mRNA_Ecto-sp13_S_contig10085.116.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10085.116.1 vs. uniprot
Match: D7FYS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS3_ECTSI) HSP 1 Score: 410 bits (1053), Expect = 1.770e-139 Identity = 206/223 (92.38%), Postives = 212/223 (95.07%), Query Frame = 2 Query: 41 MADQTVKTTTSTSEVKEVELDGRGKLKLEVNWGVGIGGGLWSTGILLTEHLAKHAALYDLVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVAAQDDMGAQDLCSVRVEAFDWSSEVPEELGEVPFDVILATDVAYYENLYAPFVQALERTAGEHTLVLLGVTKTDTGPAFFDALDKAGFVYNLVDQASHKGFGLFTVHREQLDERPTL 709 MADQT TTTSTSEVKEVELDGR EVNWGVGIGGGLWSTGILLTEHLAKHAALYD VFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVA+QDDMGAQ LCSVRVEA+DWSSEVPEELGEVPFDVILATDVAYYE+LYAPFVQALERTAG+HTLVLLGVT+TDTGPAFFDALDKAGFVYNLVDQASHKGFGLFTV REQ DERPT+ Sbjct: 1 MADQTAATTTSTSEVKEVELDGRXXXXXEVNWGVGIGGGLWSTGILLTEHLAKHAALYDRVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVASQDDMGAQGLCSVRVEAYDWSSEVPEELGEVPFDVILATDVAYYEHLYAPFVQALERTAGQHTLVLLGVTRTDTGPAFFDALDKAGFVYNLVDQASHKGFGLFTVQREQPDERPTM 223
BLAST of mRNA_Ecto-sp13_S_contig10085.116.1 vs. uniprot
Match: A0A7R9UE36_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE36_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.680e-42 Identity = 88/199 (44.22%), Postives = 122/199 (61.31%), Query Frame = 2 Query: 113 KLKLEVNWGVGIGGGLWSTGILLTEHLAKHAALYDLVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVAAQDDMGAQDLCSVRVEAFDWSSEVPEELGEV--PFDVILATDVAYYENLYAPFVQALERTAGEHTLVLLGVTKTDTGPAFFDALDKAGFVYNLV------DQASHKGFGLFTVHRE 685 +L+LE++W VGIGGG+WS+ L H Y G+RVLELG+GTGL G AA P E+V++D+ HV + +RNV D Q VRVE FDW+ E ++G + PFDV++ TDVAY+E+LY A++RT +V+LGVT++DTGP+FF L K GF Y+ + + ++ FGLFTV RE Sbjct: 22 QLQLELDWSVGIGGGVWSSAEQLVAHFEAQQETYRQTLHGRRVLELGAGTGLAGFGAALVSPLSELVLSDVGEHVTLLRRNVEQNFDTLTQSGVKVRVETFDWTVE---DVGHLDGPFDVLIGTDVAYHESLYEDVANAIDRTLKPDGVVILGVTRSDTGPSFFRELVKRGFNYHRIRDEDMGGKHTNSSFGLFTVWRE 217
BLAST of mRNA_Ecto-sp13_S_contig10085.116.1 vs. uniprot
Match: W7U3Q4_9STRA (Nicotinamide N-methyltransferase, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3Q4_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.820e-41 Identity = 88/207 (42.51%), Postives = 124/207 (59.90%), Query Frame = 2 Query: 113 KLKLEVNWGVGIGGGLWSTGILLTEHLAKHAALYDLVFKGKRVLELGSGTGLVGLAAARFG--PPLEVVITDLESHVDICKRNVAAQDDMGAQDLCSVRVEAFDWSSEVPEE--------LGEVPFDVILATDVAYYENLYAPFVQALERTAGEHTLVLLGVTKTDTGPAFFDALDKAGFVYNLVDQASHK-------GFGLFTVHR 682 +L LE W VGIGGG+W+TG+LL E+ ++A + V GKR++E+GSGTGLV L+ A P E+V+TD + H+D+ +RN+ A A+ +RV+ F+W + + L +PFDV++ TDVAY + LY P V AL R +G H+L+LLGVT+TDT P FF L + GF Y L A + GF L +V R Sbjct: 55 ELTLETQWNVGIGGGIWTTGLLLCEYFGRNATFFSKVLYGKRIIEIGSGTGLVALSLATNALFKPQEIVVTDQKDHLDLIERNICANI---AKMKAPIRVQEFNWLKDKETKNTDSKVKALCALPFDVVVGTDVAYCQELYGPVVHALCRLSGPHSLILLGVTRTDTNPRFFQLLQEEGFDYCLTPVADGESSCTVAGGFALLSVVR 258
BLAST of mRNA_Ecto-sp13_S_contig10085.116.1 vs. uniprot
Match: A0A835Z9W6_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W6_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.790e-38 Identity = 80/198 (40.40%), Postives = 110/198 (55.56%), Query Frame = 2 Query: 116 LKLEVNWGVGIGGGLWSTGILLTEHLAKHAALYDLVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVAAQDDMGAQDLCSVRVEAFDWSS-EVPE-------ELGEVPFDVILATDVAYYENLYAPFVQALERTAGEHTLVLLGVTKTDTGPAFFDALDKAGF-VYNLVDQASHKGFGLFTVHR 682 L ++ +WGVGIGG LWS +L+ ++ + L+ + G RVLELG+GTG++ LA+A P ++ITD SH+DIC+ NV + AF W VP E G FDV+L D+AY+ +LY P + AL G T+V LGVTK DT P FF LD+AGF Y++ A F +FT+ R Sbjct: 27 LSIKCDWGVGIGGHLWSCAMLMIRYMQQERELFSRILDGARVLELGAGTGMLSLASAALYDPRSIIITDQLSHIDICQHNVDRNSHNMFNKSLEIEARAFSWGDGNVPALISSDSAERGAASFDVVLGADLAYFSHLYQPLIAALVDVVGPKTVVFLGVTKADTDPTFFRLLDEAGFRFYDMSSGADTANFTIFTIFR 224
BLAST of mRNA_Ecto-sp13_S_contig10085.116.1 vs. uniprot
Match: A0A7S1U640_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U640_9STRA) HSP 1 Score: 149 bits (376), Expect = 3.300e-38 Identity = 83/198 (41.92%), Postives = 119/198 (60.10%), Query Frame = 2 Query: 113 KLKLEVNWGVGIGGGLWSTGILLTEHLAKHAALYDLVFKGKRVLELGSGTGLVGLAAARF-GPPLEVVITDLESHVDICKRNVAAQDDMGAQDLCSVRVEAFDWS-SEVPEELGEVPFDVILATDVAYYENLYAPFVQALERTAGEHTLVLLGVTKTDTGPAFFDALDKAGFVYNLVDQASHKG------FGLFTVHR 682 +++L NW VGIGGG+WS H+ H Y+ ++G+RV+ELG+GTGL G AAA G EVV+TD+ HV++ + N+ + SVRVE FDW+ ++ E LG FDV++ TDVAY+E+LY A++ T + +V+LGVT+ DTGP+FF A + GF Y+ VD++ G F LF R Sbjct: 37 EIQLTTNWDVGIGGGVWSAAEQFLGHVGAHRDFYEQKWRGRRVIELGAGTGLAGFAAALVAGAGAEVVLTDIGEHVEMLRENLKLNAQLMEASGASVRVEEFDWAKADEVEHLGG-KFDVVVGTDVAYHEDLYDDVAAAIDATTKDDGVVVLGVTRLDTGPSFFRAFEARGFTYHRVDESLMGGAHTKSSFALFLAWR 233
BLAST of mRNA_Ecto-sp13_S_contig10085.116.1 vs. uniprot
Match: K3WJ30_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJ30_GLOUD) HSP 1 Score: 142 bits (357), Expect = 1.970e-35 Identity = 86/202 (42.57%), Postives = 110/202 (54.46%), Query Frame = 2 Query: 116 LKLEVNWGVGIGGGLWSTGILLTEHLAKHAALYDLVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVAAQDDMGAQDLCSVRVEAFDWSSEVPE-----ELGE--VPFDVILATDVAYYENLYAPFVQALERTAGEHTLVLLGVTKTDTGPAFFDALDKAGFVY------NLVDQASHKGFGLFTVHR 682 L+ +W +GIGG +W++G +L EHL A Y +F+GK VLELGSGTG VGL A P V +TDL SHV +RNVA + + +V V W S V E +LG+ DVIL TDVAY LY P + L A +HTLVLLG+ + DT +FF L+ GF Y L + K FGLF + R Sbjct: 38 LRFHCDWDIGIGGSIWTSGQILAEHLQSQQARYRALFQGKNVLELGSGTGYVGLMTAVCFEPANVFLTDLASHVACLERNVALNASV-LRPHVNVHVTELAWGSTVHETALLEKLGDDNTHIDVILGTDVAYLRELYDPLLHTLRHVASQHTLVLLGLNRADTDISFFQRLELDGFEYYKISEDQLPTEYHGKDFGLFEIRR 238
BLAST of mRNA_Ecto-sp13_S_contig10085.116.1 vs. uniprot
Match: A0A5D6YE76_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE76_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.940e-35 Identity = 90/205 (43.90%), Postives = 114/205 (55.61%), Query Frame = 2 Query: 116 LKLEVNWGVGIGGGLWSTGILLTEHLAKHAALYDLVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVAAQDDMGAQDLCSVRVEAFDWSSEVPEE-----LGEVP-----FDVILATDVAYYENLYAPFVQALERTAGEHTLVLLGVTKTDTGPAFFDALDKAGFVYNLV-DQASH-----KGFGLFTVHR 682 L+ +W VGIGG +W++G +L HL +HA Y +F GK VLELGSGTG VGL A P V++TDL +HV +RNVA + VRV W S E+ LG+ DVI+ TDVAY LY P + +L R AGE TLVLLG+ + DT AFF L++ GF Y V D+ H K FGLF + R Sbjct: 31 LRFACDWDVGIGGSVWTSGQVLAGHLQQHADKYRPLFAGKCVLELGSGTGFVGLMTAVCFAPARVLLTDLATHVASLERNVALNAAL-LPPSTRVRVAELSWGSAEQEDALLASLGDGADTVDTVDVIIGTDVAYLHELYEPLLHSLRRLAGEQTLVLLGLNRADTDTAFFTRLEQDGFEYYKVPDEQLHRDYHGKDFGLFEIRR 234
BLAST of mRNA_Ecto-sp13_S_contig10085.116.1 vs. uniprot
Match: A0A1V9ZGF1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGF1_9STRA) HSP 1 Score: 137 bits (344), Expect = 6.690e-34 Identity = 82/195 (42.05%), Postives = 113/195 (57.95%), Query Frame = 2 Query: 116 LKLEVNWGVGIGGGLWSTGILLTEHLAKHAALYDLVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVAAQDDMGAQDLCSVRVEAFDWSSEVPEELGEVPFDVILATDVAYYENLYAPFVQALERTAGEHTLVLLGVTKTDTGPAFFDALDKAGFVYNLVDQA------SHKGFGLFTVHR 682 ++L +WGVGIGG LW++G L+ ++ ++H + G RVLELGSGTGLVGLA A GP V +TDL SHV + NVA D + ++ V A DW++ P + P D I+ TD+AY YAP + L+R AG +T +L+G+ + DT FF L AGF Y VD++ K FGLF + R Sbjct: 22 VELGCDWGVGIGGSLWTSGRLMVDYFSRHEPARRQL-AGARVLELGSGTGLVGLAVALMGPA-HVALTDLASHVAALEANVARNADRIPAET-TITVSALDWNA--PPPTPDAPLDWIVGTDIAYSPAFYAPLLATLQRLAGPNTRILVGLGRHDTDRRFFQLLHDAGFSYYKVDESLMSQEFHGKDFGLFEIRR 211
BLAST of mRNA_Ecto-sp13_S_contig10085.116.1 vs. uniprot
Match: A0A2D4BZQ6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZQ6_PYTIN) HSP 1 Score: 137 bits (346), Expect = 8.270e-34 Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 113 KLKLEVNWGVGIGGGLWSTGILLTEHLAKHAALYDLVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVAAQDDMGAQDLCSVRVEAFDWSSEVPEE-----LGEVP--FDVILATDVAYYENLYAPFVQALERTAGEHTLVLLGVTKTDTGPAFFDALDKAGF-VYNLVDQA---SHKG--FGLFTVHR 682 +L + +W VGIGG +W++G +LT HL H Y +F+GK V+ELGSGTG VGL AA P +VV+TDL SH+D +RN+ Q VR W + E+ LG D++L TD+AY Y P + L R TLVL+G+ ++DTG FF L++ GF Y L D+ H+G FGLF + R Sbjct: 33 ELAFQCDWDVGIGGSVWTSGEILTAHLEMHQEQYREIFQGKSVVELGSGTGYVGLLAAACFQPAQVVLTDLASHLDCMQRNIDGNR-TAVQPGVHVRAAELCWGCDAHEDALLASLGVTGRGVDIVLGTDIAYLTEFYEPILHTLRRITHSETLVLIGLNRSDTGMQFFRRLEQEGFEYYKLSDRQLPREHRGKDFGLFQIRR 234
BLAST of mRNA_Ecto-sp13_S_contig10085.116.1 vs. uniprot
Match: A0A1V9ZYN4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYN4_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.090e-33 Identity = 82/199 (41.21%), Postives = 115/199 (57.79%), Query Frame = 2 Query: 104 GRGKLKLEVNWGVGIGGGLWSTGILLTEHLAKHAALYDLVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVAAQDDMGAQDLCSVRVEAFDWSSEVPEELGEVPFDVILATDVAYYENLYAPFVQALERTAGEHTLVLLGVTKTDTGPAFFDALDKAGFVYNLVDQA------SHKGFGLFTVHR 682 G ++LE NW VGIGG LW++G LL ++L+++ + + +G RVLELGSGTGLVGLA A FGP VV+TDLE+HV + NV +V VEA DW++ P+ +G+ F+ I+ TD+AY + Y P + L + T + LG+ + DT FF L AGF Y + +A K FGLF + R Sbjct: 10 GDSSIELECNWDVGIGGSLWTSGRLLVDYLSRNGVVRQEI-EGTRVLELGSGTGLVGLAVALFGPA-SVVLTDLETHVAALENNVKRNAGR-IPSRTNVTVEALDWNA--PKNVGDGVFEWIVGTDIAYSRSFYVPLLNTLTLFGTKKTKIQLGLGRDDTEMQFFKMLQDAGFEYYKISEAFVASEFHGKDFGLFEIRR 203 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10085.116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10085.116.1 >prot_Ecto-sp13_S_contig10085.116.1 ID=prot_Ecto-sp13_S_contig10085.116.1|Name=mRNA_Ecto-sp13_S_contig10085.116.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp MADQTVKTTTSTSEVKEVELDGRGKLKLEVNWGVGIGGGLWSTGILLTEHback to top mRNA from alignment at Ecto-sp13_S_contig10085:201..3652+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10085.116.1 ID=mRNA_Ecto-sp13_S_contig10085.116.1|Name=mRNA_Ecto-sp13_S_contig10085.116.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3452bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10085:201..3652+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10085:201..3652+ >mRNA_Ecto-sp13_S_contig10085.116.1 ID=mRNA_Ecto-sp13_S_contig10085.116.1|Name=mRNA_Ecto-sp13_S_contig10085.116.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10085:201..3652+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |