mRNA_Ecto-sp13_S_contig100462.70.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig100462.70.1 vs. uniprot
Match: A0A6H5JH56_9PHAE (Pyr_redox_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH56_9PHAE) HSP 1 Score: 113 bits (283), Expect = 4.930e-28 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 1 Query: 1 AIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEVGRRCW 159 AIGNCFERANLPTVTEEQR+AALTFAIVGAGPTGVECCAELRDFIEEVGRRCW Sbjct: 271 AIGNCFERANLPTVTEEQRIAALTFAIVGAGPTGVECCAELRDFIEEVGRRCW 323
BLAST of mRNA_Ecto-sp13_S_contig100462.70.1 vs. uniprot
Match: A0A6S8C9L8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8C9L8_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 6.390e-16 Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 1 Query: 4 IGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEVGRR 153 +GNCFERANLPT T+E R AL+F IVGAGPTGVE C+ELRDF++E R Sbjct: 251 VGNCFERANLPTATDEDRTTALSFVIVGAGPTGVEFCSELRDFLQEEASR 300
BLAST of mRNA_Ecto-sp13_S_contig100462.70.1 vs. uniprot
Match: A0A835YV14_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV14_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 3.040e-15 Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = 1 Query: 1 AIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEE 141 AIGNCFERANLPT+++EQ+ A LTF +VG GPTGVE AELRDFIE+ Sbjct: 271 AIGNCFERANLPTLSDEQKQAVLTFVVVGGGPTGVELTAELRDFIEQ 317
BLAST of mRNA_Ecto-sp13_S_contig100462.70.1 vs. uniprot
Match: A0A7S0H9Y9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H9Y9_9CRYP) HSP 1 Score: 75.9 bits (185), Expect = 1.060e-14 Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 1 Query: 1 AIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEE 141 AIGN FERANLP +TEE+R+ LTF IVGAGPTGVE AEL+DFIEE Sbjct: 336 AIGNTFERANLPDMTEEERIRTLTFVIVGAGPTGVELTAELKDFIEE 382
BLAST of mRNA_Ecto-sp13_S_contig100462.70.1 vs. uniprot
Match: A0A7S4NPS0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NPS0_GUITH) HSP 1 Score: 75.9 bits (185), Expect = 1.060e-14 Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 1 Query: 1 AIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEE 141 AIGN FERANLP +TEE+R+ LTF IVGAGPTGVE AEL+DFIEE Sbjct: 348 AIGNTFERANLPDMTEEERIRTLTFVIVGAGPTGVELTAELKDFIEE 394
BLAST of mRNA_Ecto-sp13_S_contig100462.70.1 vs. uniprot
Match: A0A0G4FMA0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FMA0_9ALVE) HSP 1 Score: 75.1 bits (183), Expect = 1.980e-14 Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 1 Query: 1 AIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEVGRR 153 AIGNCFE+ANLP ++EEQR LTF IVGAGPTGVE ELRDF+E+ G R Sbjct: 317 AIGNCFEKANLPGLSEEQRRNLLTFVIVGAGPTGVELTGELRDFVEKEGPR 367
BLAST of mRNA_Ecto-sp13_S_contig100462.70.1 vs. uniprot
Match: A0A1E7FVG3_9STRA (Pyr_redox_2 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVG3_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.700e-14 Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 1 Query: 1 AIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEVG 147 AI NCFERANLP +++E+R+ LTFA++GAGPTG+E AELRDF+EE G Sbjct: 200 AIVNCFERANLPGLSDEERINILTFAVIGAGPTGIEFAAELRDFVEEDG 248
BLAST of mRNA_Ecto-sp13_S_contig100462.70.1 vs. uniprot
Match: A0A7S2WJC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WJC1_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 3.700e-14 Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 1 Query: 1 AIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEVG 147 A+ NCFERANLP +T+E+R A LTFA++GAGPTGVE +ELRDF+E+ G Sbjct: 291 ALVNCFERANLPNLTDEKREAILTFAVIGAGPTGVEFASELRDFVEQDG 339
BLAST of mRNA_Ecto-sp13_S_contig100462.70.1 vs. uniprot
Match: A0A448YXW6_9STRA (Pyr_redox_2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXW6_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 5.050e-14 Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 1 Query: 1 AIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEVG 147 AI NCFERANLP ++EE R+ LTFAI+GAGPTG+E AELRDF+E+ G Sbjct: 262 AIVNCFERANLPGLSEEDRINNLTFAIIGAGPTGIEFAAELRDFVEQDG 310
BLAST of mRNA_Ecto-sp13_S_contig100462.70.1 vs. uniprot
Match: A0A1Z5JW51_FISSO (NADH dehydrogenase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JW51_FISSO) HSP 1 Score: 73.6 bits (179), Expect = 6.900e-14 Identity = 33/56 (58.93%), Postives = 45/56 (80.36%), Query Frame = 1 Query: 1 AIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEVGRRCWYRV 168 +I NCFERANLP +T+E+R LTFA++GAGPTG+E AELRDF+E+ G + + R+ Sbjct: 309 SIVNCFERANLPGLTDEEREQNLTFAVIGAGPTGIEFAAELRDFVEQDGPKYYPRL 364 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100462.70.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig100462.70.1 >prot_Ecto-sp13_S_contig100462.70.1 ID=prot_Ecto-sp13_S_contig100462.70.1|Name=mRNA_Ecto-sp13_S_contig100462.70.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp AIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEVGRback to top mRNA from alignment at Ecto-sp13_S_contig100462:2..169- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig100462.70.1 ID=mRNA_Ecto-sp13_S_contig100462.70.1|Name=mRNA_Ecto-sp13_S_contig100462.70.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=168bp|location=Sequence derived from alignment at Ecto-sp13_S_contig100462:2..169- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig100462:2..169- >mRNA_Ecto-sp13_S_contig100462.70.1 ID=mRNA_Ecto-sp13_S_contig100462.70.1|Name=mRNA_Ecto-sp13_S_contig100462.70.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=168bp|location=Sequence derived from alignment at Ecto-sp13_S_contig100462:2..169- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |