDEAFAMIAENPAQELELTFARGGVEAVYNPRV 177
BLAST of mRNA_Ecto-sp13_S_contig101.132.1 vs. uniprot
Match: A0A7S1J6Z2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J6Z2_9EUGL) HSP 1 Score: 53.1 bits (126), Expect = 2.470e-5 Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 1 Query: 253 KLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLL 396 + +V+LKKPMGLVLEE+ G G+ V E+ G+A +DGTV+VGDQL+ Sbjct: 104 RYKVTLKKPMGLVLEEDTNG--GIWVAEIVPEGNADKDGTVKVGDQLI 149 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig101.132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig101.132.1 >prot_Ecto-sp13_S_contig101.132.1 ID=prot_Ecto-sp13_S_contig101.132.1|Name=mRNA_Ecto-sp13_S_contig101.132.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp MVGQKSSTFAFAGVSAWLVAGSSAFVLPSLQTARTSAVPSAPSASTSVFCback to top mRNA from alignment at Ecto-sp13_S_contig101:145..4629- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig101.132.1 ID=mRNA_Ecto-sp13_S_contig101.132.1|Name=mRNA_Ecto-sp13_S_contig101.132.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4485bp|location=Sequence derived from alignment at Ecto-sp13_S_contig101:145..4629- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig101:145..4629- >mRNA_Ecto-sp13_S_contig101.132.1 ID=mRNA_Ecto-sp13_S_contig101.132.1|Name=mRNA_Ecto-sp13_S_contig101.132.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=528bp|location=Sequence derived from alignment at Ecto-sp13_S_contig101:145..4629- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |