mRNA_Ecto-sp13_S_contig10043.66.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10043.66.1 vs. uniprot
Match: D7FKU3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU3_ECTSI) HSP 1 Score: 532 bits (1370), Expect = 1.010e-187 Identity = 259/275 (94.18%), Postives = 264/275 (96.00%), Query Frame = 1 Query: 1 MPSGGSSGESQASREHREPADEWLRQRRLRSQASAEGHESCPLIYTVDAKTAKEHGLLLFQEELELLGTVTARLCRCLCHSPVAHTQDHPQGHRRTAFAAASDSGHKSAKAERPHRRLGVCEGEAHALMLEEMLKGANVVISGDSGWFYRWFESMQDAYARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDLHPMMVTFDGCVRGDDAQSAGDDYRHGGRLLIIPEDV 825
MPSGG SG SQASR+HRE ADEWLRQRRLR Q SAEGHESCPLIYTVDAKTAK+HGLLLFQEELELLGTVTARLCRCLCHSPV HTQDHPQG RRTAFAAASDSGHKSA+AERPHRRLGVCEGEAHALMLEEMLKGANVVISGDSGWFYRWFESMQDAYARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDL PMMVTFDGCVR +DAQS GDD RHGGRLLI+PEDV
Sbjct: 192 MPSGGFSGGSQASRQHRERADEWLRQRRLRPQGSAEGHESCPLIYTVDAKTAKKHGLLLFQEELELLGTVTARLCRCLCHSPVVHTQDHPQGQRRTAFAAASDSGHKSAEAERPHRRLGVCEGEAHALMLEEMLKGANVVISGDSGWFYRWFESMQDAYARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDLQPMMVTFDGCVRRNDAQSDGDDSRHGGRLLIVPEDV 466
BLAST of mRNA_Ecto-sp13_S_contig10043.66.1 vs. uniprot
Match: A0A6G0XQ13_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQ13_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.280e-31 Identity = 56/119 (47.06%), Postives = 84/119 (70.59%), Query Frame = 1 Query: 385 MLEEMLKGANVVISGDSGWFYRWFESMQ-DAYARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDLHPMMVTF 738
++ E++KGA+V+I D+G FY F+++ D Y+R SH+S G+P+G++L T+LTGT DSWFQ EGA W PF+ P+D+ H N+++YK+R QVGPLG S+HTD +P+ + F
Sbjct: 133 LMMEVVKGAHVIIENDNGRFYELFKTISSDTYSRISSHYSNDVQYGVPQGSLLDTLLTGTTSANDSWFQFEGANWDPFQRPVDSFLHCLNYIEYKIRGVQVGPLGTSSHTDRNPLRIPF 251
BLAST of mRNA_Ecto-sp13_S_contig10043.66.1 vs. uniprot
Match: A0A485LSE4_9STRA (Aste57867_25159 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSE4_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.270e-29 Identity = 54/119 (45.38%), Postives = 80/119 (67.23%), Query Frame = 1 Query: 385 MLEEMLKGANVVISGDSGWFYRWFESMQDA-YARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDLHPMMVTF 738
++ E++KGA+V++ D G +Y F+++ Y+R SHFS +P+G +L T+LTGT + DSWFQ EGA W PF P+D+V H N+++YK+R QVGPLG S HTD +P+ + F
Sbjct: 144 LMMEVVKGAHVIVENDQGRYYELFKTISTTTYSRISSHFSIDVQYAVPQGYLLDTLLTGTTSHNDSWFQFEGANWDPFERPVDSVIHCLNYIEYKIRGVQVGPLGTSLHTDSNPLRIAF 262
BLAST of mRNA_Ecto-sp13_S_contig10043.66.1 vs. uniprot
Match: A0A418APD3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418APD3_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.290e-28 Identity = 55/119 (46.22%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 385 MLEEMLKGANVVISGDSGWFYRWFESMQDA-YARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDLHPMMVTF 738
++ E++KGA+VV+ D G FY F+S+ + Y+R SHFS +P+G +L T+LTGT DSWFQ EGA W P P+D++ H N+++YK+R QVGPLG S HTD +P+ + F
Sbjct: 163 LMMEIVKGAHVVVENDQGRFYELFKSISTSTYSRISSHFSNNVQYSVPQGYLLDTLLTGTTSNNDSWFQFEGANWDPLGRPLDSLIHCLNYIEYKIRGVQVGPLGTSMHTDRNPLRIPF 281
BLAST of mRNA_Ecto-sp13_S_contig10043.66.1 vs. uniprot
Match: A0A1V9ZX75_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX75_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.720e-28 Identity = 52/123 (42.28%), Postives = 81/123 (65.85%), Query Frame = 1 Query: 376 HALMLEEMLKGANVVISGDSGWFYRWFESMQ-DAYARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDLHPMMVTFD 741
H +L E++KGA+V++ D G +Y F+++ Y+R SH+S +P+G +L T+LTG + DSWFQ EGA W P PID++ H N+++YK+R Q+GPLG S HTD +P+++ F+
Sbjct: 126 HGKVLMEIMKGAHVIVENDQGRYYELFKNISCTTYSRISSHYSIDVQYAVPQGPLLDTLLTGRTVTNDSWFQFEGANWDPIDRPIDSMLHVLNYVEYKIRGVQIGPLGTSKHTDRNPLLIPFE 248
BLAST of mRNA_Ecto-sp13_S_contig10043.66.1 vs. uniprot
Match: W4HC53_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HC53_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.010e-28 Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 1 Query: 385 MLEEMLKGANVVISGDSGWFYRWFESMQDA-YARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDLHPMMVTFD 741
++ E++KGA+VV+ D G FY F ++ + Y+R SHFS G+P+G +L T+LTGT DSWFQ EGA W P P+D+ H N+++YK+R QVGPLG S +TD +P+ + FD
Sbjct: 136 LMMEIVKGAHVVVENDQGRFYELFRTISTSTYSRISSHFSNDVQYGVPQGYLLDTLLTGTTSGNDSWFQFEGANWDPIGRPVDSFIHCLNYIEYKIRGVQVGPLGTSMYTDQNPLRIPFD 255
BLAST of mRNA_Ecto-sp13_S_contig10043.66.1 vs. uniprot
Match: A0A1V9ZMZ5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMZ5_9STRA) HSP 1 Score: 117 bits (292), Expect = 9.670e-28 Identity = 53/120 (44.17%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 385 MLEEMLKGANVVISGDSGWFYRWFESMQDA-YARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDLHPMMVTFD 741
+L E+LKGA+VV+ D+G FY +++ Y R SH S + +P+G +L T+LTGT + DSWFQ EGA W P P+D++ H N+++YK+R Q+GPLG S HTD P+ + F+
Sbjct: 126 VLMELLKGAHVVVENDAGVFYGLLKNISTTTYPRISSHVSVATQYAVPQGPLLDTLLTGTTLSNDSWFQFEGANWDPVERPVDSMLHVLNYVEYKIRGVQIGPLGTSEHTDRSPLRIRFE 245
BLAST of mRNA_Ecto-sp13_S_contig10043.66.1 vs. uniprot
Match: A0A067CQE6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQE6_SAPPC) HSP 1 Score: 115 bits (288), Expect = 4.140e-27 Identity = 52/123 (42.28%), Postives = 78/123 (63.41%), Query Frame = 1 Query: 376 HALMLEEMLKGANVVISGDSGWFYRWFESMQ-DAYARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDLHPMMVTFD 741
H+ +L E++KGA+V++ D G +Y F ++ Y R SH S S +P+G +L T+LTG + SWFQ EGA W P PID++ H N+++YK+R Q+GPLG S HTD +P+ + F+
Sbjct: 129 HSKVLMEIVKGAHVIVENDHGTYYELFRNITATTYTRISSHASIVSQYAVPQGPLLETLLTGVTAEKHSWFQFEGANWDPIDRPIDSILHVLNYLEYKVRGVQIGPLGTSLHTDRNPLRIRFE 251
BLAST of mRNA_Ecto-sp13_S_contig10043.66.1 vs. uniprot
Match: A0A836C7N5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N5_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.850e-25 Identity = 56/129 (43.41%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 112 HESCPLIYTVDAKTAKEHGLLLFQEELELLGTVTARLCRCLCHSPVAHTQDHPQGHRRTAFAAASDSGHKSAKAERPHRRLGVCEGEAHALMLEEMLKGANVVISGDSGWFYRWFESMQDAYARTCSHF 498
H SCPL+YT+ A AK +GL L +EEL+LLGT+ R+C+C+C + + GH HR L VC+ A + E+L+GANVV+ GD GW+YRWF+ MQDAY RT SH+
Sbjct: 188 HSSCPLLYTLSAAKAKTYGLSLAEEELQLLGTLMVRICKCVCPFQLPESATQLAGHLPG------------------HRVLRVCDESAGTVA--EILRGANVVVDGDGGWYYRWFQRMQDAYKRTSSHY 296
BLAST of mRNA_Ecto-sp13_S_contig10043.66.1 vs. uniprot
Match: A0A1V9ZN05_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZN05_9STRA) HSP 1 Score: 108 bits (270), Expect = 9.810e-25 Identity = 50/120 (41.67%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 385 MLEEMLKGANVVISGDSGWFYRWFESMQDA-YARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDLHPMMVTFD 741
+L+++L+GA+VV++ D G++Y F ++ A + R SHFST L +P+G +L T+L G + DSWFQLEG+ W P P+D++ H N+++Y + QVGPLG S TD P+ + D
Sbjct: 115 LLQDILRGAHVVVAYDRGFYYDLFRNLSTAVHTRQSSHFSTAPQLAVPQGPLLNTLLMGKTIEHDSWFQLEGSTWDPISRPMDSLVHVLNYLEYCVGGVQVGPLGTSPFTDRFPLRLAHD 234 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10043.66.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10043.66.1 >prot_Ecto-sp13_S_contig10043.66.1 ID=prot_Ecto-sp13_S_contig10043.66.1|Name=mRNA_Ecto-sp13_S_contig10043.66.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=276bp MPSGGSSGESQASREHREPADEWLRQRRLRSQASAEGHESCPLIYTVDAKback to top mRNA from alignment at Ecto-sp13_S_contig10043:2812..6036- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10043.66.1 ID=mRNA_Ecto-sp13_S_contig10043.66.1|Name=mRNA_Ecto-sp13_S_contig10043.66.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10043:2812..6036- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10043:2812..6036- >mRNA_Ecto-sp13_S_contig10043.66.1 ID=mRNA_Ecto-sp13_S_contig10043.66.1|Name=mRNA_Ecto-sp13_S_contig10043.66.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=828bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10043:2812..6036- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |