mRNA_Ecto-sp13_S_contig100566.77.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig100566.77.1 vs. uniprot
Match: A0A7Z1IMR9_9GAMM (Uncharacterized protein n=2 Tax=Marinobacter TaxID=2742 RepID=A0A7Z1IMR9_9GAMM) HSP 1 Score: 140 bits (353), Expect = 6.530e-42 Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 1 Query: 1 MKQIYKITYPTGKIYIGKDSIGSYRYYGSPDMHVVNEDFAKLPESVRRDYTIRKQILWESEDCSEAELSAKE 216 MKQIYKITYPTGKIYIGKDSIGSYRYYGSPDM VVNEDFA LP+SVR+DYTIRKQILWESEDCSE+ELSAKE Sbjct: 1 MKQIYKITYPTGKIYIGKDSIGSYRYYGSPDMQVVNEDFASLPKSVRQDYTIRKQILWESEDCSESELSAKE 72
BLAST of mRNA_Ecto-sp13_S_contig100566.77.1 vs. uniprot
Match: A0A497EGU4_9BACT (GIY-YIG nuclease family protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A497EGU4_9BACT) HSP 1 Score: 125 bits (315), Expect = 3.830e-36 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 1 Query: 1 MKQIYKITYPTGKIYIGKDSIGSYRYYGSPDMHVVNEDFAKLPESVRRDYTIRKQILWESEDCSEAELSAKE 216 MKQIY ITYPTGKIYIGKDS+GSYRYYGSPDM +VNEDF LP+ VR+DYTIRKQILWESE +E ELSAKE Sbjct: 1 MKQIYMITYPTGKIYIGKDSVGSYRYYGSPDMAIVNEDFKSLPDDVRKDYTIRKQILWESETATEEELSAKE 72
BLAST of mRNA_Ecto-sp13_S_contig100566.77.1 vs. uniprot
Match: A0A5S5MC45_9DELT (GIY-YIG nuclease family protein n=1 Tax=Desulfobotulus mexicanus TaxID=2586642 RepID=A0A5S5MC45_9DELT) HSP 1 Score: 125 bits (314), Expect = 5.610e-36 Identity = 59/73 (80.82%), Postives = 67/73 (91.78%), Query Frame = 1 Query: 1 MKQIYKITY-PTGKIYIGKDSIGSYRYYGSPDMHVVNEDFAKLPESVRRDYTIRKQILWESEDCSEAELSAKE 216 MKQIYKITY PTGKIYIGKDS+GS+RY+GSPDM VN+DFAKLP+ VR+DYTIRKQILWES DC E+ELS+KE Sbjct: 1 MKQIYKITYHPTGKIYIGKDSVGSHRYFGSPDMETVNDDFAKLPDDVRKDYTIRKQILWESPDCEESELSSKE 73
BLAST of mRNA_Ecto-sp13_S_contig100566.77.1 vs. uniprot
Match: UPI0018DDFB8D (GIY-YIG nuclease family protein n=1 Tax=Algiphilus aromaticivorans TaxID=382454 RepID=UPI0018DDFB8D) HSP 1 Score: 125 bits (313), Expect = 1.630e-35 Identity = 56/72 (77.78%), Postives = 67/72 (93.06%), Query Frame = 1 Query: 1 MKQIYKITYPTGKIYIGKDSIGSYRYYGSPDMHVVNEDFAKLPESVRRDYTIRKQILWESEDCSEAELSAKE 216 MKQ+YKITYPTGKIYIGKDSIGS+RY+GSPDM++VNEDF L E R+DYT+RK+ILWES+DCSE+EL+AKE Sbjct: 1 MKQVYKITYPTGKIYIGKDSIGSHRYFGSPDMNLVNEDFESLSEEERKDYTVRKEILWESDDCSESELAAKE 72
BLAST of mRNA_Ecto-sp13_S_contig100566.77.1 vs. uniprot
Match: UPI001C601DAC (hypothetical protein n=1 Tax=Marinobacter adhaerens TaxID=1033846 RepID=UPI001C601DAC) HSP 1 Score: 124 bits (310), Expect = 2.090e-35 Identity = 57/72 (79.17%), Postives = 65/72 (90.28%), Query Frame = 1 Query: 1 MKQIYKITYPTGKIYIGKDSIGSYRYYGSPDMHVVNEDFAKLPESVRRDYTIRKQILWESEDCSEAELSAKE 216 MKQIYK+TYPTGKIYIGKDSIGS RY+GSP+M +VN DFA LPE+ ++DYT+RKQILWES CSEAELSAKE Sbjct: 1 MKQIYKVTYPTGKIYIGKDSIGSCRYFGSPNMDIVNADFASLPEATQKDYTVRKQILWESASCSEAELSAKE 72
BLAST of mRNA_Ecto-sp13_S_contig100566.77.1 vs. uniprot
Match: F9UIC2_9GAMM (Uncharacterized protein n=1 Tax=Thiocapsa marina 5811 TaxID=768671 RepID=F9UIC2_9GAMM) HSP 1 Score: 123 bits (308), Expect = 4.220e-35 Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 1 Query: 1 MKQIYKITYPTGKIYIGKDSIGSYRYYGSPDMHVVNEDFAKLPESVRRDYTIRKQILWESEDCSEAELSAKE 216 MKQ+Y I YPTGKIY+GKDS+GSYRYYGSPDM VN DFAKLP +R DYTIRKQILWES D SEAEL+AKE Sbjct: 1 MKQVYLIAYPTGKIYVGKDSVGSYRYYGSPDMETVNADFAKLPIEIRHDYTIRKQILWESADASEAELAAKE 72
BLAST of mRNA_Ecto-sp13_S_contig100566.77.1 vs. uniprot
Match: A0A396U3D2_9GAMM (GIY-YIG nuclease family protein n=2 Tax=Colwellia sp. RSH04 TaxID=2305464 RepID=A0A396U3D2_9GAMM) HSP 1 Score: 123 bits (308), Expect = 4.610e-35 Identity = 58/73 (79.45%), Postives = 64/73 (87.67%), Query Frame = 1 Query: 1 MKQIYKITY-PTGKIYIGKDSIGSYRYYGSPDMHVVNEDFAKLPESVRRDYTIRKQILWESEDCSEAELSAKE 216 MKQIYKITY PTGKIYIGKDS+GSYRYYGSPDM VN DF KLP+ +R+DYTIRK+ILWES DC E+ELS KE Sbjct: 1 MKQIYKITYHPTGKIYIGKDSVGSYRYYGSPDMDTVNADFLKLPDEIRKDYTIRKEILWESPDCEESELSKKE 73
BLAST of mRNA_Ecto-sp13_S_contig100566.77.1 vs. uniprot
Match: UPI0007C21C25 (hypothetical protein n=1 Tax=unclassified Oleiphilus TaxID=2631174 RepID=UPI0007C21C25) HSP 1 Score: 121 bits (304), Expect = 1.480e-34 Identity = 58/73 (79.45%), Postives = 65/73 (89.04%), Query Frame = 1 Query: 1 MKQIYKITY-PTGKIYIGKDSIGSYRYYGSPDMHVVNEDFAKLPESVRRDYTIRKQILWESEDCSEAELSAKE 216 MKQIYKITY PTGKIYIGKDSIGS+RY+GSPDM VN DFA LP+ VR+DYT+RKQILWES DC E+EL+AKE Sbjct: 1 MKQIYKITYNPTGKIYIGKDSIGSHRYFGSPDMDTVNADFATLPQEVRKDYTVRKQILWESPDCEESELAAKE 73
BLAST of mRNA_Ecto-sp13_S_contig100566.77.1 vs. uniprot
Match: A0A560LAH0_9SYNE (Uncharacterized protein n=1 Tax=Synechococcus sp. Ace-Pa TaxID=2572902 RepID=A0A560LAH0_9SYNE) HSP 1 Score: 118 bits (296), Expect = 3.020e-33 Identity = 54/72 (75.00%), Postives = 64/72 (88.89%), Query Frame = 1 Query: 1 MKQIYKITYPTGKIYIGKDSIGSYRYYGSPDMHVVNEDFAKLPESVRRDYTIRKQILWESEDCSEAELSAKE 216 MKQ+YKITYPTGKIYIGKDS+GS RY GSPDM++VN DF LP+ +RRDYT+RK+ILWES+ +EAELSAKE Sbjct: 1 MKQVYKITYPTGKIYIGKDSVGSARYMGSPDMNLVNADFETLPDHIRRDYTLRKEILWESDSATEAELSAKE 72
BLAST of mRNA_Ecto-sp13_S_contig100566.77.1 vs. uniprot
Match: UPI00035E53D3 (hypothetical protein n=1 Tax=Kangiella aquimarina TaxID=261965 RepID=UPI00035E53D3) HSP 1 Score: 118 bits (295), Expect = 4.050e-33 Identity = 51/72 (70.83%), Postives = 63/72 (87.50%), Query Frame = 1 Query: 1 MKQIYKITYPTGKIYIGKDSIGSYRYYGSPDMHVVNEDFAKLPESVRRDYTIRKQILWESEDCSEAELSAKE 216 MKQIYKITYPTGKIYIGKD++GSYRY+G+P + VVNEDF LP+ +++DYT+RK+ILWES +CS ELS KE Sbjct: 1 MKQIYKITYPTGKIYIGKDTVGSYRYFGNPSIEVVNEDFKNLPDDIKKDYTVRKEILWESTECSNEELSQKE 72 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100566.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig100566.77.1 >prot_Ecto-sp13_S_contig100566.77.1 ID=prot_Ecto-sp13_S_contig100566.77.1|Name=mRNA_Ecto-sp13_S_contig100566.77.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=72bp MKQIYKITYPTGKIYIGKDSIGSYRYYGSPDMHVVNEDFAKLPESVRRDYback to top mRNA from alignment at Ecto-sp13_S_contig100566:1..216- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig100566.77.1 ID=mRNA_Ecto-sp13_S_contig100566.77.1|Name=mRNA_Ecto-sp13_S_contig100566.77.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=216bp|location=Sequence derived from alignment at Ecto-sp13_S_contig100566:1..216- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig100566:1..216- >mRNA_Ecto-sp13_S_contig100566.77.1 ID=mRNA_Ecto-sp13_S_contig100566.77.1|Name=mRNA_Ecto-sp13_S_contig100566.77.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=216bp|location=Sequence derived from alignment at Ecto-sp13_S_contig100566:1..216- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |