Homology
BLAST of mRNA_Ecto-sp13_S_contig10066.90.1 vs. uniprot
Match:
A0A7S3JSR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSR1_9STRA)
HSP 1 Score: 104 bits (260), Expect = 1.480e-22
Identity = 53/120 (44.17%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 46 VTDWDSTAMAAEYDTFDACTSHSTTE--GQFHTHGTPGCLMEQVMKLEGVSDQEHSPFLDWSFDGLPVYGPHGTDGVMMLAC----GVDGADYTYCLDACSGMEAEMSDVDEFKHRYYLM 387
+T ++++A+ E DTFD C HS +H H P CL+ Q+ G ++ HSP + W+ DG PVYGP G DG+MM C G +G D CLDAC G AE+SDVD F +RYY++
Sbjct: 11 MTSYETSAVFLEGDTFDECGCHSADSQVASYHCHIPPSCLLSQL----GQTESSHSPQIGWAADGFPVYGPRGPDGIMMQTCSTTGGQEGVDV--CLDACGGYYAELSDVDAFVYRYYVI 124
BLAST of mRNA_Ecto-sp13_S_contig10066.90.1 vs. uniprot
Match:
A0A6H5LAI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAI5_9PHAE)
HSP 1 Score: 103 bits (258), Expect = 1.840e-22
Identity = 48/56 (85.71%), Postives = 50/56 (89.29%), Query Frame = 1
Query: 1 LVDGVPMHSAFASTSVTDWDSTAMAAEYDTFDACTSHSTTEGQFHTHGTPGCLMEQ 168
LVDGVPM SAFA T VTDWDSTAMAAEY+TFDAC SHSTTEG +HTHGTPGC MEQ
Sbjct: 200 LVDGVPMCSAFAGTPVTDWDSTAMAAEYNTFDACASHSTTEGHYHTHGTPGCFMEQ 255
BLAST of mRNA_Ecto-sp13_S_contig10066.90.1 vs. uniprot
Match:
R1DZX8_EMIHU (EF-hand domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DZX8_EMIHU)
HSP 1 Score: 106 bits (265), Expect = 8.900e-22
Identity = 51/111 (45.95%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 61 STAMAAEYDTFDACTSHSTTEG---QFHTHGTPGCLMEQVMKLEGVSDQEHSPFLDWSFDGLPVYGPHGTDGVMMLACGVDGADYTYCLDACSGMEAEMSDVDEFKHRYYL 384
S A+ AE +TFD C HS+ Q+H H P CL+ Q+ + G +HSP + W +DG PVYGP G DGV M+ CG GA YCLDAC+G ++ +D FK+RYY+
Sbjct: 467 SNAVTAEGETFDRCGGHSSGSSAGFQYHYHIPPTCLLAQLGQYIG----QHSPQVGWMYDGFPVYGPFGPDGVQMIKCGQTGAHEVYCLDACNGYYSDDESIDVFKYRYYM 573
BLAST of mRNA_Ecto-sp13_S_contig10066.90.1 vs. uniprot
Match:
A0A7S3JW52_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW52_9STRA)
HSP 1 Score: 95.1 bits (235), Expect = 5.300e-18
Identity = 47/115 (40.87%), Postives = 70/115 (60.87%), Query Frame = 1
Query: 52 DWDSTAMAAEYDTFDACTSHS--TTEGQFHTHGTPGCLMEQVMKLEGVSDQEHSPFLDWSFDGLPVYGPHGTDGVMMLACGVDGADYTYCLDACSGMEAEMSDV-DEFKHRYYLM 387
D+ ++A AE +FD C H+ +T +H+H P CL++Q+ G +D EHSP + + FDG PVYGP G +G+MM +C AD YC+D C G + S + D + +RYY+M
Sbjct: 151 DYYNSAPYAEGYSFDMCNQHAALSTAASYHSHVPPSCLLDQL----GQTDNEHSPQIGFLFDGFPVYGPRGPNGIMMKSCTESTADSVYCVDKCGGFADDGSIINDGYVYRYYIM 261
BLAST of mRNA_Ecto-sp13_S_contig10066.90.1 vs. uniprot
Match:
A0A5C6FGF5_9BACT (Arylsulfotransferase (ASST) n=2 Tax=Rubripirellula tenax TaxID=2528015 RepID=A0A5C6FGF5_9BACT)
HSP 1 Score: 71.2 bits (173), Expect = 6.650e-10
Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 1
Query: 55 WDSTAMAAEYDTFDACTSHSTTEGQFHTHGTPGCLMEQVMKLEGVSDQEHSPFLDWSFDGLPVYGPHG 258
W+ A+ E +FDAC +H GQ+HTHG P CL+ ++ EHSP L WSFDG P+YG +G
Sbjct: 1108 WNRLAVVFEAVSFDACDAHPPATGQYHTHGVPTCLVNEL----DDDGSEHSPILGWSFDGFPIYGSYG 1171
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10066.90.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 5
0 1 Expect = 1.48e-22 / Id = 44.17 Expect = 1.84e-22 / Id = 85.71 Expect = 8.90e-22 / Id = 45.95 Expect = 5.30e-18 / Id = 40.87 Expect = 6.65e-10 / Id = 45.59 Sequence A0A7S3JSR1_9STRA A0A6H5LAI5_9PHAE R1DZX8_EMIHU A0A7S3JW52_9STRA A0A5C6FGF5_9BACT back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 124.4 Seed ortholog evalue 4.5e-26 Seed eggNOG ortholog 2880.D8LCJ5 Model size 959 Hectar predicted targeting category other localisation Exons 8 EggNOG free text desc. YHYH protein EggNOG OGs 2CZR0@1,2SBB2@2759 Cds size 456 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462504.6598547-UTR-Ecto-sp13_S_contig10066:1..241 1681462504.6598547-UTR-Ecto-sp13_S_contig10066:1..241 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig10066 2..241 - 1681462504.6708941-UTR-Ecto-sp13_S_contig10066:732..891 1681462504.6708941-UTR-Ecto-sp13_S_contig10066:732..891 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig10066 733..891 - 1681462504.6839607-UTR-Ecto-sp13_S_contig10066:1610..1696 1681462504.6839607-UTR-Ecto-sp13_S_contig10066:1610..1696 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig10066 1611..1696 - 1681462504.76957-UTR-Ecto-sp13_S_contig10066:5451..5469 1681462504.76957-UTR-Ecto-sp13_S_contig10066:5451..5469 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig10066 5452..5469 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462504.6970732-CDS-Ecto-sp13_S_contig10066:1696..1786 1681462504.6970732-CDS-Ecto-sp13_S_contig10066:1696..1786 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10066 1697..1786 - 1681462504.7087035-CDS-Ecto-sp13_S_contig10066:2907..3012 1681462504.7087035-CDS-Ecto-sp13_S_contig10066:2907..3012 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10066 2908..3012 - 1681462504.7216816-CDS-Ecto-sp13_S_contig10066:3897..3948 1681462504.7216816-CDS-Ecto-sp13_S_contig10066:3897..3948 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10066 3898..3948 - 1681462504.7328682-CDS-Ecto-sp13_S_contig10066:4256..4316 1681462504.7328682-CDS-Ecto-sp13_S_contig10066:4256..4316 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10066 4257..4316 - 1681462504.7444005-CDS-Ecto-sp13_S_contig10066:4602..4744 1681462504.7444005-CDS-Ecto-sp13_S_contig10066:4602..4744 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10066 4603..4744 - 1681462504.7568328-CDS-Ecto-sp13_S_contig10066:5443..5451 1681462504.7568328-CDS-Ecto-sp13_S_contig10066:5443..5451 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10066 5444..5451 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10066.90.1
>prot_Ecto-sp13_S_contig10066.90.1 ID=prot_Ecto-sp13_S_contig10066.90.1|Name=mRNA_Ecto-sp13_S_contig10066.90.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp
MHSAFASTSVTDWDSTAMAAEYDTFDACTSHSTTEGQFHTHGTPGCLMEQ back to top mRNA from alignment at Ecto-sp13_S_contig10066:2..5469-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10066.90.1 ID=mRNA_Ecto-sp13_S_contig10066.90.1|Name=mRNA_Ecto-sp13_S_contig10066.90.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5468bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10066:2..5469- (Ectocarpus species13 EcNAP12_S_4_19m)CTAGTCGACGGCGTTCCC ATGCACAG GTACAATGCTGATTTCCTGCTTCT
GGCTTCTTCGGTGTTTGCGTGTTTTTTTTCTTTACGGCAAGAAGTTTTTC
CTCGGTGCGCGTCCATTCTCGCGAAGTGCGTTTCGGGATGGATGGATGCA
CCATGGAGGAACGGATGTGTTTTGCCGTGTTAGAGTGGGTGAAAACGGGT
ATGGCCTCCCGATCCCCGAGGGAATGCGCACACATCGGTTGAGCCTGTCG
ATGCACTTCGAGCGGGACATTTATTGCCGTTCTTTCCGTCAAAAACGATG
CCCACACCACGCGCGTGGGATCCGCTCTACTCCGGATGGATCCCCCGGCG
TTGATTTTTTTAGTTGCACGTGCAGTGCCTCTCGGATATGGTTGCAACGA
GCAGTACCGTAGTACGACCGAAGATTTGGCGTCATCAGATAGCAGCTATG
CATAAATGTGATCGATGCCGCAGGGACCGAAGAATCAGTCGATTCCGATT
GCAGGCGTTCTTGCAAACAACCACACGAAAGCCTCGTCCAGTTGAGGCCG
ATGGACATCATCAGGTGTACACGGTGCGAACAACGCCTGAACAACTTCCT
GGAGACAGATCGCACTGCTGTAAGGTCTTGAAAACTTCGCATTGAATTGG
CACCACAACGAACCATCAGCTTCCCCCTTTTTCCCTCCTTGTCCCCGTTT
GCCATTTGCTGGAAAACGAAAGCAGCGCATTCGCGAGCACTTCGGTCACG
GACTGGGATTCCACGGCAATGGCCGCTGAGTACGACACCTTCGATGCCTG
CACTTCGCATTCGACTACGGAAGGCCAATTCCACACACACGGAACTCCGG
GTTGTCTCATGGAGCAG GTATGTAGGAGCCTGGAGCGTTTTTCGGACAGG
ACTGCTGTACGTTTTGAGCTTCATCCGTGGGTGCCATTTGCTGTACCCAC
CAAAACCAGTGGGCATCGGTTGATTGCGCGTAGATCGATCAACCGACTCG
TACCGCGTCTCGTTTCGATGCCGTTCGCGGTGTCCTCAGTGTGGTGGTGC
ACCCAACACGAGACATAATGTTCTTTGTGTGCTTTGGATCAGTGTGTCGG
GCTCCCCGAAGCTGCTGTTTGACGGTGCACTCGCCTGTGTATCCACCCTG
CAGGTCATGAAGCTCGAGGGGGTAAGCGACCAAGAGCACTCGCCGTTCCT
CGACTGGTCCTTT GTAAGTACAACCCTTTGCTCTGTACGCGCCGTCGATG
GTTAGCAACATGTTGACAGCGACTAATCTAGCGCCAACATGCATGTGCAA
TATTGGACGGTGTTGCGAAGCGGGAGGCCACGGGCTATATGTCGAGCGCA
TTGAGGGTCACCGGCCTGGTGTGTAGACTTTTCAATCGGCAATGCAAACC
TCAAAAACATTTAAAATGTCATGAGAATTGCCTGCATGAAACGCGGTTCA
TTCTTTGACAATACCGTTCGTTCTTCCTCCGATACCCATCTCTCTTTCTC
TCGGTGCTTGCGGCGCTGCAGGACGGCTTGCCGGTGTACGGTCCGCACGG
CACGGACGGTGTGATGATGTTG GTGAGATTGTCCACGCGTTGGCATTTGT
CTTGAAGCGCGTGCCGACCTGTTTCTCAATTGCTGCCCAAATATTTTCAA
GGAACATTTGTTGAGATGTACTGACTTGTAGCAAAGTGGATATGCTGCAT
CTTCACAATATGTACTTCCTTCTGTTCAGTGCGATTGCTTGGATGATATC
CCACGTTATTGGACGACGATGGGCTTGCTGTTGGACAGATTCTCGACGCT
TGTTACGTGGTTGGCCCAAGGGCTTGTAGTGTACCATCATCGGCAAACGT
TGTAAATTGAACGATTCTTCGTATCAATACGAGGCCTTGGCTACTGTGTA
GCTTGCTTCGTCACTTACCAGAAGAGTATAAATGTTCCGGCCCTAACTGG
GGGCGTAGCATTTCGGCATCCTCAATGCCAAGCGCTTCTGCTCACTGGTG
CAAAACCGGAAATCGTACACGAGCGCGCCATATATGCTCGATAGGAGCCC
ATCCGAAGCCGCAGGAACGTCTTGCGTTGAAGTATGTGTTCCCCCGGTGG
CCTTCTACTTGTGCACAGCAATTATGAACGTTGGGCACAACACCATGTCG
AAGACGTGCATCGAGAAACGTCCTTTGCACTGCTGTATTGTGGCATAGAC
AGACCGCAACGACAGCAGAATGCAGCGCAACACATGGTGATCCCCACCAG
GTGCTTGATGCTTCGACCACCAACTTCTGAATCGTTCTACGCAAACAGGT
CGGACGGGCGTGCCTTAGTAGCCCGAAATCAGCTCATCATATATTGGTGG
AATCCGACCTCTCTGGTGAAAGCTGTCTGTACCGAGTTGCAAGCGCTGGG
GCAAGCTTTTCTTTTTCGCGCTTTCCACAACATCCATTCTGACGAAAAAT
GACGCAGGCGTGTGGAGTGGACGGCGCAGACTACACTTATTGCCTGGACG
CCTGCAGTGGCATGGAGGCCGAGATGTCAGACGTGGACGAGTTCAAGCAC
CGGTACTACTTG GTAAGAGGGCGAAATTGCGATCCCGATATCGTCAATCT
TCCGCGATTTTATTCGCGATGCTCGGCGGTAGCGTGCATCCTACTACTGT
ACCTTGAAACCTGAACATACGTTGTAGTTCGCTCGCTTCTCGAACTGCGT
TTCGAATGTGGTGATCGGAAGGGCGCAACGGCGTTCTAACCTTGAACCTG
CGTTTTCTAAAAGAGCGAACTGCGTTCGTTACGTCGTCGTGACTTCTTAC
TCCCGACCACGCACATCCCACGGTTTGTTCTCTCGAACACCTCGATGAAA
AACGTGCAGACGTGCGGTTTCGACCAAGGATTCTTGCCTGGTGCCGTGAA
CTGCTTCCGTGGCTGTTGCCCGGACAGGGTCCAGTGCGTGCTGTTTGCTC
TGTTAAGGTGTGCAGCATATCCACTGTGCTAAGTGAGCGCTGACTTAGCA
TAGTGGATATGCTTTTCACCTGAACAAAAGTACAACCGGGGGTCGAATCC
CTCGTGGACCGCTCGAGACGCCTTCATTCCGGAAAAAGCCTGGGATAATC
CTGAAATGATGGTATTCCCGCATGTAAGTCGATGAACCGCATATCCACTA
TGCTAAGTCAGGTTGACGTAGTACAGTGGATATGCTGTACACCACAACAC
GCTCTACATTCGGTTGTCTTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTTAATCCCGCTTCACCATGCAGATGCA
CCGACTTCTCTCTAATCACGCTTCGCCGTGCAGATGCACCGAGGCAATGG
AAACGTGCGACGACGGCGCCGAGGATCGCTATACGGAGGCCTACGTCCCA
GAGACTGGCATGATCTTGACTGA ACAGTATGACACTGAATTCCTGGATTG
GGACGACAGGCTCTACATTACCACGACCACCATCATCAACTGCCAAGCCT
ACTACAACA GTGAGAAAACTCATATTTTGAAGTATGTGCAGTTGACGTCA
GCTGCTGTTGGACCAACCTGTTGTGTGTAACAGTACAACATTCGGATGTT
GCTCTAAGCACCCAAGAGAATCGGGGCAGGCGACGTTTGTTGGGTCTTGT
TTAGCAGTTGCGGGGCCTGTCGTGCTTAGCAGATGTTCTCCCAATAGTGT
TAGGATGAGGTGAGGGACGATCTAATGTCCACCCTCACGCTTGAGGCATG
AGGGGGCACGGAAGCCGGTATTCCCACGTAGCAACGAAGTCAACGGGCGT
GGTCCGGAAACGACCCGTGACACCGCAAAGTTTGTCATTTTCGCTCCCGC
CGGGAAACTTCATATTTACAGAAGTGCATGTCATCTACGCGCTCGCACTG
TGGTCGTGCTTTGGCCAACTCCCCAACTCTTCACCGGCAAGGAGGGCTCA
AAGCTTCCGCAACGTTCGGGCTTGCGCACCCATCGGCCCCTCTCACCTAA
CACTCAACGGGGACCACTTGTAGCAATTGCGTCTCGCTTCTTTCCCGCCA
CATCACAAATTGCCCCGACCCCTCCGTTTTTTCCGCGAAGCTTGCGCACC
CATCGGCCCCTCATACCTTGCACTTAACAAAGACCACTTGTTTATTTTCC
GCCGCACCACAATCCACGACAATCCCCCCCGCGATGCACGCGTCGGTTTC
ATCTCTCTCTTGCTGTCTTTCTGTGTAGATACCGAACGCGAGTCTTTGGT
CACGCCCACGACGGCGCCGAGGTCAGGCGAACCCAGCCGTGACAGCGGCT
ACACCTATCTTCCCGAGCCGAGCCCCTCGGCAGAACGTTCCTCGGTAATG
TTTTCGTCGGAAGCGCCTAGTTCAAGCCCCTCGCCAG GTATGGTGTCATT
GGTTGGCCTGCCGGGCCGTGCAGGCGACAGCCTTGGCGTTTAGCACTTTT
GCTAGCGTGCCATGCCGGCCCTTTGAATGATCATGATCCACCCAAGCCTC
ACAAGTTCTTGAAAATTTTCTAGCATTTAGGGTCGTGTTTGTGTGCGTTG
TGTTCAAGATGCCGCGGGTAACGTTGTATGTAGTCAACGAATCCGGCGCC
GCATGCCGTTGAGGGTTTTGGCCGTGCTTCGCGTGGCGGCCGCAGCAGAT
CCCTGAAAGGTGCTTGACATCCAAGGGTACTTTCTAAATTGATGGCGTCT
CATAGGCGGCTTTCTGGCTTGTCAAGCCGCCCTGGACCTTCTCCTGCCCA
GTTCACGTTGTCCACTGTCCATGACGCCCGCCGATTCTAAACCCCAACGT
TGCCGACATTGTAGTCATTGCTGAGAGATGGTTTCCGTGTTTTGGTTGCA
CACCTTGCTTGCTTTTTCTCGTGACCAGCCCCTGTGGGAGCTGACACATC
GTCGACTCCTTGAAGAGGGGCACCGTGACAACGTCTACCCTCTATGTGGT
ACTTGGAGTTGCGCTACTCGTTATGAGCGAATGGCTTCCTTGGAAACGGG
ATGCCTTCGCAGCCATCCCGGCAGCACATGGACGTAGAGACCGATGCCCC
TCGTTGTGAAAGTCGATCGTCTTGTGCTCTACGGCCTGACTGACTTGTGA
GTTTAGCCTACTTGCAAG back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10066:2..5469-
>mRNA_Ecto-sp13_S_contig10066.90.1 ID=mRNA_Ecto-sp13_S_contig10066.90.1|Name=mRNA_Ecto-sp13_S_contig10066.90.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=456bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10066:2..5469- (Ectocarpus species13 EcNAP12_S_4_19m) back to top