mRNA_Ecto-sp13_S_contig10038.58.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10038.58.1 vs. uniprot
Match: A0A6H5KQK5_9PHAE (PSP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQK5_9PHAE) HSP 1 Score: 627 bits (1617), Expect = 4.860e-215 Identity = 351/358 (98.04%), Postives = 353/358 (98.60%), Query Frame = 1 Query: 1 SVSQAKQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISPDLREALGIGEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKSHWGDLAESDXXXXXXXXXXXXXXXXXXXGAETPMFEGGGVSSVSGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGLSGDASEAPPRDVQVSLNPDEVDEQLNDEEGLREKFEEQERAAASVGGAKGKEDVSDIVAEENRKRXXXXXXXXXXKAADKGKRYKDSFKF 1074 S +AKQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHIS DLREALGIGEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKSHWGDLAESDXXXXXXXXXXXXXXXXXXX AETPMFEGGGVSSVSGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGL GDA+EAPPRDVQVSLNPDEVDEQLNDEEGLREKFEEQERAAASVGGAKGKEDVSDIVAEENRKRXXXXXXXXXXKAADKGKRYKDSFKF Sbjct: 310 SQKKAKQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISSDLREALGIGEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKSHWGDLAESDXXXXXXXXXXXXXXXXXXXXAETPMFEGGGVSSVSGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGLGGDATEAPPRDVQVSLNPDEVDEQLNDEEGLREKFEEQERAAASVGGAKGKEDVSDIVAEENRKRXXXXXXXXXXKAADKGKRYKDSFKF 667
BLAST of mRNA_Ecto-sp13_S_contig10038.58.1 vs. uniprot
Match: A0A7S2W121_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W121_9STRA) HSP 1 Score: 300 bits (768), Expect = 8.440e-90 Identity = 181/328 (55.18%), Postives = 231/328 (70.43%), Query Frame = 1 Query: 1 SVSQAKQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISPDLREALGIGEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKSHWGDLA----ESDXXXXXXXXXXXXXXXXXXXGAETPMFEGGGVSSVSGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGLSGDASEAPPRDVQVSLNPDEVDEQLNDEEGLREKFEEQERAAASVGGAKGKEDVSD 972 +++ AKQK R RV PKMGKIDIDYQVLHDAFFK+Q KP LT GD+YYEGKEFE K +E KPG ++ L+ ALG+ E+ PPPWLINMQRYGPP +YP+L+IPGLNAPIP GA +G+ WGKPPVD PLYGDVF A + D +D+S WG+L ES XXXXXXXXXXXXXXX G +TP E G S VSGLETP++++DLRKRAG DTPDT+G+ + P+ELY+VVQ + + VGAG +FG D+KYVLP G SGD V V+LNP++++ Q+++E+ L++ +E+ GGA+G +S+ Sbjct: 211 ALASAKQKGRGRVQPKMGKIDIDYQVLHDAFFKYQNKPSLTLHGDIYYEGKEFEVKLREKKPGLLTEQLKHALGMPENAPPPWLINMQRYGPPPAYPNLKIPGLNAPIPEGASFGYHPGGWGKPPVDEYNRPLYGDVFGRAEPEAADQVLVDRSLWGELGSEDEESXXXXXXXXXXXXXXXXDDMSGLDTPSTEAGMSSVVSGLETPESVVDLRKRAGTDTPDTSGILSAPKELYQVVQEKSAKVGAG-VFGTDKKYVLP---------TGGSGD--------VAVALNPEQLESQVSNEDFLKKSYED--------GGAEGDAGLSE 512
BLAST of mRNA_Ecto-sp13_S_contig10038.58.1 vs. uniprot
Match: A0A836CFT2_9STRA (Proline-rich spliceosome-associated family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT2_9STRA) HSP 1 Score: 298 bits (763), Expect = 1.290e-88 Identity = 193/353 (54.67%), Postives = 233/353 (66.01%), Query Frame = 1 Query: 13 AKQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISPDLREALGIGEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKSHWGDLAESDXXXXXXXXXXXXXXXXXXXGAETPMFEGGGV-SSVSGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGLSGDASEAPPR---DVQVSLNPDEVDEQLNDEEGLREKFEEQERAAASVGGAKGKEDVSDIVAEENRKRXXXXXXXXXXKAADKGKRYK 1059 AKQ+ RERV PKMGKIDIDYQVLHDAFFK QTKP +T+ GDLY+EGKEFE + +E KPG +S +LR ALG+ + PPPWLINMQRYGPP SYPHLRIPGL+APIP GA +G+ WGKPPV+ G PLYGDVF + ++ +D+SHWG++AE XXXXXXXXXXXXXX E P G SS++GLETPD ++DLRKR G++TP G A P+ELY VV + VG GALFG D++Y + GGAA DV VS+NPDE++ QL D E LRE++E +AA +EDVSDIVAEE RKR AA K K +K Sbjct: 239 AKQRSRERVQPKMGKIDIDYQVLHDAFFKWQTKPHMTSVGDLYFEGKEFEVRLREKKPGQLSEELRAALGMPDGAPPPWLINMQRYGPPPSYPHLRIPGLSAPIPPGASFGYHPGGWGKPPVNEAGVPLYGDVFGTMGVE-EEAAAIDRSHWGEMAEXXXXXXXXXXXXXXXXGGAGALTEAPPTPMEGTESSMTGLETPDALLDLRKR-GLETPSDIGTPA-PRELYTVVGETSAGVG-GALFGADKRYAV-------GGAAXXXXXXXXXXXXXAADVAVSINPDEIEAQLEDAEALRERYEASLQAARPE-----REDVSDIVAEEARKRKRKLEKGKERAAAKKSKDFK 575
BLAST of mRNA_Ecto-sp13_S_contig10038.58.1 vs. uniprot
Match: A0A7S2HBQ5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HBQ5_9STRA) HSP 1 Score: 288 bits (737), Expect = 7.570e-88 Identity = 170/293 (58.02%), Postives = 211/293 (72.01%), Query Frame = 1 Query: 13 AKQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISPDLREALGIGEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKSHWGDLAESDXXXXXXXXXXXXXXXXXXX-GAETPMFEGGGVSSVSGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGLSGDASEAPPRDVQVSLNPDEVDEQLNDE 888 +KQK R +V PK G+IDIDYQVLHDAFFK+QTKP LT GD+YYEGKEFE K +E KPG +S L+ ALG+ E+ PPPWLINMQRYGPP SYP+L+IPGLNAPIP G+++G+ WGKPPVD G PLYGDVF A D +++D++ WGDL +XXXXXXXXXXXXXXX G ETP E G S SGL+TP+++ DLRKRAG DTPDT+G+++ P+ELY+VVQ + VGAG LFG D+KY +P SE DVQV+LNPD++ + ++DE Sbjct: 5 SKQKMRAKVTPKTGRIDIDYQVLHDAFFKYQTKPQLTLHGDMYYEGKEFEVKLREKKPGLLSSGLKTALGMPENAPPPWLINMQRYGPPPSYPNLKIPGLNAPIPEGSQFGYHPGGWGKPPVDEMGRPLYGDVFGQADPAAHDEQQVDRALWGDLGSDEXXXXXXXXXXXXXXXTTDVSGLETPSTEAGISSVTSGLDTPESI-DLRKRAGTDTPDTSGIASAPKELYQVVQEKQVRVGAG-LFGTDKKYSMP----------------SE----DVQVALNPDQLSQGVSDE 275
BLAST of mRNA_Ecto-sp13_S_contig10038.58.1 vs. uniprot
Match: A0A7S3XPZ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPZ4_HETAK) HSP 1 Score: 292 bits (747), Expect = 8.430e-88 Identity = 199/362 (54.97%), Postives = 242/362 (66.85%), Query Frame = 1 Query: 1 SVSQAKQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISPDLREALGI-GEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKSHWGDLAESDXXXXXXXXXXXXXXXXXXX-GAETPMFEGG-GVSSV-SGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGLSGDASEAPPRDVQVSLNPDEVDEQLNDEEGLREKFEEQERAAASVGGAKGKEDVSDIVAEENRKRXXXXXXXXXXKAADKGKRYKDSFKF 1074 ++ +AKQKQRERV PKMGKIDIDYQVLHDAFFK QTKP +T G+LYYEGKEFE + ++ PG +S LREALG+ GE PPPWL+NMQRYGPP SYP LRIPGL AP+P GA +G+ + WGKPPVD G PLYGDVF DG++ E D++HWG+L E XXXXXXXXXXXXXXX G ETP+ + G++SV SGLETP + DLRKRAG+DTP+T LSAVP++LYKVVQ + A AG APP +VQV+LNPD+++EQL D LRE++E Q + S +EDVSDI+A+E RKR + A K K+YKD FKF Sbjct: 115 AMKRAKQKQRERVQPKMGKIDIDYQVLHDAFFKWQTKPRMTTHGELYYEGKEFEVRLRDKMPGALSQPLREALGMEGETAPPPWLVNMQRYGPPPSYPRLRIPGLTAPLPPGAAFGYHTGGWGKPPVDETGRPLYGDVFGTEG-DGEEAEAQDRAHWGELEEXXXXXXXXXXXXXXXXXADDASGLETPLDDAATGLTSVTSGLETPGAL-DLRKRAGLDTPETP-LSAVPKDLYKVVQ--EQAADAGXXXXXXXXXXXX-----------XXXXXXTAPP-EVQVALNPDQLEEQLGDAAALREQYELQMESQRSD-----REDVSDIMADEARKRKRKLEK----QKAGKEKKYKD-FKF 449
BLAST of mRNA_Ecto-sp13_S_contig10038.58.1 vs. uniprot
Match: A0A7S2MJ71_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MJ71_9STRA) HSP 1 Score: 288 bits (737), Expect = 6.910e-85 Identity = 170/293 (58.02%), Postives = 211/293 (72.01%), Query Frame = 1 Query: 13 AKQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISPDLREALGIGEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKSHWGDLAESDXXXXXXXXXXXXXXXXXXX-GAETPMFEGGGVSSVSGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGLSGDASEAPPRDVQVSLNPDEVDEQLNDE 888 +KQK R +V PK G+IDIDYQVLHDAFFK+QTKP LT GD+YYEGKEFE K +E KPG +S L+ ALG+ E+ PPPWLINMQRYGPP SYP+L+IPGLNAPIP G+++G+ WGKPPVD G PLYGDVF A D +++D++ WGDL +XXXXXXXXXXXXXXX G ETP E G S SGL+TP+++ DLRKRAG DTPDT+G+++ P+ELY+VVQ + VGAG LFG D+KY +P SE DVQV+LNPD++ + ++DE Sbjct: 240 SKQKMRAKVTPKTGRIDIDYQVLHDAFFKYQTKPQLTLHGDMYYEGKEFEVKLREKKPGLLSSGLKTALGMPENAPPPWLINMQRYGPPPSYPNLKIPGLNAPIPEGSQFGYHPGGWGKPPVDEMGRPLYGDVFGQADPAAHDEQQVDRALWGDLGSDEXXXXXXXXXXXXXXXTTDVSGLETPSTEAGISSVTSGLDTPESI-DLRKRAGTDTPDTSGIASAPKELYQVVQEKQVRVGAG-LFGTDKKYSMP----------------SE----DVQVALNPDQLSQGVSDE 510
BLAST of mRNA_Ecto-sp13_S_contig10038.58.1 vs. uniprot
Match: A0A812UK03_SYMMI (SF3B2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK03_SYMMI) HSP 1 Score: 273 bits (698), Expect = 1.170e-81 Identity = 188/378 (49.74%), Postives = 241/378 (63.76%), Query Frame = 1 Query: 1 SVSQAKQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISPDLREALGIGEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDV-EEMDKSHWGDLAESDXXXXXXXXXXXXXXXXXXX----------------GAETPMFEGGGVSSVSGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGLSGDASEAPPRDVQVSLNPDEVDEQLND---EEGLREKFEEQERAAASVGGAKGKEDVSDIVAEENRKRXXXXXXXXXXKAADKGKRYKDSFKF 1074 ++ + KQKQR+++ PKMGKIDIDYQVLHDAFFK+QTKP ++ GDLYYEGKE+E +E KPG +S +L ALG+ E+ PPPWLINMQRYGPP SYP LRIPGLNAPIP GA YG+ WGKPPVD G PLYGDVF A++ V E +D+SHWG+L + XXXXXXXXXXXXXXXX G ETP+ G S VSGLETPDT+ DLRKR GV+TPD G +ELYKV+Q R + +G FG DR YVL G GA V+VS+NPD+++ ++++ +EGLR +E Q A+ G + ++D +D ++ ++R ++ + KR+KD FKF Sbjct: 29 ALKKGKQKQRDKMTPKMGKIDIDYQVLHDAFFKYQTKPKMSGHGDLYYEGKEYEVDMKEKKPGVLSEELITALGMLENAPPPWLINMQRYGPPPSYPSLRIPGLNAPIPEGASYGYHPGGWGKPPVDEYGRPLYGDVFGTYAQEDHAVLESIDRSHWGELGAASSESXXXXXXXXXXXXXXXXXXXXXRREYGGEADSSGIETPLSLDGMSSVVSGLETPDTI-DLRKREGVETPDPGG----HRELYKVIQERKTQGNSGQFFGSDRGYVL------GKGA--------------VEVSINPDQLESEVSELGHKEGLRGTYEAQ---LAAQGEGEYEDDRNDDPRQKRKRRA---------ESGAQSKRHKD-FKF 368
BLAST of mRNA_Ecto-sp13_S_contig10038.58.1 vs. uniprot
Match: A0A7S0NUG2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NUG2_9EUKA) HSP 1 Score: 253 bits (647), Expect = 1.470e-74 Identity = 177/341 (51.91%), Postives = 218/341 (63.93%), Query Frame = 1 Query: 22 KQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISPDLREALGIGEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKSH--WGDLAESDXXXXXXXXXXXXXXXXXXXGAETPMFE--GGGVSSVS----GLETPDTMMDLRKRA------GVDTPDTTGLSAVPQ-ELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGLSGDASEAPPRDVQVSLNPDEVDEQLNDEEGLREKFEEQERAAASVGGAKGKEDVSDIVAEENRKR 999 KQ+ER+ PKMGKIDIDYQVLHDAFFK+QTKP L+ GD YYEGKE EA +E KPG +S L +ALG+ PPPWL+NMQRYGPP SYP+L+IPGLNAPIP GA YG+ WGKPPVD G PLYGDVF AA + +D + + S WG + E D XXXXXXXXXXXXXX + + G+SSVS GL TPD++ LRK A GVDTP+++ +S+ P +L++VV+ RDS VG GA FG Y LP SK A + V V+L+P E+ E+L DE L+ ++EEQ A EDVSDI+ E+ RKR Sbjct: 7 KQKERMQPKMGKIDIDYQVLHDAFFKYQTKPRLSGHGDTYYEGKEQEAVLREKKPGQVSEALSKALGMEAGGPPPWLVNMQRYGPPPSYPNLKIPGLNAPIPEGASYGYHPGGWGKPPVDEFGRPLYGDVFGTAAPEPEDQVQANFSRDAWGAMEEGDDEEDXXXXXXXXXXXXXXDDRSSVTEDEINAGISSVSSVPSGLATPDSL-HLRKGADGIVTPGVDTPESSSVSSQPPPQLFQVVEQRDSRVG-GAAFGSSHTYNLPTSKG-----------APKTAQGGVAVALDPAEL-EKL-DEATLKARYEEQRNAEREANAP---EDVSDIIEEQERKR 329
BLAST of mRNA_Ecto-sp13_S_contig10038.58.1 vs. uniprot
Match: A0A8J9WSR4_9CHLO (Splicing factor 3B subunit 2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WSR4_9CHLO) HSP 1 Score: 259 bits (661), Expect = 8.230e-73 Identity = 179/359 (49.86%), Postives = 228/359 (63.51%), Query Frame = 1 Query: 16 KQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISPDLREALGIGEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKS-HWGDLAESDXXXXXXXXXXXXXXXXXXXGAE--TPMFEGGGVSSVSGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAA---GLSGDASEAPPRDVQVSLNPDEVDEQLNDEEGLREKFEEQERAAASVGGAKGKEDVSDIVAEENRKRXXXXXXXXXXKAADKGKRYKDSFKF 1074 +QKQ++++ PKMGK+DIDYQVLHDAFFKHQTKP + GDLYYEGKEFEAK + KPG +S DLR+ALG+GE PPPWLINMQRYGPP SYP L+IPGLNAPIP GA++G+ WGKPPVD +GNPLYGDVF +D DD E +DK+ WGDL + XXXXXXXXXXXXXXX A+ T + G S SG+ETP+ ++DLRK + P LY+V++ + + VG AL G D YV+PG+ A G A S P DV+V+++P E++ D+ G+R +EE+ A A +ED SD+VA + K K K+ K+ FKF Sbjct: 345 RQKQKDKMQPKMGKLDIDYQVLHDAFFKHQTKPSFSVMGDLYYEGKEFEAKIRGAKPGVLSEDLRKALGMGESSPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGAQFGYQPGGWGKPPVDEEGNPLYGDVFGQFEQDADD-ENVDKATRWGDLESEEEXXXXXXXXXXXXXXXTESLADGITSIASGYNSSLPSGIETPE-VIDLRKGKPGERP-----------LYQVLEQQAAPVG-NALMGSDHTYVIPGAGAAAGAGAKXXXXXAKRSGLAPGDVEVAIDPAELE--GLDDAGVRALYEER---LAQQRTASAREDFSDLVAA----KAAQQKRKAAEKKEGKAKKQKEQFKF 680
BLAST of mRNA_Ecto-sp13_S_contig10038.58.1 vs. uniprot
Match: A0A383VJH1_TETOB (PSP domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VJH1_TETOB) HSP 1 Score: 258 bits (658), Expect = 1.340e-72 Identity = 176/365 (48.22%), Postives = 233/365 (63.84%), Query Frame = 1 Query: 16 KQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISPDLREALGIGED-DPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKS-HWGDLAESDXXXXXXXXXXXXXXXXXXXGAETPMFEG---------GGVSSV-SGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGLSGDASEAPPRDVQVSLNPDEVDEQLNDEEGLREKFEEQERAAASVGGAKGKEDVSDIVAEENRKRXXXXXXXXXXKAADKGKRYKDSFKF 1074 KQKQR+R++ K GK+DI Y+VL+DAFFKHQ KP L+ G+LYYEG+E+EA+ + +PG +SP+LREALG+ E PPPWL+NMQRYGPP SYP+L+IPGLNAPIP GA +G+ + WGKPPVD+ GNP+YGDVF LA DG+ E+DK WG+L E + XXXXXXXXX XX E + G G+SS+ SGLETPD ++LRK+ G T SA LY V++ R ++VG G L G D YV+PG++ GA G AP DV+V+L+P+E++ D EG+R +E + AA A+ +ED SD+VA + +AA K+ KD+FKF Sbjct: 308 KQKQRDRMSAKTGKMDIAYEVLYDAFFKHQRKPRLSGLGELYYEGREYEARLEHLRPGVLSPELREALGMSEPASPPPWLVNMQRYGPPPSYPNLKIPGLNAPIPPGASFGYHAGGWGKPPVDAAGNPIYGDVFGLAQDDGESDAEVDKGGRWGELEEYEEEEXXXXXXXXXADXXEGMPDEGDIMAGIATDATGIATGISSLQSGLETPDVALNLRKQ-GDSVAGTE--SAQHPALYTVLEQRKASVGTG-LLGTDHTYVIPGAE----GAKRKPGAPGAAP--DVEVTLSPEELE--GLDNEGIRALYEAKMAAAQQAAKAE-REDFSDMVARHAAAQKRKIAERAETRAA---KKQKDNFKF 656 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10038.58.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10038.58.1 >prot_Ecto-sp13_S_contig10038.58.1 ID=prot_Ecto-sp13_S_contig10038.58.1|Name=mRNA_Ecto-sp13_S_contig10038.58.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=343bp MGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISback to top mRNA from alignment at Ecto-sp13_S_contig10038:1195..5414- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10038.58.1 ID=mRNA_Ecto-sp13_S_contig10038.58.1|Name=mRNA_Ecto-sp13_S_contig10038.58.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4220bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10038:1195..5414- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10038:1195..5414- >mRNA_Ecto-sp13_S_contig10038.58.1 ID=mRNA_Ecto-sp13_S_contig10038.58.1|Name=mRNA_Ecto-sp13_S_contig10038.58.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10038:1195..5414- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |