mRNA_Ecto-sp13_S_contig1008.109.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: D7FU15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU15_ECTSI) HSP 1 Score: 529 bits (1363), Expect = 1.810e-189 Identity = 269/273 (98.53%), Postives = 271/273 (99.27%), Query Frame = 2 Query: 32 MAGGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGSNFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRAVEE 850 MAGGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFD TTNMGSNFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAV+VKDYMERNLAPADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEG+GFAVRGMSKNLVAVAIPITVTIF TDVLVRAVEE Sbjct: 1 MAGGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDTTTNMGSNFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVSVKDYMERNLAPADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGSGFAVRGMSKNLVAVAIPITVTIFVTDVLVRAVEE 273
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A835YRL8_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL8_9STRA) HSP 1 Score: 345 bits (886), Expect = 1.510e-116 Identity = 182/274 (66.42%), Postives = 213/274 (77.74%), Query Frame = 2 Query: 38 GGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDR--TTNMGS---NFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHG-DRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRA 841 G KS H CH AS +AA++NFPLW+A+AIGQSGFD+ TT G+ F QRY AL+PPYKGV ATI GMTWARAFIFYGSD GK LE G S+ + VA+PPL+ S+ VQL+N PIIRASIT+QNP + S+V ++L +Y+ G+ LWHGTSAGVMKTVPKYCVAV VKDYME L P + WG WRSA+KSVAAGVAGAALTNP+DVLRNEMFKTDLGVR AL+KL EEGA +A RGM+KNLVAV+IPI +TIF TDVL+RA Sbjct: 5 GDKSQHFMCHLTASAMAAVVNFPLWKASAIGQSGFDKVLTTEGGAVPVTFLQRYAAALRPPYKGVTATIGGMTWARAFIFYGSDWGKLYLERRGVESKTICVALPPLLCSSTVQLVNQPIIRASITLQNPQCEHSTVPQALRHLYKTRGLSGLWHGTSAGVMKTVPKYCVAVAVKDYMEGVLDPPNPELGSWGAAWRSAKKSVAAGVAGAALTNPVDVLRNEMFKTDLGVRQALSKLIHEEGAQWATRGMTKNLVAVSIPIGLTIFFTDVLIRA 278
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A1Z5JEI3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEI3_FISSO) HSP 1 Score: 281 bits (720), Expect = 1.270e-91 Identity = 151/272 (55.51%), Postives = 188/272 (69.12%), Query Frame = 2 Query: 38 GGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGSNFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAP-ADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRAVEE 850 GG +P + AS +AA IN+PLWRA+AIGQSGF + Y+ A PPYKG AT++GMTWARA IF+GSD GK +L ++G + TV +PPLV STVVQ +NMP++RA+ITIQ+P SK +V +L IY+ G LWHGTSAGV+K+VPKYC AV VK +ME L P D +R LWRSA KS AAG+AGAALTNPLDV+RNEMFKT+L + + KL RE G F RG+ KN+VAVAIP+ TIF TD LV ++ Sbjct: 2 GGTKDYPREYLIASALAATINYPLWRASAIGQSGFVVESARIPALLSPYVHAFAPPYKGALATVLGMTWARAGIFWGSDYGKEQLMQMGMAESAATV-LPPLVVSTVVQCVNMPLVRATITIQDPQSKLPNVAAALRYIYQTHGWAGLWHGTSAGVLKSVPKYCTAVVVKGFMEDWLPPPTDPSER---LWRSAYKSAAAGIAGAALTNPLDVIRNEMFKTNLELTATVQKLWRELGVRFLARGLGKNMVAVAIPVACTIFFTDALVHRTQQ 269
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7R9YDC2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDC2_9STRA) HSP 1 Score: 276 bits (706), Expect = 3.030e-89 Identity = 148/266 (55.64%), Postives = 188/266 (70.68%), Query Frame = 2 Query: 41 GKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGSNFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVR 838 G P +F AS VAA+INFPLW+A+AIGQSGF R G+ Q Y+EALKPPYKGV + GMTWARA IF+GSD G+++L+E + ++ AVPPL+ ST VQ+ N PIIRASIT+Q+P + S + I R+ GV ALWHGTSAG+MKTVPKYC A+ KDY+E L P+D G R G L RSA K+V AGVAGA +TNP DV+RNEMFKT+ + + +L +EE FA RG++KN+VAV+IP+ TIF TD+ R Sbjct: 30 GSRKRPLPYFLASSVAAVINFPLWKASAIGQSGF-RVKARGNGALQLYIEALKPPYKGVGVVVFGMTWARAAIFFGSDWGRQRLKET-HVHDLLASAVPPLITSTFVQICNQPIIRASITLQDPSANHPSTWSVIRDICRRHGVAALWHGTSAGIMKTVPKYCCAILTKDYLEDKLPPSD-GTRQGDLQRSAVKAVIAGVAGAVITNPFDVIRNEMFKTNQSLVAVVRRLGKEEPQ-FATRGLTKNIVAVSIPVACTIFFTDLFSR 291
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7S1UGC6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGC6_9STRA) HSP 1 Score: 270 bits (689), Expect = 7.940e-87 Identity = 142/268 (52.99%), Postives = 191/268 (71.27%), Query Frame = 2 Query: 56 PECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGS--NFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGY-SSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRAVEE 850 P + +S +AA++NFPLW+A+AIGQSGF ++ G+ YLEALKPPYKGV + GMTWARA IF+GSD G+++L+E S ++ A+PPLV STVVQ+ N PIIRASIT+Q+P +++ + + +I R+ GV ALWHGTSAG+MKTVPKYC A+ KDY+E L +D G R G L RSA K+V AG+AGA +TNP DV+RNEMFKT+ + + + +L REE FA RG+ KN+VAV+IP+ TIF TD+ A+ + Sbjct: 16 PLPYLLSSSLAAVVNFPLWKASAIGQSGFKVKSHGGAATTALNLYLEALKPPYKGVGVVVFGMTWARAAIFFGSDLGRQQLKERRLVRSELLASALPPLVTSTVVQVCNQPIIRASITLQDPQTQYDNTLAVMRSIARRHGVAALWHGTSAGIMKTVPKYCTAIMAKDYLEDRLPQSD-GTRAGALVRSATKAVLAGMAGAIITNPFDVVRNEMFKTNQSLTEVITRLYREE-PNFATRGLGKNVVAVSIPVACTIFFTDLFTSALYD 281
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7S4KCS5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCS5_9STRA) HSP 1 Score: 269 bits (688), Expect = 1.950e-86 Identity = 148/287 (51.57%), Postives = 191/287 (66.55%), Query Frame = 2 Query: 32 MAGGKSS--HPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGSNFFQRY-----------LEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEEL--GYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGD---RWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVR 838 M GG + HP + AS ++A IN+PLWRA+A+GQSGF + L A PPY+G++ATI+GMTWARA IF+GSDRGK L E G + TV +PPL ST+VQ++N PI+RASIT+QNP++ ++R+SL IY G+G +WHGTSAG++KTVPKYC AV +KD ME L P D LWRSA KS AAG+AGAALTNPLDV+RNEMFKT+ G+R+ + LR G F +RG+ KN+VAVAIP++ TIF TD L++ Sbjct: 1 MGGGSLAREHPWDYLGASALSATINYPLWRASAVGQSGFRVLASSVPGVLSGVVPHVPPSVAPLLYAFAPPYRGLSATILGMTWARAAIFWGSDRGKDLLRENFPGMHPGMSTV-LPPLAVSTMVQIVNQPIVRASITLQNPETDLRTIRQSLRFIYVNHGLGGMWHGTSAGILKTVPKYCTAVVIKDLMEEILPPVDTSSPSAERDALWRSAYKSSAAGLAGAALTNPLDVIRNEMFKTNHGLRETVRNLRESLGWRFMIRGIGKNMVAVAIPVSCTIFFTDALIQ 286
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7S1ZAZ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAZ4_TRICV) HSP 1 Score: 269 bits (687), Expect = 2.280e-86 Identity = 151/290 (52.07%), Postives = 192/290 (66.21%), Query Frame = 2 Query: 32 MAGGKSS--HPECHFAASGVAAIINFPLWRAAAIGQSGF--------DRTTNMGSNFFQRY---LEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRV-VTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGD---RWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRAVEE 850 M GG ++ HP + AS ++A IN+PLWRA+A+GQSGF + + S L A PPY+G+ ATI+GMTWARA IF+GSDRGK L V +PPLV ST+VQ++N P++RA+IT+QNP+S +VR +L IYR G+ LWHGTSAGV+KTVPKYC AV VKD ME L PAD LWRSA KS AAG+AGAALTNPLDV+RNEMFKT+ G+ + + LR+E G F +RG+ KN+VAVAIP++ TIF TD L++ E Sbjct: 1 MGGGTTARDHPGEYLLASAMSASINYPLWRASAVGQSGFRVAAASVPPAVSGLVSAVHPSVAPILYAFAPPYRGLTATILGMTWARAAIFWGSDRGKEALRASAPGMHPSVHALLPPLVVSTLVQIVNQPLVRATITLQNPESDLLNVRSALRQIYRAHGLSGLWHGTSAGVLKTVPKYCTAVVVKDAMEDWLPPADPSSPTFESDKLWRSAYKSSAAGLAGAALTNPLDVIRNEMFKTNRGLVETVHNLRKELGWRFMIRGIGKNMVAVAIPVSCTIFFTDALIQVSER 290
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: B7GD97_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GD97_PHATC) HSP 1 Score: 268 bits (684), Expect = 5.000e-86 Identity = 151/285 (52.98%), Postives = 189/285 (66.32%), Query Frame = 2 Query: 32 MAGGKSS-----HPECHFAASGVAAIINFPLWRAAAIGQSGFD-RTTNMGSNFFQR----YLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPAD------HGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVR 838 MAGG + HP + AS +AA IN+PLWRA+A QSGF ++ + Y+ A PPYKG+ AT++GMTWARA IF+GSD G+ L G++ TVA PPLV ST VQ INMP++R++IT+QNP S +V S+ IY GV LWHGTSAG++KTVPKY AV VKD+ME+ L PAD H DR LWRSA KS AGVAGAALTNPLDV+RNEMFKT+LG+ + L+ EG F RG+ KNL+AVAIP+ TIF TD +++ Sbjct: 1 MAGGSGTGVAKEHPWEYLMASALAATINYPLWRASATAQSGFRIAPVHIAGHAIPSGVAPYVYAFLPPYKGMLATVLGMTWARAAIFWGSDYGRDILRTGGWNDGFATVA-PPLVVSTAVQCINMPLVRSTITLQNPQSHLRTVSASVQQIYNSHGVQGLWHGTSAGILKTVPKYITAVVVKDWMEQALPPADPLSKTYHQDR---LWRSAAKSAMAGVAGAALTNPLDVIRNEMFKTNLGLAATVRHLQETEGYAFVYRGLGKNLIAVAIPVGCTIFFTDAMIQ 281
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7S3L599_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L599_9STRA) HSP 1 Score: 260 bits (664), Expect = 7.090e-83 Identity = 141/274 (51.46%), Postives = 184/274 (67.15%), Query Frame = 2 Query: 53 HPECHFAASGVAAIINFPLWRAAAIGQSGF--DRTTNMGSNF---FQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNL-------APADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVR 838 +P +F A+ +AA IN+PLWRA+A+ QSGF G Y+ A PPYKG+ AT+ GMTWARA IF+GSD GK L++ VV +PPL ST VQ +NMP++RA+ITIQNP S +V +L I + G+ ALWHGTSAG++KTVPKYC AV VKD+M+ ++ +P H DR LWRSA KSV AGVAGAALTNPLDV+RN+MF+T+ G+R+ + L +EG F +G+ KN++AVAIP+ TIF TD LV+ Sbjct: 9 YPLEYFGAAALAAAINYPLWRASALAQSGFAVPEMVLAGQRLPSALAPYVFAFGPPYKGLVATVAGMTWARAAIFWGSDAGKAWLKQYETCPDVVATLLPPLAVSTAVQCVNMPLVRATITIQNPSSTLPTVPAALRHIAQHHGLPALWHGTSAGILKTVPKYCTAVVVKDFMDEHVLEPVDPTSPTAHTDR---LWRSATKSVVAGVAGAALTNPLDVIRNKMFQTNQGLRETVQVLYEKEGWAFLHKGLGKNMIAVAIPVACTIFFTDSLVQ 279
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7S3PVJ4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVJ4_9STRA) HSP 1 Score: 261 bits (666), Expect = 1.170e-82 Identity = 152/332 (45.78%), Postives = 194/332 (58.43%), Query Frame = 2 Query: 32 MAGGKSS--HPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTN----------MGSNF---------------------------FQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEE--------LGYSSRV---VTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGD---------RWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRAVEE 850 M GG + HP + AS ++A+IN+PLWRA+A+GQSGF T M +N + YL + PPYKG+ ATI GMTWARA IFYGSDRGK L++ LG + V PPLV S +VQ +N P++RASIT+QNP S+ ++RESL IYR G+ LWHGT+AG++KTVPKYC A+ VKDYME L + T+ RSA KS AG+AGA LTNP+DV+RNEMFKT+L + D +AKLR E G F RG+ KNLVAV+IP+ TIF TD+ ++ EE Sbjct: 1 MGGGSKAKDHPLAYLGASSISALINYPLWRASAMGQSGFRVTPEILVDGMNIKPMSTNLKTIGIHLNPKHVQQQYIKPLVEAIPSTIRPYLHSFTPPYKGMVATIAGMTWARAAIFYGSDRGKDYLQQHQSTYVPSLGRDVVLPLSVITLTPPLVTSIMVQCVNQPVVRASITLQNPSSEMKNIRESLKYIYRNFGIKGLWHGTNAGILKTVPKYCTAIIVKDYMEEVLPKISESSSSSSSPEEYKRNTMIRSACKSATAGIAGAILTNPVDVIRNEMFKTNLSLIDTVAKLRGEMGWNFCTRGIGKNLVAVSIPVASTIFFTDLFIQMSEE 332 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1008.109.1 >prot_Ecto-sp13_S_contig1008.109.1 ID=prot_Ecto-sp13_S_contig1008.109.1|Name=mRNA_Ecto-sp13_S_contig1008.109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp MAGGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGSNFFQRback to top mRNA from alignment at Ecto-sp13_S_contig1008:9805..13201+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1008.109.1 ID=mRNA_Ecto-sp13_S_contig1008.109.1|Name=mRNA_Ecto-sp13_S_contig1008.109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3397bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1008:9805..13201+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1008:9805..13201+ >mRNA_Ecto-sp13_S_contig1008.109.1 ID=mRNA_Ecto-sp13_S_contig1008.109.1|Name=mRNA_Ecto-sp13_S_contig1008.109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1008:9805..13201+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |