mRNA_Ecto-sp13_S_contig10073.99.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10073.99.1 vs. uniprot
Match: D8LQ21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ21_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 2.180e-22 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 1 Query: 13 QELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQ 159 +ELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVS IEAVDLSPGMLSQ Sbjct: 62 EELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSGIEAVDLSPGMLSQ 110
BLAST of mRNA_Ecto-sp13_S_contig10073.99.1 vs. uniprot
Match: A0A6H5K3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H3_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.240e-16 Identity = 41/43 (95.35%), Postives = 41/43 (95.35%), Query Frame = 1 Query: 31 LLAGATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQ 159 L A ATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQ Sbjct: 305 LEASATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQ 347
BLAST of mRNA_Ecto-sp13_S_contig10073.99.1 vs. uniprot
Match: A0A836CG23_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG23_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 6.870e-11 Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 16 ELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQ 159 +LR + + A GRVLEV VGTGLNL +YRRD VS I+AVDLSP ML+Q Sbjct: 49 QLRQIMTSTARGRVLEVAVGTGLNLPYYRRDRVSQIDAVDLSPSMLAQ 96
BLAST of mRNA_Ecto-sp13_S_contig10073.99.1 vs. uniprot
Match: A0A7S2B2V6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2V6_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.570e-8 Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 1 Query: 19 LRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLS 156 LR+ L+ A+GRVLEVGVGTGLNL Y V+++E +DLS GMLS Sbjct: 1 LRAMLIGKASGRVLEVGVGTGLNLPFYDTTRVTSLEGIDLSDGMLS 46
BLAST of mRNA_Ecto-sp13_S_contig10073.99.1 vs. uniprot
Match: A0A1F7PWI2_9BACT (Methyltransf_11 domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_73_47 TaxID=1802111 RepID=A0A1F7PWI2_9BACT) HSP 1 Score: 56.6 bits (135), Expect = 2.970e-8 Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 1 Query: 22 RSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQV 162 R L AG GRVLEVG GTG NLRHY D +AI A DLSPGML ++ Sbjct: 39 RGPLFAGLKGRVLEVGAGTGKNLRHYGED--AAIVASDLSPGMLGRL 83
BLAST of mRNA_Ecto-sp13_S_contig10073.99.1 vs. uniprot
Match: Q47RZ4_THEFY (Phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase n=4 Tax=Thermobifida fusca TaxID=2021 RepID=Q47RZ4_THEFY) HSP 1 Score: 55.8 bits (133), Expect = 6.220e-8 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 13 QELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQ 159 ++ R +L A A+GRVL+V VGTG NL HY D V+ + +DLSPGMLSQ Sbjct: 40 KDTRQRLCAQASGRVLDVAVGTGRNLAHYSAD-VTEVVGIDLSPGMLSQ 87
BLAST of mRNA_Ecto-sp13_S_contig10073.99.1 vs. uniprot
Match: A0A6A0A1M2_HAELA (Methyltransf_11 domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0A1M2_HAELA) HSP 1 Score: 55.8 bits (133), Expect = 9.280e-8 Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 16 ELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQ 159 ELR+ LLA A+G VLEV VGTGLNL Y V ++ AVDLS GML+Q Sbjct: 146 ELRAXLLAQASGSVLEVAVGTGLNLPLYDWQQVKSVRAVDLSEGMLAQ 193
BLAST of mRNA_Ecto-sp13_S_contig10073.99.1 vs. uniprot
Match: A0A699ZZU6_HAELA (Methyltransf_11 domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZZU6_HAELA) HSP 1 Score: 55.8 bits (133), Expect = 1.040e-7 Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 16 ELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQ 159 ELR+ LLA A+G VLEV VGTGLNL Y V ++ AVDLS GML+Q Sbjct: 178 ELRASLLAQASGSVLEVAVGTGLNLPLYDWQQVKSVRAVDLSGGMLAQ 225
BLAST of mRNA_Ecto-sp13_S_contig10073.99.1 vs. uniprot
Match: A0A8J9WTP0_9CHLO (Probable ubiquinone/menaquinone biosynthesis C-methyltransferase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WTP0_9CHLO) HSP 1 Score: 54.3 bits (129), Expect = 2.680e-7 Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 1 Query: 7 FPQELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQ 159 FP ELR +L+A A G+VLE+ VGTGLNL Y D + ++ A+D+S GML Q Sbjct: 48 FP-ELRRELIAEAHGKVLELAVGTGLNLPLYHPDQLESLSALDISAGMLQQ 97
BLAST of mRNA_Ecto-sp13_S_contig10073.99.1 vs. uniprot
Match: A0A061R1H8_9CHLO (Methyltransferase type 11 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R1H8_9CHLO) HSP 1 Score: 53.9 bits (128), Expect = 4.950e-7 Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 1 Query: 16 ELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQ 159 ELR LL A+G VLEVGVGTG+NL Y + VS++ VDLS GML + Sbjct: 109 ELRRSLLRRASGNVLEVGVGTGINLPLYDKRKVSSVTGVDLSVGMLHE 156 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10073.99.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10073.99.1 >prot_Ecto-sp13_S_contig10073.99.1 ID=prot_Ecto-sp13_S_contig10073.99.1|Name=mRNA_Ecto-sp13_S_contig10073.99.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=55bp MYFPQELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMback to top mRNA from alignment at Ecto-sp13_S_contig10073:436..600- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10073.99.1 ID=mRNA_Ecto-sp13_S_contig10073.99.1|Name=mRNA_Ecto-sp13_S_contig10073.99.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10073:436..600- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10073:436..600- >mRNA_Ecto-sp13_S_contig10073.99.1 ID=mRNA_Ecto-sp13_S_contig10073.99.1|Name=mRNA_Ecto-sp13_S_contig10073.99.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10073:436..600- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |