mRNA_Ecto-sp13_S_contig10097.126.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10097.126.1 vs. uniprot
Match: D8LFF0_ECTSI (Conserved hypothetical protei n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFF0_ECTSI) HSP 1 Score: 357 bits (915), Expect = 1.390e-123 Identity = 175/177 (98.87%), Postives = 177/177 (100.00%), Query Frame = 1 Query: 1 YLDDPMLVPLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPSRPTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEEAKQIADLENI 531 YLDDPMLVPLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPP+RPTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEEAKQIADLEN+ Sbjct: 68 YLDDPMLVPLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPARPTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEEAKQIADLENM 244
BLAST of mRNA_Ecto-sp13_S_contig10097.126.1 vs. uniprot
Match: A0A835Z6Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q3_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.380e-54 Identity = 98/175 (56.00%), Postives = 119/175 (68.00%), Query Frame = 1 Query: 10 DPMLVPLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPSRPTGIQVDKLK-ILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEEAKQIADLENI 531 DPML PL DDY+A GLA C+VM ++ K +E YV+EPLTA TLETI +ETSYK V A D F G PS PTG+ V+ L +L A +CEN VER+LAAART +RR E Q+ G FNF RKRILN +EPSF DNVKQDKSIDVYGR+++ A ++A LEN+ Sbjct: 49 DPMLKPLGADDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETI--HLGVETSYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQLVAVGATRSNFNFQIVRKRILNQVYEPSFADNVKQDKSIDVYGRDDDNAAEVAKLENL 221
BLAST of mRNA_Ecto-sp13_S_contig10097.126.1 vs. uniprot
Match: A0A0G4F5N3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F5N3_VITBC) HSP 1 Score: 175 bits (444), Expect = 5.260e-52 Identity = 95/177 (53.67%), Postives = 121/177 (68.36%), Query Frame = 1 Query: 25 PLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPP-SRPTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEEA--------KQIADLEN 528 PL+ DDY+A GLACC+++ND KL+EY+V EPLTA TLETI + ++TSY+RV A D+FEG + PTG ++ ++ + A E ER LAAART++RR EAQ+ G++ + FNFSTERKRILN KFEPSFDDNVKQ SIDVYGR E E+ KQI +L N Sbjct: 70 PLKSDDYIALGLACCYLLNDKNKLEEYWVIEPLTAGTLETI--DRGVDTSYRRVMALTLGDLFEGDDVNSPTGARLSAVEPMISGEEARFSEALTERVLAAARTFRRRPEAQLLDLGEVADDFNFSTERKRILNQKFEPSFDDNVKQHSSIDVYGRTESESSDEQAELDKQIEELAN 244
BLAST of mRNA_Ecto-sp13_S_contig10097.126.1 vs. uniprot
Match: W7TL97_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL97_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.910e-45 Identity = 86/168 (51.19%), Postives = 112/168 (66.67%), Query Frame = 1 Query: 19 LVPLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPSR-PTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEEAKQIAD 519 LV L +DYVA GLA C+ +ND KLDE V EPLTA TLE +A + TSYKRV ++F G R P+ + ++ L+ L T CE+ + R++AAART+KRRVEAQ+ G++ + FNF+TE+KR+LN FEPSF DNVKQDKSIDVYGR +E+ D Sbjct: 47 LVALNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALG--VPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGRADEDFNDEVD 212
BLAST of mRNA_Ecto-sp13_S_contig10097.126.1 vs. uniprot
Match: A0A7S3K277_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K277_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.290e-34 Identity = 72/168 (42.86%), Postives = 105/168 (62.50%), Query Frame = 1 Query: 28 LEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPSRPTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEEAKQIADLENI 531 L D Y+A GLA + ND+ +DE + EPLTA TLET+ + TSY R+ A +I +G +++D ++ L D T ICEN ER AAART++RR EAQ+ G + + FNF+T+RKR+++ +EPSFDDNVKQ SIDVY R +++ K +++ + Sbjct: 50 LAADAYIAMGLAKVYKTNDDGGVDEMLLIEPLTAGTLETL--ELGVPTSYCRIMATTIGEILDGDQ-----VKLDNIQALIQDDTVSICENMSERAQAAARTFRRRPEAQILDIGSIRDDFNFNTDRKRVIDQIYEPSFDDNVKQHASIDVYNRNDDDEKLSDEIKRL 210
BLAST of mRNA_Ecto-sp13_S_contig10097.126.1 vs. uniprot
Match: A0A7S1DED9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DED9_HEMAN) HSP 1 Score: 125 bits (313), Expect = 2.420e-32 Identity = 78/166 (46.99%), Postives = 97/166 (58.43%), Query Frame = 1 Query: 22 VPLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQS--LETSYKRVTAFHAKDIFEGPPSRPTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTE-RKRILNHKFEPSFDDNVKQDKSIDVYGREEEEAKQ 510 V L +DDY+AFGLA C+ M++ L Y+V EPLT ATLE I Q TSYKRV A D G PTG+ ++ L L AH CE ++R AA RT KRR EAQ+ G++ E + F + KRILN + DDNVKQD SIDVYGR+E K+ Sbjct: 69 VGLTNDDYLAFGLAHCYTMDEG-NLAPYWVVEPLTGATLECITGLQGKGTVTSYKRVMALTVGDAVLGGVEAPTGLNMEALAPLTAGEDAHQCEAALDRAFAAGRTLKRRQEAQVVKVGEICEDYRFDPKVDKRILNAVNVVNDDDNVKQDISIDVYGRKEHGGKE 233
BLAST of mRNA_Ecto-sp13_S_contig10097.126.1 vs. uniprot
Match: M2Y193_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y193_GALSU) HSP 1 Score: 121 bits (303), Expect = 6.040e-31 Identity = 74/161 (45.96%), Postives = 93/161 (57.76%), Query Frame = 1 Query: 28 LEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAF---HAKDIFEGPPSRPTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEE 501 ++ D+Y GLA CF + N KL E V EP+ +TLETI Q + TSYKR+ A A DI PP+ D CEN ER AA RTY+ R+EA+ G++ NFST KR+LN KFEPSF+DNVKQD SIDVYGR+++E Sbjct: 75 VKPDEYTVLGLAFCFQRDSNGKLQELVVIEPVPTSTLETIL--QGVPTSYKRLVATVYSRAMDISSIPPA------------FVEDERVSFCENYSERLQAATRTYRARLEAKKIQLGEVYVTINFSTSPKRVLNEKFEPSFEDNVKQDISIDVYGRKKDE 221
BLAST of mRNA_Ecto-sp13_S_contig10097.126.1 vs. uniprot
Match: A0A7S0BM87_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BM87_9RHOD) HSP 1 Score: 111 bits (278), Expect = 9.720e-28 Identity = 71/154 (46.10%), Postives = 94/154 (61.04%), Query Frame = 1 Query: 37 DDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPSRPTGIQVDKL--KILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGRE 492 +DY+A G+A CF +L+E V EPL++ATLE I S+ + TSYK++ +I E Q++ L +DGD A EN ER AAART+ RR EA++ G++ FSTERKRILN +EP+F+DNVKQD SIDVY RE Sbjct: 36 EDYIALGIAVCFKERVRGELEEVVVVEPLSSATLENI-STMDVPTSYKKIMGMKLGEIPE---------QINDLPGSFIDGD-RAVWGENFQERANAAARTFLRRPEAKLVDLGEISTKVQFSTERKRILNSTWEPNFEDNVKQDISIDVYNRE 178
BLAST of mRNA_Ecto-sp13_S_contig10097.126.1 vs. uniprot
Match: A0A1X6P8L3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8L3_PORUM) HSP 1 Score: 106 bits (264), Expect = 2.260e-25 Identity = 74/174 (42.53%), Postives = 97/174 (55.75%), Query Frame = 1 Query: 28 LEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPSRPTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRR-VEAQMCGYGDLLEG----FNFSTER-KRILNHKFEPSFDDNVKQDKSIDVYGREEEEAKQIADLENI 531 +E DY GLA C+ N N KLD V EPL+ TLE + + TSYKR+ EG P P+ + D L GD +A E+ ER AAART+KRR + + G G++ F T+ +RILN ++EP FDDNVKQDK+IDVYGR EEE AD++ + Sbjct: 44 VEVSDYCPVGLAVCYQRNQNNKLDAVLVVEPLSTGTLENVTGTGQ-PTSYKRILGA----TIEGLPDNPSELPED---FLQGD-SASFSEDFAERMCAAARTFKRRPISKGILGVGEVKTAEDGTLTFCTDGIQRILNEEWEPKFDDNVKQDKTIDVYGRGEEEGG-AADVQKL 207
BLAST of mRNA_Ecto-sp13_S_contig10097.126.1 vs. uniprot
Match: K9TTD0_CHRTP (Uncharacterized protein n=6 Tax=Chroococcidiopsidales TaxID=1890505 RepID=K9TTD0_CHRTP) HSP 1 Score: 88.6 bits (218), Expect = 4.050e-19 Identity = 63/147 (42.86%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 28 LEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPSRPTGIQVDKLKILDGDVT-AHICENPVERTLAAARTYKRRVEAQ-MCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQ 462 L +DYVA GLA CFV + ++ E + EP+ +A LE IA + + TSYK V+A + G DKL+I G T A ++ +R +AAARTYK R A+ + G E FN+STERKR+LN K S DDNVKQ Sbjct: 13 LSSEDYVAIGLATCFVKEEG-EVRELAIIEPIPSAALEAIA--KGIPTSYKLVSATTLGTVLAG----------DKLQIPAGFPTSAQFSDDFGQRAIAAARTYKSRTVAKALIPLGTTREDFNYSTERKRVLNTKRVVSKDDNVKQ 146 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10097.126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10097.126.1 >prot_Ecto-sp13_S_contig10097.126.1 ID=prot_Ecto-sp13_S_contig10097.126.1|Name=mRNA_Ecto-sp13_S_contig10097.126.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp MLVPLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLback to top mRNA from alignment at Ecto-sp13_S_contig10097:1..2869+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10097.126.1 ID=mRNA_Ecto-sp13_S_contig10097.126.1|Name=mRNA_Ecto-sp13_S_contig10097.126.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2869bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10097:1..2869+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10097:1..2869+ >mRNA_Ecto-sp13_S_contig10097.126.1 ID=mRNA_Ecto-sp13_S_contig10097.126.1|Name=mRNA_Ecto-sp13_S_contig10097.126.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=519bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10097:1..2869+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |