mRNA_Ecto-sp13_S_contig10044.67.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10044.67.1 vs. uniprot
Match: A0A6H5KL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL88_9PHAE) HSP 1 Score: 756 bits (1951), Expect = 1.840e-273 Identity = 381/412 (92.48%), Postives = 390/412 (94.66%), Query Frame = 2 Query: 68 MPIANHDTEPEGDGEGSSDSLDDLFSEIWERESQPELRFAIIGVGSVVQTQDLQGHRWEVNNFSNTVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLTLLGAQVTMTDLPEALPILRHNTDATFATLNDNEGHGDNNNDRNSLVGRENHDHAADRRSCSRPTIRELCWGNVAEAGEVAAAVAAVDGEGSEWEGFDLIVGADVIYNEPTFPALLSTLSDRRLCSENTLVYLATMLRGGRHEGFLEMLNLNGFRVRALDPTCADDLRARVSGDDTKGSRSCGSRIGGGSPTTVTGDVAGGAAVVAAGGTGGRGGKWPGPEWKRGSLPPERRKIHLDTPTDSEKATRRDRRGGRETAADSPANGTGKVLTEDVAGGGIGHLVAPGARKGSRRGNDDSVFSAKRG 1303 MP+ANHDTEPE +GEGSSDSL DLFSEIWERESQPELRFAIIGVGSVVQTQDLQG RW+VNNFSNTVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTL LLGAQVTMTDLPEALPILRHNTDATFATLND+EGHGD NNDRN LVGRENHDHAADR SCSRP IRELCWGNVAEAGEVAAA AAVDGEGSEWEGFD+IVGADVIYNEPTFPALLSTLSDRRLCSEN+LVYLATMLRGGRHEGFLEMLNLNGF VRALDPTCADDLRARVSGDD KG+RSCGSRIGGGSP TV GDVAGGAAVVAAGGTGGRGGKWPGPEWKRGSLPPERRKIHLDTPTDSE A RR RRGGR TAADSPANGTG+ L EDVAGGGIGHLVAPGA +GS RGNDDS FSAKRG Sbjct: 1 MPMANHDTEPEVNGEGSSDSLGDLFSEIWERESQPELRFAIIGVGSVVQTQDLQGQRWKVNNFSNTVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLALLGAQVTMTDLPEALPILRHNTDATFATLNDDEGHGDENNDRNGLVGRENHDHAADRMSCSRPMIRELCWGNVAEAGEVAAAAAAVDGEGSEWEGFDMIVGADVIYNEPTFPALLSTLSDRRLCSENSLVYLATMLRGGRHEGFLEMLNLNGFHVRALDPTCADDLRARVSGDDAKGNRSCGSRIGGGSPATVAGDVAGGAAVVAAGGTGGRGGKWPGPEWKRGSLPPERRKIHLDTPTDSETAARRGRRGGRGTAADSPANGTGEALAEDVAGGGIGHLVAPGALRGSTRGNDDSAFSAKRG 412
BLAST of mRNA_Ecto-sp13_S_contig10044.67.1 vs. uniprot
Match: D8LFB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB7_ECTSI) HSP 1 Score: 693 bits (1789), Expect = 1.190e-248 Identity = 363/458 (79.26%), Postives = 373/458 (81.44%), Query Frame = 2 Query: 68 MPIANHDTEPEGDGEGSSDSLDDLFSEIWERESQPELRFAIIGVGSVVQTQDLQGHRWEVNNFSNTVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLTLLGAQVTMTDLPEALPILRHNTDATFATLNDNEGHGDNNNDRNSLVGRENHDHAADRRSCSRPTIRELCWGNVAEAGEVAAAVAAVDGEGSEWEGFDLIVGADVIYNEPTFPALLSTLSDRRLCSENTLVYLATMLRGGRHEGFLEMLNLNGFRVRALDPTCADDLRARVSGDDTKGSRSCGSRIGGGSPTTVTGDVAGGAAVVAAGGTGGRGGKWPGPEWKRGSLPPERRKIHLDTPTDSEKATRRDRRGGRETAADSPANGTGKVLTEDVAGGGIGHLVAPGARKGSRRGNDDSVFSAKRGVVGGXXXXXXWGYKESGLGKILAFAVRRRDSFDGDYDDDRGVGGGS 1441 MP+ NHDTEPE DGEGSSDSLDDLFSEIWERESQPELRFAIIGVGSVVQTQDLQGHRWEVNNFSNTVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTL LLGAQVTMTDLPEALPILRHNTDATFATLND+EG GD+NNDRN L+GR+NHDHAADR SCSRPTI+ELCWGN AEAGEVAAA AAVDGEGSEWEGFDLIV RGGRHEGFLEMLNLNGF VRALDPTCADDLRARVSGDD +GSRSC SRIGGGS TTV GD TGGR GKWPGPEWKRGSLP ERRKIHLDT T SE A RR R GGR+TAADSPANGTG+ L EDVA GGIGHL+APG RKGSRRGND S SAKR VVGG WGYKESGLGKILAFAVRRRDS DGD DDDRGVGGGS Sbjct: 1 MPMTNHDTEPEDDGEGSSDSLDDLFSEIWERESQPELRFAIIGVGSVVQTQDLQGHRWEVNNFSNTVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLALLGAQVTMTDLPEALPILRHNTDATFATLNDDEGDGDHNNDRNGLLGRKNHDHAADRESCSRPTIQELCWGNAAEAGEVAAAAAAVDGEGSEWEGFDLIV------------------------------------RGGRHEGFLEMLNLNGFHVRALDPTCADDLRARVSGDDAEGSRSCASRIGGGSATTVAGDXXXXXXXXXXXXTGGRSGKWPGPEWKRGSLPLERRKIHLDTQTHSETAARRGRGGGRKTAADSPANGTGEELAEDVADGGIGHLIAPGPRKGSRRGNDGSAISAKRAVVGGGGVGRGWGYKESGLGKILAFAVRRRDSVDGDDDDDRGVGGGS 422
BLAST of mRNA_Ecto-sp13_S_contig10044.67.1 vs. uniprot
Match: A0A7S3YA45_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA45_HETAK) HSP 1 Score: 139 bits (350), Expect = 6.650e-34 Identity = 91/244 (37.30%), Postives = 130/244 (53.28%), Query Frame = 2 Query: 86 DTEPEGDGEGSSDSLDDLFSEIWERESQPELRFAIIGVGSVVQTQDLQGHRWEVNNFSNTVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLTLLGAQVTMTDLPEALPILRHNTDATFATLNDNEGHGDNNNDRNSLVGRENHDHAADRRSCSR----PTIRELCWGNVAEAGEVAAAVAAVDGEGSEWEGFDLIVGADVIYNEPTFPALLSTLSDRRLCSENTLVYLATMLR 805 D+ E DGE + + D F+E+W RESQ EL F + V QD+ G ++ + +NTVWEA +++ +FQ++ FPPG+ G+ VLE+G+GTG+VG+TL LLGA+VT+TDL EALPILR N + F G + +H D + P + EL WG E + V G W D+++GAD+IYN F AL S+L SE T+ Y ++R Sbjct: 26 DSGDEDDGEDEEEEVVDWFAELWPRESQRELVFPVDSFKLTV-LQDVNGETFKTS-LANTVWEAGWFLNRYFQEKSLFPPGYFVGKSVLELGSGTGVVGMTLALLGAEVTLTDLAEALPILRANVEFNFGEK-----------------GPRSSEHEGDSYAAPSGITVPEVEELAWG------EPLSDVIT----GQHW---DIVIGADIIYNPTHFEALASSLEHIMSNSEGTMGYFCHLVR 237
BLAST of mRNA_Ecto-sp13_S_contig10044.67.1 vs. uniprot
Match: W7TVD0_9STRA (Nicotinamide N-methyltransferase, putative n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVD0_9STRA) HSP 1 Score: 125 bits (313), Expect = 9.050e-29 Identity = 95/310 (30.65%), Postives = 141/310 (45.48%), Query Frame = 2 Query: 50 LAQLWSMPIANHDTEPEGDGEGSSDSLDDLFSEIWERESQPELRFAI-IGVGSVVQT---QDLQGHRWEVNNFSNTVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLTLLGAQVTMTDLPEALPILRHNTDATFATLNDNEGHGDNNNDRNSLVGRENHDHAADRRSCSRPTIRELCWGNVAEAGEVAAAVAAVDGEGSEWEGFDLIVGADVIYNEPTFPALLSTLSD---------------------------------RRLCSENTLVYLATMLRGGRHEGFLEMLNLNGFRVRAL 868 ++ L ++P A + EGD E ++ +L E+W RE++P L + + G V QDL G R+E+ N VW+AA+ MHHFFQ E FPPG +G RVLE+G+GTGLVG+TLTLLGAQV +TDLP LP+LR+N + ++L+ + D A P I L WG + +D ++G+D+ Y + LL+TL++ + + +T+VY+ + RG H F E L G V + Sbjct: 1 MSSLPTIPSATNLVTSEGD-ENENEEEGNLLEELWPRETKPLLNYQVSFSNGCTVNVPIVQDLMGRRYEMG-IGNIVWDAAVAMHHFFQKE--FPPGHFQGARVLELGSGTGLVGITLTLLGAQVVLTDLPVFLPLLRNNVTTSLSSLSAS-------------------DTACLPHPILPPLIEPLTWGQSLPL--------------TSRRPYDYVIGSDITYCKEHLDDLLATLTEPVPPSLPXXXXXXXSTGDTLDPSAPSSSSLPPCKGVVGPDTVVYIGHLERGDEH-AFFERLRQRGMEVEEV 272
BLAST of mRNA_Ecto-sp13_S_contig10044.67.1 vs. uniprot
Match: A0A7K9UYE9_ANSSE (EFMT3 methyltransferase (Fragment) n=1 Tax=Anseranas semipalmata TaxID=8851 RepID=A0A7K9UYE9_ANSSE) HSP 1 Score: 92.8 bits (229), Expect = 5.070e-18 Identity = 68/210 (32.38%), Postives = 99/210 (47.14%), Query Frame = 2 Query: 266 VWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLTLLGAQVTMTDLPEALPILRHNTDATFATLNDNEGHGDNNNDRNSLVGRENHDHAADRRSCSRPTIRELCWGNVAEAGEVAAAVAAVDGEGSEWEGFDLIVGADVIYNEPTFPALLSTLSDRRLCSENTLVYLATMLRGGRHEG-FLEMLNLNGFRVRALDPTCADDL 892 VWE A+ + FF+++R RGR V+E+GAGTG+VG+ LLG VT+TDLP AL +R N R ++ G + +RP +R L WG +G+ G+D+++GADV+Y +FPALL+TL R LC ++ +L +R G F E L FR L +D+ Sbjct: 43 VWEGALALCRFFEEQRLD----FRGRTVIELGAGTGIVGILAALLGGDVTITDLPVALDQIRENV-------------------RRNVPGGP---------TATRPQVRALEWGQ---------------DQGAFPRGYDVVLGADVVYEPRSFPALLATL--RHLCGPRSVAFLCCGMRRELGAGVFFETLLPRHFRTELLRRDAEEDV 203
BLAST of mRNA_Ecto-sp13_S_contig10044.67.1 vs. uniprot
Match: A0A2I4DCE8_9TELE (protein N-lysine methyltransferase METTL21A isoform X2 n=2 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4DCE8_9TELE) HSP 1 Score: 91.3 bits (225), Expect = 2.010e-17 Identity = 70/211 (33.18%), Postives = 95/211 (45.02%), Query Frame = 2 Query: 239 WEVNNFSNTVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLTLLGAQVTMTDLPEALPILRHNTDATFATLNDNEGHGDNNNDRNSLVGRENHDHAADRRSCSRPTI-RELCWGNVAEAGEVAAAVAAVDGEGSEWEGFDLIVGADVIYNEPTFPALLSTLSDRRLCSENTLVYLATMLRGGRHEGFLEMLNLNGFRVRAL 868 W+ + VW+AA+ M + + + L+G+RV+E+GAGTGLVG+ LLGA VT+TD AL L N +A + +P + EL WG E GFDL++GAD+IY E TFP+L+ TL LCS+ T V LA +R R FL ML GF V + Sbjct: 37 WKKLGVAAVVWDAAVVMCMYLELGKVE----LKGKRVIELGAGTGLVGIVAALLGAHVTITDREPALDFLSANVEANLTP------------------------------APQQPVVVSELTWGVALERYPAG--------------GFDLVLGADIIYLEDTFPSLIRTLE--HLCSDATAVLLACKIRYERDTNFLSMLK-RGFHVEEV 196
BLAST of mRNA_Ecto-sp13_S_contig10044.67.1 vs. uniprot
Match: A0A3Q2FTR5_CYPVA (Methyltransferase like 21A n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2FTR5_CYPVA) HSP 1 Score: 91.3 bits (225), Expect = 2.010e-17 Identity = 67/200 (33.50%), Postives = 94/200 (47.00%), Query Frame = 2 Query: 239 WEVNNFSNTVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLTLLGAQVTMTDLPEALPILRHNTDATFATLNDNEGHGDNNNDRNSLVGRENHDHAADRRSCSRPTIRELCWGNVAEAGEVAAAVAAVDGEGSEWEGFDLIVGADVIYNEPTFPALLSTLSDRRLCSENTLVYLATMLRGGRHEGFLEML 838 W + VW+AA+ + + + L+GR+ +E+GAGTGLVG+ L+GA VT+TD AL +L N +A + R+S+V + EL WG + GFDL++GAD++Y E TFP+LL TL LCSENT+V LA +R R FL ML Sbjct: 37 WRRLGVAAVVWDAAVVLCMYLE----LGAVELKGRKAIELGAGTGLVGIVAALMGANVTITDRQPALELLSANVEANLPPES-----------RSSVV------------------VSELTWGQGLQRFPQG--------------GFDLVLGADIVYLEETFPSLLQTLE--HLCSENTIVLLACKIRYERDTDFLSML 187
BLAST of mRNA_Ecto-sp13_S_contig10044.67.1 vs. uniprot
Match: A0A8D2LZW9_VARKO (Methyltransferase like 21A n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2LZW9_VARKO) HSP 1 Score: 90.5 bits (223), Expect = 3.740e-17 Identity = 72/219 (32.88%), Postives = 98/219 (44.75%), Query Frame = 2 Query: 239 WEVNNFSNTVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLTLLGAQVTMTDLPEALPILRHNTDATF-ATLNDNEGHGDNNNDRNSLVGRENHDHAADRRSCSRPTIRELCWGNVAEAGEVAAAVAAVDGEGSEWEGFDLIVGADVIYNEPTFPALLSTLSDRRLCSENTLVYLATMLRGGRHEGFLEMLNLNGFRVRALDPTCADDL 892 W + VW+AA+ + F + L+G V+E+GAGTGL+G+ TLLGA VT+TD ALP+L N A A L R ++EL WG D G+D I+GAD+IY E TF LL TL LCS+ T++ L+ LR R + FLEML F VR + ++D+ Sbjct: 37 WNQLGVAAVVWDAAVVLCTFLEMRGID----LQGSLVIELGAGTGLLGIVATLLGAHVTITDRKAALPLLEANVQANLPAELQ------------------------------PRAVVKELTWGQ--------------DLANFSPGGYDFILGADIIYLEETFMDLLQTLD--HLCSDQTVILLSCRLRYERDQNFLEMLR-GRFSVREVFYDASNDV 204
BLAST of mRNA_Ecto-sp13_S_contig10044.67.1 vs. uniprot
Match: A0A8B9RWZ0_9AVES (EEF1A lysine methyltransferase 3 n=2 Tax=Accipitrinae TaxID=8955 RepID=A0A8B9RWZ0_9AVES) HSP 1 Score: 90.5 bits (223), Expect = 5.440e-17 Identity = 70/224 (31.25%), Postives = 101/224 (45.09%), Query Frame = 2 Query: 263 TVWEAAIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLTLLGAQVTMTDLPEALPILRHNTDATFATLNDNEGHGDNNNDRNSLVGRENHDHAADRRSCSRPTIRELCWGNVAEAGEVAAAVAAVDGEGSEWEGFDLIVGADVIYNEPTFPALLSTLSDRRLCSENTLVYLATMLRGG---RHEGFLEMLNLNGFRVRALDPTCADDL---RARVSGDD 916 +VWEAA+ + + +++R RGR V+E+GAGTG+VG+ LLG VT+TD P AL +R N F EG RP +R L WG EGS +++I+G+D++Y+ P+FP LL TL R LC + L +RGG F +ML FR++ L +++ R GDD Sbjct: 43 SVWEAALSLCRYLEEQRFD----FRGRTVIELGAGTGIVGILAALLGGDVTITDQPAALDQIRENVRLNFPA----EG--------------------------GRPRVRALLWGQ---------------DEGSFRPEYEVILGSDIVYHPPSFPPLLGTL--RHLCGPRSFALLCAKMRGGDAGARRFFRQMLPPY-FRIQLLRREAEEEIEIYRVTRRGDD 214
BLAST of mRNA_Ecto-sp13_S_contig10044.67.1 vs. uniprot
Match: UPI0011B74753 (protein N-lysine methyltransferase METTL21A isoform X4 n=2 Tax=Gadus morhua TaxID=8049 RepID=UPI0011B74753) HSP 1 Score: 90.1 bits (222), Expect = 5.800e-17 Identity = 72/205 (35.12%), Postives = 95/205 (46.34%), Query Frame = 2 Query: 239 WEVNNFSNTVWEA-----AIWMHHFFQDERCFPPGWLRGRRVLEIGAGTGLVGLTLTLLGAQVTMTDLPEALPILRHNTDATFATLNDNEGHGDNNNDRNSLVGRENHDHAADRRSCSRPTIRELCWGNVAEAGEVAAAVAAVDGEGSEWEGFDLIVGADVIYNEPTFPALLSTLSDRRLCSENTLVYLATMLRGGRHEGFLEML 838 W + + VW+A A+ + + + P LRGR V+E+GAGTGLVG+ LLGA+VT+TD AL +L N A AD R S + EL WG+ E GFDL++GAD++Y E TFPALL+TL LCS+ T V LA +R R FLE+L Sbjct: 37 WRKSGVAAVVWDAVSYTRAVVLALYLE----LAPVELRGRPVIELGAGTGLVGIVAALLGARVTITDREPALELLSANVRANVP---------------------------ADLRPGSAE-VSELSWGSGLERYPAG--------------GFDLVLGADIVYLEDTFPALLATLD--HLCSDTTAVLLACKIRYERDSRFLELL 193 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10044.67.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10044.67.1 >prot_Ecto-sp13_S_contig10044.67.1 ID=prot_Ecto-sp13_S_contig10044.67.1|Name=mRNA_Ecto-sp13_S_contig10044.67.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=459bp MPIANHDTEPEGDGEGSSDSLDDLFSEIWERESQPELRFAIIGVGSVVQTback to top mRNA from alignment at Ecto-sp13_S_contig10044:129..3673+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10044.67.1 ID=mRNA_Ecto-sp13_S_contig10044.67.1|Name=mRNA_Ecto-sp13_S_contig10044.67.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3545bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10044:129..3673+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10044:129..3673+ >mRNA_Ecto-sp13_S_contig10044.67.1 ID=mRNA_Ecto-sp13_S_contig10044.67.1|Name=mRNA_Ecto-sp13_S_contig10044.67.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1377bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10044:129..3673+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |