mRNA_Ecto-sp13_S_contig10070.96.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10070.96.1 vs. uniprot
Match: D7FH75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH75_ECTSI) HSP 1 Score: 320 bits (821), Expect = 4.110e-110 Identity = 169/182 (92.86%), Postives = 174/182 (95.60%), Query Frame = 1 Query: 1 MVLDGDELLDLPIIGDRLRKSSAAAPSARGGSSKEQFVSPLVLPKLPSRLYVRFGEAITLEGLDKNDKEACQEAYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERVKGEAAPTFPASVLDAAVLRTRLAREGKRRRQRQRSVAPPTTEKPVESIVGVGTAAADKLADKVAAVAPEPSE 546 MVLDGDELLDLPIIGDRLRKSSAAAPSARGGSSKEQFVSPLVLPKLPSR+YVRFGEAITLEGLDK+DK+ACQ AYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERVKGEAAPTFPASVLDAAVLRTRLAREGKRRRQRQRSV P TEKPVES +GVGTAAADKLAD V AV PEP+E Sbjct: 1 MVLDGDELLDLPIIGDRLRKSSAAAPSARGGSSKEQFVSPLVLPKLPSRVYVRFGEAITLEGLDKSDKKACQGAYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERVKGEAAPTFPASVLDAAVLRTRLAREGKRRRQRQRSVTPVRTEKPVESTIGVGTAAADKLADNVTAVVPEPTE 182
BLAST of mRNA_Ecto-sp13_S_contig10070.96.1 vs. uniprot
Match: A0A1E7FBB4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBB4_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.030e-24 Identity = 57/119 (47.90%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 4 VLDGDELLDLPIIGDRLRKSSAAAPSARGGSSKEQ--FVSPLVLPKLPSRLYVRFGEAITLEGLDKNDKEACQEAYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERVKGEAAPTF 354 +LD DE+L+LPIIG R + S+ +AR S E V+PLV P LPSR Y FG+ + G+D DKE C+EAY ++DE+ LG +L+ARE D + D RL YE+V G APTF Sbjct: 509 LLDSDEVLNLPIIGQRAKDSARNVTAARFDVSNEDELMVAPLVTPSLPSRNYFIFGKPVYTHGIDPKDKELCKEAYLNIQDEMNLGFHQILKAREADTFKDGGPRLAYEKVTGRQAPTF 627
BLAST of mRNA_Ecto-sp13_S_contig10070.96.1 vs. uniprot
Match: A0A176WID5_MARPO (PlsC domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WID5_MARPO) HSP 1 Score: 102 bits (255), Expect = 4.350e-22 Identity = 58/124 (46.77%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 1 MVLDGDELLDLPIIGDRLRKSSAAAPSAR----GGSSKEQFVSPLVLPKLPSRLYVRFGEAITLEGL--DKNDKEACQEAYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERVKGEAAPTF 354 +VLD DELL +P +GD LRKS++A P+AR G + E FV PL PK+P R+Y F + IT EG+ ND++A + Y VKDEVE G+ L + R DPY + R+LYE APTF Sbjct: 766 IVLDQDELLGVPFLGDYLRKSASAFPAARMNATGEVANETFVFPLAYPKIPPRMYFLFQQPITTEGMIDSINDRDAMNDLYLKVKDEVESGLDYLQQKRNADPYKEFGPRVLYEATNDSQAPTF 889
BLAST of mRNA_Ecto-sp13_S_contig10070.96.1 vs. uniprot
Match: A0A7S2C8B9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C8B9_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 9.210e-19 Identity = 53/127 (41.73%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 1 MVLDGDELLDLPIIGDRLRKSSAAAPSARGG-------SSKEQFVSPLVLPKL--PSRLYVRFGEAITLEGLDKNDKEACQEAYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERVKGEAAPTF 354 ++LD ++L +PI+G+RLR S AA P AR G KE+ P+ LP L P R Y F G+D DKEAC AYE VK V+ I LL AR++D + + RL+YE++ G AP+F Sbjct: 530 ILLDSNDLDQIPILGERLRASQAAVPVARRGMGAAVPEEEKERMSIPVSLPSLSGPERFYFHFDTPYDTTGIDPRDKEACTTAYEAVKGGVQSSIAYLLEARKKDSFRPLSKRLIYEQITGSRAPSF 656
BLAST of mRNA_Ecto-sp13_S_contig10070.96.1 vs. uniprot
Match: K8E9I0_9CHLO (Hydrolase_4 domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8E9I0_9CHLO) HSP 1 Score: 93.2 bits (230), Expect = 9.370e-19 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 1 MVLDGDELLDLPIIGDRLRKSSAAAPSARGGSSKE--------QFVSPLVLPKLPSRLYVRFGEAITLEGLDKNDKEACQEAYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERVKGEAAPTF 354 +V+D +++L PI+GDR++ P AR S+E FV P+++P P R Y RF + I G+D+ND+EA + Y K VE GI+ L RE DP+ D R+LYE + APTF Sbjct: 612 IVMDAEDMLSNPILGDRVKAQMEKVPKARQFDSRETEDNMKPESFVQPVLVPTTPQRFYFRFMKPIDTNGMDRNDEEAVKRIYAETKMSVEDGIEYLKERRESDPFKDVAPRVLYESAAKKQAPTF 737
BLAST of mRNA_Ecto-sp13_S_contig10070.96.1 vs. uniprot
Match: A0A0K6S9U4_9ALVE (AB hydrolase-1 domain-containing protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S9U4_9ALVE) HSP 1 Score: 90.1 bits (222), Expect = 1.170e-17 Identity = 53/150 (35.33%), Postives = 76/150 (50.67%), Query Frame = 1 Query: 1 MVLDGDELLDLPIIGDRLRKSSAAAPSAR-----------GGSSK--------------EQFVSPLVLPKLPSRLYVRFGEAITLEGLDKNDKEACQEAYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERV--KGEAAPTFPASVL 369 ++LD +ELL +PI+GDRLR+++ P R GG S+ + V+P+ PK P R Y FG + +D N++E C AY ++ VE GI L ARE+DP+ + RL++ R K E PTFP S L Sbjct: 851 LLLDTEELLKVPILGDRLRENAMKLPKVREFAGAQGRAMEGGGSRMNSNGEIETEEDLDQMLVAPVGFPKPPDRFYFLFGRPLDCRQIDPNNREQCAAAYRDLRSTVETGIDELRNARERDPFRNVLARLVFSRAFPKAEGVPTFPLSRL 1000
BLAST of mRNA_Ecto-sp13_S_contig10070.96.1 vs. uniprot
Match: A0A1Y1HUH4_KLENI (Esterase/lipase/thioesterase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HUH4_KLENI) HSP 1 Score: 88.6 bits (218), Expect = 3.750e-17 Identity = 53/123 (43.09%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 MVLDGDELLDLPIIGDRLRKSSAAAPSARGGSSKEQFVSPLVLPKLPSRLYVRFGEAITLEGLDK----NDKEACQEAYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERV-KGEAAPTF 354 ++L DE+L LPIIGDR+RK + + P+ R G + E+F++PL PKLPSR Y FG+ I G+ + D+E ++ Y VK +++ I LL R +DPY D R LYE G+ APTF Sbjct: 590 LLLGPDEILKLPIIGDRVRKQAESIPNVRTGVA-ERFIAPLPAPKLPSRHYFLFGKPIVTRGMAEAGVGKDREQVKQLYSEVKAQLQGCIAYLLDKRAKDPYRDFIPRALYELTWGGKQAPTF 711
BLAST of mRNA_Ecto-sp13_S_contig10070.96.1 vs. uniprot
Match: A0A0G4ELF3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ELF3_VITBC) HSP 1 Score: 87.4 bits (215), Expect = 9.790e-17 Identity = 53/130 (40.77%), Postives = 75/130 (57.69%), Query Frame = 1 Query: 1 MVLDGDELLDLPIIGDRLRKSSAAAPSARGGSSKEQFVSPLVLPKLPS----RLYVRFGEAITLEGLDKNDKEACQEAYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERVKGEAAPTFPASVLDAA 378 +VLD E+L+LP +G+RL++ + A P A S FV P+ LP L + R Y+ FG + L G+D DKE+CQ YE ++ EVE G+Q+LL ARE+DP+ R YE AP+ + L A Sbjct: 739 IVLDKREVLNLPFVGERLKRRAQAFPRA---SDFPPFVPPIPLPSLRTGGGERPYLLFGRPMDLTGVDAADKESCQALYEQLRGEVESGVQTLLEAREKDPFRRGPRRWAYELRHRRKAPSVSSINLPQA 865
BLAST of mRNA_Ecto-sp13_S_contig10070.96.1 vs. uniprot
Match: A0A0M0K5E1_9EUKA (Hydrolase_4 domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K5E1_9EUKA) HSP 1 Score: 86.7 bits (213), Expect = 1.740e-16 Identity = 49/121 (40.50%), Postives = 70/121 (57.85%), Query Frame = 1 Query: 1 MVLDGDELLDLPIIGDRLRKSSAAAPSARGGSSKEQFVSPLVLPKLPSRLYVRFGEAITLEGLDKNDKEACQEAYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERVKGEA--APTFP 357 M+LD DELL LP++G R+ +S+A P R G E+FV+P+ +P++P R Y FG I G+D DK AC Y +V+ E+E + LL R+ DP+ R+ E A AP+FP Sbjct: 587 MLLDADELLSLPVLGQRVAQSAARTPVGRPG---ERFVAPVSVPRVPGRYYFLFGAPIETRGVDPTDKAACAALYASVRAELEGCVDYLLEKRKHDPWEAALPRVAVEASWDFAKQAPSFP 704
BLAST of mRNA_Ecto-sp13_S_contig10070.96.1 vs. uniprot
Match: A0A2K3DGW3_CHLRE (Hydrolase_4 domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DGW3_CHLRE) HSP 1 Score: 86.3 bits (212), Expect = 2.470e-16 Identity = 51/127 (40.16%), Postives = 71/127 (55.91%), Query Frame = 1 Query: 1 MVLDGDELLDLPIIGDRLRKSSAAAPSARGGSSKE-----QFVSPLVLPKLPSRLYVRFGEAITLEGLDKNDKEACQEAYETVKDEVELGIQSLLRAREQDPYLDPTTRLLYERVKG----EAAPTF 354 ++LD D++ + + +R R+ +AAAP AR G + E F+ PL+ P +PSR Y FG + D+ AC + Y VK +VE GI LLR REQDPY D TR++YE+ APTF Sbjct: 755 LLLDSDDIRNSLLWSERAREQAAAAPRARVGVAAEAGLDESFIPPLIAPAVPSRWYFLFGRPVATTPDMYRDRAACDKVYADVKRQVEEGIDYLLRKREQDPYRDFLTRMVYEQNPPFGPRRIAPTF 881 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10070.96.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10070.96.1 >prot_Ecto-sp13_S_contig10070.96.1 ID=prot_Ecto-sp13_S_contig10070.96.1|Name=mRNA_Ecto-sp13_S_contig10070.96.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp MVLDGDELLDLPIIGDRLRKSSAAAPSARGGSSKEQFVSPLVLPKLPSRLback to top mRNA from alignment at Ecto-sp13_S_contig10070:2188..3974+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10070.96.1 ID=mRNA_Ecto-sp13_S_contig10070.96.1|Name=mRNA_Ecto-sp13_S_contig10070.96.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1787bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10070:2188..3974+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10070:2188..3974+ >mRNA_Ecto-sp13_S_contig10070.96.1 ID=mRNA_Ecto-sp13_S_contig10070.96.1|Name=mRNA_Ecto-sp13_S_contig10070.96.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=549bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10070:2188..3974+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |