mRNA_Ecto-sp13_S_contig10076.103.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10076.103.1 vs. uniprot
Match: D8LHB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB2_ECTSI) HSP 1 Score: 706 bits (1823), Expect = 6.810e-253 Identity = 377/404 (93.32%), Postives = 383/404 (94.80%), Query Frame = 1 Query: 31 FDGGYGGRGLGFNTYFGPSPFDFFYYRPYYGYYGTPVGRGGQRGDPEEMGILESIFSFIFGDGDPNADMEQRRVEAAAKLIRGNGGAVSAEQLAPLLTPETLRSSDSSVVDESFVLPILTALDGAPEVTANGDIVYVFPSLQTSAMGTGTAATQIESKESARLAGLKSLSTADLRIALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPRMSRGSSXXXXXXXRGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQARLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGINQDDDLLDDFDTRLKSSK 1242 FDGGYGGRG+GFNTYFGPSPFDFFYYRPYYGYYGTPVGRGGQRGDPEEMGILESIFSFIFGDGDPNADM+QRRVEAAA LIRGNGGAVSAEQLAPLLTPE LRSSDSSVVDESFVLPILTALDGAPEVTA+GDIVYVFPSLQTSAMGTGTAATQI SKESARLAGLKSLSTADLR+ALEAVGVRAMSMFERSELID AMAAGIAKLDNGNIVLEPR SRGSS RGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYL+QLLSGPAFAGVTLPGYYGFVQ GALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSG AV+SRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGINQDDDLLDDFD RLKSSK Sbjct: 153 FDGGYGGRGIGFNTYFGPSPFDFFYYRPYYGYYGTPVGRGGQRGDPEEMGILESIFSFIFGDGDPNADMDQRRVEAAATLIRGNGGAVSAEQLAPLLTPEALRSSDSSVVDESFVLPILTALDGAPEVTADGDIVYVFPSLQTSAMGTGTAATQIGSKESARLAGLKSLSTADLRVALEAVGVRAMSMFERSELIDAAMAAGIAKLDNGNIVLEPRTSRGSSSSSGGG-RGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLRQLLSGPAFAGVTLPGYYGFVQ-------GALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGGAVVSRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGINQDDDLLDDFDARLKSSK 548
BLAST of mRNA_Ecto-sp13_S_contig10076.103.1 vs. uniprot
Match: A0A6H5L6N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N5_9PHAE) HSP 1 Score: 513 bits (1321), Expect = 3.110e-180 Identity = 290/355 (81.69%), Postives = 295/355 (83.10%), Query Frame = 1 Query: 181 ILESIFSFIFGDGDPNADMEQRRVEAAAKLIRGNGGAVSAEQLAPLLTPETLRSSDSSVVDESFVLPILTALDGAPEVTANGDIVYVFPSLQTSAMGTGTAATQIESKESARLAGLKSLSTADLRIALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPRMSRGSSXXXXXXXRGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQARLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGINQDDDLLDDFDTRLKSSKE 1245 ILESIFSFIFGDGDPNADM+QRRVEAAA VTA+GDIVYVFPSLQTSAMGTGTAATQI SKE+ARLAGLKSLSTADLR+ALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPR SRGSS RGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQA LLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGINQDDDLLDDFD RL+SSKE Sbjct: 10 ILESIFSFIFGDGDPNADMDQRRVEAAAT------------------------------------------------VTADGDIVYVFPSLQTSAMGTGTAATQIGSKENARLAGLKSLSTADLRVALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPRTSRGSSSSSGGG-RGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQASLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGINQDDDLLDDFDARLRSSKE 315
BLAST of mRNA_Ecto-sp13_S_contig10076.103.1 vs. uniprot
Match: A0A7S2JVL0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JVL0_9STRA) HSP 1 Score: 289 bits (740), Expect = 6.250e-89 Identity = 186/397 (46.85%), Postives = 239/397 (60.20%), Query Frame = 1 Query: 58 LGFNTYFGPSPFDFFYYRPYYGYYGTPVGRGGQRGDPEEMGILESIFSFIFGDGDPNADMEQRRVEAAAKLIRGNGGAVSAEQLAPLLTPETLRSS-----DSSVVDESFVLPILTALDGAPEVTANGDIVYVFPSLQTSAMGTGTAATQIESKESARLAGLK-SLSTADLRIALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPRMSRGSSXXXXXXXRGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQARLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGINQDDDLLDDFDTRL 1230 GF FGPSPFDFFYYRPYYGYYG PV + +PEEMG LES FS+IFGDG+PN+D+EQRR++AAA IR +GG V+AEQLAP + +S D+S VDESFVLPI++ L G P+VT +GDIVY FP LQ SA GT +ES GL S ST D+ LE+ GV+ E+S+LID + + G+I + + E+ FSVA +KF AG LGA+NLGGALYL +LS PA AGVTLPGYYG VQ+ A P LL YA+ N+IPA RF ++N +I RN RR+W A R+ I+RKLKAAK + T ++ + EDV Y T ++++D+ + ++ D L DFD L Sbjct: 217 FGFGGIFGPSPFDFFYYRPYYGYYGRPVYL--RERNPEEMGFLESTFSYIFGDGNPNSDLEQRRLKAAAAEIRRSGGVVTAEQLAPFVDAPKPSASIDDVDDASYVDESFVLPIVSTLGGEPQVTNDGDIVYKFPELQLSATGT------LES------VGLPPSASTRDIINFLESQGVQTRGALEKSDLID--VLGSLEDAVGGDISI------------------------VEEQEYKFSVAGDTQKFFAGALGAINLGGALYLGNMLSSPALAGVTLPGYYGLVQS-------AFPLLLGYAILYNIIPAARFAWIGKQNEEIRQRNQSRRQWLTAIRASRGRIARKLKAAKGLGTKLRRVDTEDVIYDTKESISDEDMRRETDALRDFDKLL 566
BLAST of mRNA_Ecto-sp13_S_contig10076.103.1 vs. uniprot
Match: A0A836C8Z4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z4_9STRA) HSP 1 Score: 279 bits (713), Expect = 5.660e-85 Identity = 176/392 (44.90%), Postives = 231/392 (58.93%), Query Frame = 1 Query: 67 NTYFGPSPFDFFYYRPYYGYYGTPVGRGGQRGDPEEMGILESIFSFIFGDGDPNADMEQRRVEAAAKLIRGNGGAVSAEQLAPLLTPETLRSSD---SSVVDESFVLPILTALDGAPEVTANGDIVYVFPSLQTSAMGTGTAATQIESKESARLAGLKSLSTADLRIALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPRMSRGSSXXXXXXXRGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQARLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGINQDDDLLDDFDTRLK 1233 + Y+GPSP DF YYRP YGYY P R + DP EMG LES FS+IFGDGDPNAD+E RR++ AK++R NGGAV+AEQLAP L P R ++VVDESFVLP +TAL G P VT +GDIVYVFP LQT+A+ A+ E +E L+ S ++L+ ++ + + +FE+ E++ ++ ++ + V +P L EE PFSVA+ KFAA LGAVNLGGALYL+ LL AGV GY VQ GA+P LL YAVA NVIP VR++ NK +NA+IE RN R W+ + RK+ AA+ ++T++KV+ D+ YTTAK LA+Q DDFD RL+ Sbjct: 215 SMYWGPSPLDFLYYRPSYGYYNLP--RSQRSSDPGEMGFLESTFSYIFGDGDPNADIEARRLQLIAKVVRANGGAVTAEQLAPYLDPPAPRGGAQGATAVVDESFVLPAVTALKGEPRVTDDGDIVYVFPDLQTTAV----ASLDPELRE------LEGKSPSELKQLMQQRRIYSGDVFEKGEMVRRLQSSALS-----------------------VTKTVDVPPTLQEEPIPFSVASPGNKFAAAALGAVNLGGALYLRSLLGSAVAAGVQFGGYAAAVQ-------GAMPLLLGYAVAFNVIPLVRWLRNKAKNAEIEQRNDARMAWSRLIAAATPNNKRKMMAARKLSTELKVLGQGDIAYTTAKDLAEQQQELAGSAFDDFDRRLR 564
BLAST of mRNA_Ecto-sp13_S_contig10076.103.1 vs. uniprot
Match: A0A7S4EMF0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EMF0_9STRA) HSP 1 Score: 254 bits (650), Expect = 4.620e-75 Identity = 163/395 (41.27%), Postives = 225/395 (56.96%), Query Frame = 1 Query: 73 YFGPSPFDFFYYRPY--YGYYGTPVGRGGQRGDPEEMGILESIFSFIFGDGDPNADMEQRRVEAAAKLIRGNGGAVSAEQLAPLLTPETLR--SSDSSVVDESFVLPILTALDGAPEVTANGDIVYVFPSLQTSAMGTGTAATQIESKESARLAGLK-SLSTADLRIALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPRMSRGSSXXXXXXXRGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQARLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGINQDDDLLDDFDTRLKSSK 1242 ++GPSPFDFFYYRPY YGYYG + G R DPE+MG LES+FS++FGDG+PNA +E++R+ AA++IR N GAV+AEQLAP + SS SS VDESFVLPI++ LDG P VT GDI+YVFP LQ SA + ES + AGL+ S+ +++ L G+ ++++L++ +LE + + ++ P L E FS+A+G KF AG LG NLGG LYL +L S GV LPG+ G Q P L+ YA+ N+IP R N+++NA+I+GRN R+KW E RS + + RKLKAA T+ K++K +D Y T ++ + +D LD FD+ L K Sbjct: 250 FWGPSPFDFFYYRPYGSYGYYGQTIDDGVVR-DPEDMGFLESVFSYVFGDGNPNAGLEEKRLSLAAQVIRDNKGAVTAEQLAPYCDAPDVSDSSSPSSFVDESFVLPIVSQLDGEPRVTEEGDIIYVFPDLQVSASSSNILPQVSESAMILKRAGLRPDASSREIQNLLRMNGISMQGARDKTDLME---------------ILEGVLPEATPEEEAEV--ALMDPSLLQEREYKFSLASGTNKFFAGALGIANLGGVLYLGKLFSQYKLYGVNLPGFLGLAQTLY-------PGLVVYAILFNLIPVARNFWNRKKNAEIQGRNKARKKWRELARSKGSNVLRKLKAAAKFATNRKILKGDDSLYDTKESASSLQSKKDQMDLDAFDSLLNDDK 619
BLAST of mRNA_Ecto-sp13_S_contig10076.103.1 vs. uniprot
Match: A0A7S3DVR3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DVR3_9STRA) HSP 1 Score: 241 bits (615), Expect = 2.750e-72 Identity = 182/423 (43.03%), Postives = 231/423 (54.61%), Query Frame = 1 Query: 7 DRRRGGGGFDGGYGGRGLGFNTYFGPSPFDFFYYRPYYGYY---GTPVGRGGQRGDPEEMGILESIFSFIFGDGDPNADMEQRRVEAAAKLIRGNGGAVSAEQLAPLL----TPETLRSSDSSVVDESFVLPILTALDGAPEVTANGDIVYVFPSLQTSAMGTGTAATQIESKESARLAGL-KSLSTADLRIALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPRMSRGSSXXXXXXXRGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQARLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSG---DAVISRKLKAAKTMTTDMKVI--KPEDVEYTTAKTLADQGINQDDDLLDDFDTRLKS 1236 DRR GGGG G + N +FGPSP DFFYYRPY GYY GTP +R ++MG LESIFS+IFGDG+PNA++ ++R+ A LIR N G+V+AEQLAP TP ++ D + VDESFVLP++TAL+G P VT +GDIVYVFP LQTSA G A T + R AGL +S S D++ LE G+ + ER +LI A L P + P L E FSVA+ K AG LG VNLGGALYL + S A G LPG+YG VQ P LL YA+ NVIP VR KR+N KI RN +R+ W A S ++ + RKL AAK M T +K + P D+ + T +++ D + LDDFD L++ Sbjct: 2 DRRSGGGGMXXXXXGGNI--NYFFGPSPLDFFYYRPY-GYYXXXGTPQN---ERRQSDDMGFLESIFSYIFGDGNPNANLSEKRLALVANLIRQNQGSVTAEQLAPFCDATETPSAVQ--DKTYVDESFVLPVVTALNGEPRVTEDGDIVYVFPELQTSATGNALAPTTSSDGMTLRRAGLVESSSNRDIKRFLEYNGIATRGVLERGDLISILEKA-----------LPPMTEEEEAELLDSD------PTVLQEREYKFSVASDLNKVLAGGLGVVNLGGALYLGNMFSQLAPLG-RLPGWYGAVQTFY-------PALLGYAIFYNVIPLVRNFWIKRQNEKIRQRNKIRKDWKAALASSIRNNSAVQRKLAAAKRMGTKLKQVGASPNDIVFDTKQSIEDVKEIKGKSDLDDFDKLLEA 391
BLAST of mRNA_Ecto-sp13_S_contig10076.103.1 vs. uniprot
Match: A0A7S2XPT5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPT5_9STRA) HSP 1 Score: 246 bits (628), Expect = 6.150e-72 Identity = 172/404 (42.57%), Postives = 228/404 (56.44%), Query Frame = 1 Query: 61 GFNTYFGPSPFDFFYYRPYY-GYYGTPVGRGGQRGDPEEMGILESIFSFIFGDGDPNADMEQRRVEAAAKLIRGNGGAVSAEQLAPLLTPE---TLRSSDSSVVDESFVLPILTALDGAPEVTANGDIVYVFPSLQTSA-MGTGTAATQIESKESARL------AGLKS-LSTADLRIALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPRMSRGSSXXXXXXXRGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQARLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKPEDVE--YTTAKTLADQGINQDDDLLDDFDTRL 1230 GF ++GPSPFDFFYYRPYY GYY TP G DP+EMG LES+FS+IFGDG+PN D+E+RR+ A LIR N GAV+AEQLAP ++ D++ VDESFVLPI++ L+G P VT +GDIVYVFP LQ SA M +GT + ++ + S R AGL + S +D++ L + + F + +L+ GI + VL P P+ L E FS+A+G ++F +G LGAVNL GALYL + S A GV LP YYG VQ+ P LL YAV NVIP VR VL ++EN I RN +RR W A G I RKL++A+ M T ++ + D E + T T+ + ++ + DFD L Sbjct: 217 GFGGFWGPSPFDFFYYRPYYSGYYATP---GQAYRDPDEMGFLESVFSYIFGDGNPNGDLEERRLSLVANLIRENKGAVTAEQLAPFCDDAPAPSMSDDDATYVDESFVLPIVSKLNGEPRVTDDGDIVYVFPELQVSASMSSGTTVSALQQQRSLRTSLTLVRAGLDADASASDIKNLLNRNSINSRGAFTKEDLL------GILET-----VLPPMTDEDERRLTASTLTN--DPKLLQEREFEFSLASGTQRFLSGALGAVNLLGALYLGNMFSQFAAYGVQLPSYYGVVQSLY-------PALLGYAVLFNVIPVVRNVLLQKENDDIRKRNKIRRAWQTALDVGVGPIRRKLQSARKMGTKLQQLGGSDDETVFDTRSTMEEMDAEREQAKMKDFDKLL 597
BLAST of mRNA_Ecto-sp13_S_contig10076.103.1 vs. uniprot
Match: K0RAF7_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAF7_THAOC) HSP 1 Score: 245 bits (625), Expect = 4.730e-71 Identity = 171/415 (41.20%), Postives = 234/415 (56.39%), Query Frame = 1 Query: 58 LGFNTYFGPSPFDFFYYRPYYG--YYGTPVGRGGQRGDPEEMGILESIFSFIFGDGDPNADMEQRRVEAAAKLIRGNGGAVSAEQLAPLL--TPETLRSS-----DSSVVDESFVLPILTALDGAPEVTANGDIVYVFPSLQTSAMGTGTAATQIESKESARL---------AGL-KSLSTADLRIALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPRMSRGSSXXXXXXXRGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQARLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKP--EDVEYTTAKTLADQGINQDDDLLDDFDTRLKSS 1239 +GF ++GPSPFDFFYYRPYY Y GG+R DP+EMG LES+FS++FGDG+PN D+E+RR+ AA++IR NGGAV+AEQLAP + P L + + + VDE+FVLPI+T LDG P+VT +GDIVY FP L T++ GT++ + ++ AR+ AGL K ++ ++ L + RS+LID +A + D+G+ + V P L+E FS+A+G + AG LG VNLGGALYL LL A GV LP Y G VQ LLLG YAV N+IP R ++ENAKI+ RN R KW +G + RKL AA+ + MK + DV + T+K A+ ++ + LD FD +L+SS Sbjct: 266 MGFGGFWGPSPFDFFYYRPYYSRYXYSPAYDTGGRRRDPDEMGFLESVFSYVFGDGNPNGDVEERRLGLAAEMIRMNGGAVTAEQLAPFVDEAPAPLDADGRLGEERAYVDEAFVLPIVTQLDGEPQVTEDGDIVYTFPELMTTSTSKGTSS--VSREDMARIQREGRILQKAGLEKDAPSSTIKTLLTMNRISTRGALSRSDLID-ILADVLPGDDDGD-----------------SYQDVDDPTILVEREHKFSLASGLQTVLAGALGVVNLGGALYLGNLLGQYALYGVRLPSYMGLVQQFFPLLLG-------YAVLFNLIPLARNFWIQKENAKIQQRNETRLKWRNLLENGAGNVKRKLTAARKFGSKMKRLGTGSRDVIFDTSKDFAEVERVKESNDLDAFDEKLRSS 653
BLAST of mRNA_Ecto-sp13_S_contig10076.103.1 vs. uniprot
Match: A0A7S0V774_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V774_9CRYP) HSP 1 Score: 235 bits (600), Expect = 9.180e-71 Identity = 155/374 (41.44%), Postives = 211/374 (56.42%), Query Frame = 1 Query: 73 YFGPSPFDFFYYRPYYGYYGTPVGRGGQRGDPEEMGILESIFSFIFGDGDPNADMEQRRVEAAAKLIRGNGGAVSAEQLAPLLTPETLRS-SDSSVVDESFVLPILTALDGAPEVTANGDIVYVFPSLQTSAMGTGTAATQIESKESARLAGLKSLSTADLRIALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPRMSRGSSXXXXXXXRGVVIPEPLMEETK-PFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQARLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGI 1188 ++GPSPFDF +Y PY P G R DP E+ LES+FSF+FGDGDPN+D+E RR A A+++R NGGAV+AEQ+AP + P+ S S ++ DE F+LP + AL G PEVT +GDIVYVF LQ SA G G AA L +S +++ +A G+ M++R +L AAG++ L R +RG+S + P +EE + FS+A G ++FA LGA+NL GALYL LL+ P AG TL G GFVQ P L+ YA+A +P RF K +NA IE RN R WA A + + RKL AK ++T KVI +D++Y+T ++ DQ + Sbjct: 9 WWGPSPFDFLFYNPY-----QPYGVNRYR-DPSELSFLESVFSFLFGDGDPNSDLEDRRYRAIAQVVRDNGGAVTAEQIAPYMNPDRAYSGSGGAMPDEGFILPAIQALKGTPEVTEDGDIVYVFDELQESAGG-GAAA-------------LGGMSAREIKGLAQAEGISTAGMYDRDDL-----AAGVSA------ALAARGARGASS----------VRRPYLEEQEYQFSLATGGQQFAVAALGALNLVGALYLGNLLASPYIAGRTLVGLLGFVQT-------IYPALVAYALAFVAVPVARFFKVKADNAAIEARNRDRASWAYALQKAGGDVKRKLAGAKRLSTQTKVIGKDDIDYSTGESAVDQEL 334
BLAST of mRNA_Ecto-sp13_S_contig10076.103.1 vs. uniprot
Match: A0A7S2PD57_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PD57_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.640e-67 Identity = 163/403 (40.45%), Postives = 213/403 (52.85%), Query Frame = 1 Query: 58 LGFNTYFGPSPFDFFYYRPYYGYYGTPVGRGGQRGDPEEMGILESIFSFIFGDGDPNADMEQRRVEAAAKLIRGNGGAVSAEQLAPLL--TPETLRSSDS--SVVDESFVLPILTALDGAPEVTANGDIVYVFPSL-QTSAMGTGTAATQIESKESARL---AGL-KSLSTADLRIALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVLEPRMSRGSSXXXXXXXRGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQARLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKP--EDVEYTTAKTLADQGINQDDDLLDDFDTRLK 1233 +GF +FGPSPFDFFYYRPYY Y R DPE+MG LES+FS++FGDGDPN D+E+RR+ ++IR NGGAV+AEQLAP P L + + + VDESFVLPI+T LDG P+VT GDIVYVFP L +TS + E K +R+ AGL + T ++ L + ER +L+D +LE + +S V P LME FS+A+ + AG LG VNLGGALYL LL A GV LP Y G VQ P LL YAV N IP VR + R+N KI+ RN +RR W + RK+ AA M +K + D+ + T+K A+ ++ D + +FD L+ Sbjct: 74 MGFGGFFGPSPFDFFYYRPYYSRYXXSPTDSRSRRDPEDMGFLESVFSYVFGDGDPNGDVEERRLALVGEMIRQNGGAVTAEQLAPFCDDAPMPLDNGEEERAYVDESFVLPIVTQLDGEPQVTDEGDIVYVFPELMKTSTSKSVVPNLSAEEKRESRILRRAGLDEDAPTEVIKRLLMMNRISTRGALERGDLVD---------------ILEEVLPDDNSSDVD-----VDDPTLLMEREYKFSLASSIQTILAGGLGVVNLGGALYLGNLLGQYALYGVRLPSYMGLVQQFF-------PLLLAYAVLFNAIPLVRNIWVSRQNVKIQQRNEVRRSWKSLLEQKAGSVKRKMMAAARMGKKLKQLGAGGRDIVFDTSKDFAEIETVKEKDEMKEFDKLLE 449 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10076.103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10076.103.1 >prot_Ecto-sp13_S_contig10076.103.1 ID=prot_Ecto-sp13_S_contig10076.103.1|Name=mRNA_Ecto-sp13_S_contig10076.103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=416bp SRDRRRGGGGFDGGYGGRGLGFNTYFGPSPFDFFYYRPYYGYYGTPVGRGback to top mRNA from alignment at Ecto-sp13_S_contig10076:98..5730- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10076.103.1 ID=mRNA_Ecto-sp13_S_contig10076.103.1|Name=mRNA_Ecto-sp13_S_contig10076.103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5633bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10076:98..5730- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10076:98..5730- >mRNA_Ecto-sp13_S_contig10076.103.1 ID=mRNA_Ecto-sp13_S_contig10076.103.1|Name=mRNA_Ecto-sp13_S_contig10076.103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1248bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10076:98..5730- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |